RNA–Protein interactions for RNA: ENST00000533948.1

SHARPIN-208, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 5

Gene SHARPIN, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-208ENST00000533948 NSD2O96028 1365 aa20.24■□□□□ 0.83
SHARPIN-208ENST00000533948 IP6K1Q92551 441 aa20.24■□□□□ 0.83
SHARPIN-208ENST00000533948 SHANK3Q9BYB0 1731 aa20.24■□□□□ 0.83
SHARPIN-208ENST00000533948 GIGYF1O75420 1035 aaPredicted RBP20.23■□□□□ 0.83
SHARPIN-208ENST00000533948 RGPD2P0DJD1 1756 aa20.23■□□□□ 0.83
SHARPIN-208ENST00000533948 FAM208AQ9UK61 1670 aaKnown RBP20.22■□□□□ 0.83
SHARPIN-208ENST00000533948 ANKRD36BQ8N2N9 1353 aa20.22■□□□□ 0.83
SHARPIN-208ENST00000533948 LY75O60449 1722 aa20.22■□□□□ 0.83
SHARPIN-208ENST00000533948 FBLN1P23142 703 aa20.22■□□□□ 0.83
SHARPIN-208ENST00000533948 PUS7Q96PZ0 661 aaKnown RBP20.22■□□□□ 0.83
SHARPIN-208ENST00000533948 YBX3P16989 372 aaKnown RBP eCLIP20.2■□□□□ 0.82
SHARPIN-208ENST00000533948 MEGF6O75095 1541 aa20.2■□□□□ 0.82
SHARPIN-208ENST00000533948 MAP3K19Q56UN5 1328 aa20.19■□□□□ 0.82
SHARPIN-208ENST00000533948 HOXC9P31274 260 aa20.18■□□□□ 0.82
SHARPIN-208ENST00000533948 COG3Q96JB2 828 aa20.18■□□□□ 0.82
SHARPIN-208ENST00000533948 CCNL1Q9UK58 526 aaPredicted RBP20.18■□□□□ 0.82
SHARPIN-208ENST00000533948 SLC24A1O60721 1099 aa20.17■□□□□ 0.82
SHARPIN-208ENST00000533948 MSL1Q68DK7 614 aa20.17■□□□□ 0.82
SHARPIN-208ENST00000533948 COL23A1Q86Y22 540 aaPredicted RBP20.17■□□□□ 0.82
SHARPIN-208ENST00000533948 ZCRB1Q8TBF4 217 aaKnown RBP20.17■□□□□ 0.82
SHARPIN-208ENST00000533948 CEP350Q5VT06 3117 aa20.16■□□□□ 0.82
SHARPIN-208ENST00000533948 MSH5O43196 834 aa20.16■□□□□ 0.82
SHARPIN-208ENST00000533948 AMPHP49418 695 aa20.16■□□□□ 0.82
SHARPIN-208ENST00000533948 TONSLQ96HA7 1378 aa20.16■□□□□ 0.82
SHARPIN-208ENST00000533948 USHBP1Q8N6Y0 703 aa20.14■□□□□ 0.81
SHARPIN-208ENST00000533948 USP47Q96K76 1375 aa20.12■□□□□ 0.81
SHARPIN-208ENST00000533948 RRS1Q15050 365 aaKnown RBP20.11■□□□□ 0.81
SHARPIN-208ENST00000533948 NBPF6Q5VWK0 638 aa20.11■□□□□ 0.81
SHARPIN-208ENST00000533948 NBPF4Q96M43 638 aa20.11■□□□□ 0.81
SHARPIN-208ENST00000533948 ATP10DQ9P241 1426 aa20.1■□□□□ 0.81
SHARPIN-208ENST00000533948 C5P01031 1676 aa20.1■□□□□ 0.81
SHARPIN-208ENST00000533948 GRIN3BO60391 1043 aa20.1■□□□□ 0.81
SHARPIN-208ENST00000533948 HMGB2P26583 209 aaKnown RBP20.1■□□□□ 0.81
SHARPIN-208ENST00000533948 TESK2Q96S53 571 aa20.09■□□□□ 0.81
SHARPIN-208ENST00000533948 ST20-MTHFSA0A0A6YYL1 179 aa20.08■□□□□ 0.81
SHARPIN-208ENST00000533948 IFFO2Q5TF58 517 aa20.07■□□□□ 0.8
SHARPIN-208ENST00000533948 RTL1A6NKG5 1358 aa20.07■□□□□ 0.8
SHARPIN-208ENST00000533948 AMIGO3Q86WK7 504 aa20.06■□□□□ 0.8
SHARPIN-208ENST00000533948 RAPGEF4Q8WZA2 1011 aa20.06■□□□□ 0.8
SHARPIN-208ENST00000533948 TAF1LQ8IZX4 1826 aa20.06■□□□□ 0.8
SHARPIN-208ENST00000533948 CGNL1Q0VF96 1302 aa20.05■□□□□ 0.8
SHARPIN-208ENST00000533948 SMIM5Q71RC9 77 aa20.05■□□□□ 0.8
SHARPIN-208ENST00000533948 GGNBP2Q9H3C7 697 aa20.05■□□□□ 0.8
SHARPIN-208ENST00000533948 PALLDQ8WX93 1383 aa20.05■□□□□ 0.8
SHARPIN-208ENST00000533948 WWC3Q9ULE0 1092 aa20.04■□□□□ 0.8
SHARPIN-208ENST00000533948 TOGARAM1Q9Y4F4 1720 aa20.03■□□□□ 0.8
SHARPIN-208ENST00000533948 TATP17735 454 aaPredicted RBP20.03■□□□□ 0.8
SHARPIN-208ENST00000533948 ZNF526Q8TF50 670 aaPredicted RBP20.03■□□□□ 0.8
SHARPIN-208ENST00000533948 CD2APQ9Y5K6 639 aa20.03■□□□□ 0.8
SHARPIN-208ENST00000533948 FYB1O15117 783 aa20.02■□□□□ 0.8
SHARPIN-208ENST00000533948 MPRIPQ6WCQ1 1025 aa20.02■□□□□ 0.8
SHARPIN-208ENST00000533948 ADCY9O60503 1353 aa20.02■□□□□ 0.8
SHARPIN-208ENST00000533948 C4BP0C0L5 1744 aa20.02■□□□□ 0.79
SHARPIN-208ENST00000533948 HSP90AB2PQ58FF8 381 aa20.01■□□□□ 0.79
SHARPIN-208ENST00000533948 GPBP1L1Q9HC44 474 aaPredicted RBP20.01■□□□□ 0.79
SHARPIN-208ENST00000533948 SMG6Q86US8 1419 aaKnown RBP20.01■□□□□ 0.79
SHARPIN-208ENST00000533948 PCDH11XQ9BZA7 1347 aa20.01■□□□□ 0.79
SHARPIN-208ENST00000533948 PCDH11YQ9BZA8 1340 aa20.01■□□□□ 0.79
SHARPIN-208ENST00000533948 CYP27B1O15528 508 aa20■□□□□ 0.79
SHARPIN-208ENST00000533948 FLAD1Q8NFF5 587 aa20■□□□□ 0.79
SHARPIN-208ENST00000533948 ITGB4P16144 1822 aa19.99■□□□□ 0.79
SHARPIN-208ENST00000533948 PHF14O94880 888 aa19.99■□□□□ 0.79
SHARPIN-208ENST00000533948 TMF1P82094 1093 aa19.99■□□□□ 0.79
SHARPIN-208ENST00000533948 UBR3Q6ZT12 1888 aa19.99■□□□□ 0.79
SHARPIN-208ENST00000533948 AK7Q96M32 723 aa19.98■□□□□ 0.79
SHARPIN-208ENST00000533948 INSRP06213 1382 aa19.97■□□□□ 0.79
SHARPIN-208ENST00000533948 IGSF1Q8N6C5 1336 aa19.97■□□□□ 0.79
SHARPIN-208ENST00000533948 PCGF6Q9BYE7 350 aa19.96■□□□□ 0.79
SHARPIN-208ENST00000533948 FLT4P35916 1363 aa19.95■□□□□ 0.79
SHARPIN-208ENST00000533948 KIF20BQ96Q89 1820 aa19.95■□□□□ 0.78
SHARPIN-208ENST00000533948 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.95■□□□□ 0.78
SHARPIN-208ENST00000533948 CDCA8Q53HL2 280 aa19.95■□□□□ 0.78
SHARPIN-208ENST00000533948 PIGBQ92521 554 aa19.95■□□□□ 0.78
SHARPIN-208ENST00000533948 SMARCC1Q92922 1105 aaPredicted RBP19.95■□□□□ 0.78
SHARPIN-208ENST00000533948 PKD1L3Q7Z443 1732 aa19.94■□□□□ 0.78
SHARPIN-208ENST00000533948 HSPA6P17066 643 aa19.94■□□□□ 0.78
SHARPIN-208ENST00000533948 MAP2P11137 1827 aaKnown RBP19.93■□□□□ 0.78
SHARPIN-208ENST00000533948 LINC00116Q8NCU8 138 aa19.93■□□□□ 0.78
SHARPIN-208ENST00000533948 EMILIN1Q9Y6C2 1016 aa19.93■□□□□ 0.78
SHARPIN-208ENST00000533948 LOC102724428A0A0B4J2F2 783 aa19.89■□□□□ 0.77
SHARPIN-208ENST00000533948 SIK1P57059 783 aa19.89■□□□□ 0.77
SHARPIN-208ENST00000533948 CLSPNQ9HAW4 1339 aa19.89■□□□□ 0.77
SHARPIN-208ENST00000533948 SPG7Q9UQ90 795 aa19.89■□□□□ 0.77
SHARPIN-208ENST00000533948 NCAPD2Q15021 1401 aa19.88■□□□□ 0.77
SHARPIN-208ENST00000533948 NSD3Q9BZ95 1437 aa19.88■□□□□ 0.77
SHARPIN-208ENST00000533948 KIF24Q5T7B8 1368 aa19.88■□□□□ 0.77
SHARPIN-208ENST00000533948 KIF3CO14782 793 aa19.88■□□□□ 0.77
SHARPIN-208ENST00000533948 PPM1GO15355 546 aaPredicted RBP19.88■□□□□ 0.77
SHARPIN-208ENST00000533948 SSFA2P28290 1259 aa19.88■□□□□ 0.77
SHARPIN-208ENST00000533948 ITPK1Q13572 414 aa19.88■□□□□ 0.77
SHARPIN-208ENST00000533948 GNPATO15228 680 aa19.87■□□□□ 0.77
SHARPIN-208ENST00000533948 NKX1-1Q15270 411 aaPredicted RBP19.87■□□□□ 0.77
SHARPIN-208ENST00000533948 CARD14Q9BXL6 1004 aa19.87■□□□□ 0.77
SHARPIN-208ENST00000533948 ASAP1Q9ULH1 1129 aa19.87■□□□□ 0.77
SHARPIN-208ENST00000533948 TIMELESSQ9UNS1 1208 aa19.87■□□□□ 0.77
SHARPIN-208ENST00000533948 CICQ96RK0 1608 aaPredicted RBP19.86■□□□□ 0.77
SHARPIN-208ENST00000533948 PXDNLA1KZ92 1463 aa19.85■□□□□ 0.77
SHARPIN-208ENST00000533948 KIAA1551Q9HCM1 1747 aa19.85■□□□□ 0.77
SHARPIN-208ENST00000533948 MMP10P09238 476 aa19.84■□□□□ 0.77
SHARPIN-208ENST00000533948 TMOD3Q9NYL9 352 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms