RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 SYTL4Q96C24 671 aaPredicted RBP25.33■■□□□ 1.65
UBXN1-216ENST00000533908 SLC27A3Q5K4L6 730 aa25.32■■□□□ 1.64
UBXN1-216ENST00000533908 SHANK3Q9BYB0 1731 aa25.32■■□□□ 1.64
UBXN1-216ENST00000533908 TMF1P82094 1093 aa25.31■■□□□ 1.64
UBXN1-216ENST00000533908 USHBP1Q8N6Y0 703 aa25.31■■□□□ 1.64
UBXN1-216ENST00000533908 USP47Q96K76 1375 aa25.31■■□□□ 1.64
UBXN1-216ENST00000533908 PNPLA7Q6ZV29 1317 aa25.3■■□□□ 1.64
UBXN1-216ENST00000533908 HSP90AB2PQ58FF8 381 aa25.28■■□□□ 1.64
UBXN1-216ENST00000533908 DOT1LQ8TEK3 1739 aa25.28■■□□□ 1.64
UBXN1-216ENST00000533908 RTL1A6NKG5 1358 aa25.28■■□□□ 1.64
UBXN1-216ENST00000533908 SLC16A10Q8TF71 515 aa25.26■■□□□ 1.63
UBXN1-216ENST00000533908 CARD14Q9BXL6 1004 aa25.26■■□□□ 1.63
UBXN1-216ENST00000533908 TFCP2L1Q9NZI6 479 aa25.25■■□□□ 1.63
UBXN1-216ENST00000533908 MAP3K5Q99683 1374 aa25.25■■□□□ 1.63
UBXN1-216ENST00000533908 LY75O60449 1722 aa25.24■■□□□ 1.63
UBXN1-216ENST00000533908 TRIM26Q12899 539 aaPredicted RBP25.24■■□□□ 1.63
UBXN1-216ENST00000533908 ZNF784Q8NCA9 323 aaPredicted RBP25.23■■□□□ 1.63
UBXN1-216ENST00000533908 TUBGCP6Q96RT7 1819 aa25.23■■□□□ 1.63
UBXN1-216ENST00000533908 QSER1Q2KHR3 1735 aa25.23■■□□□ 1.63
UBXN1-216ENST00000533908 RAPGEF4Q8WZA2 1011 aa25.22■■□□□ 1.63
UBXN1-216ENST00000533908 INSRP06213 1382 aa25.21■■□□□ 1.63
UBXN1-216ENST00000533908 COL24A1Q17RW2 1714 aa25.21■■□□□ 1.63
UBXN1-216ENST00000533908 CCNL1Q9UK58 526 aaPredicted RBP25.21■■□□□ 1.63
UBXN1-216ENST00000533908 CGNL1Q0VF96 1302 aa25.2■■□□□ 1.62
UBXN1-216ENST00000533908 UTRNP46939 3433 aa25.19■■□□□ 1.62
UBXN1-216ENST00000533908 TATP17735 454 aaPredicted RBP25.19■■□□□ 1.62
UBXN1-216ENST00000533908 COL23A1Q86Y22 540 aaPredicted RBP25.18■■□□□ 1.62
UBXN1-216ENST00000533908 EMILIN1Q9Y6C2 1016 aa25.18■■□□□ 1.62
UBXN1-216ENST00000533908 CYP27B1O15528 508 aa25.17■■□□□ 1.62
UBXN1-216ENST00000533908 POLD1P28340 1107 aa25.17■■□□□ 1.62
UBXN1-216ENST00000533908 CDCA8Q53HL2 280 aa25.17■■□□□ 1.62
UBXN1-216ENST00000533908 KLHL34Q8N239 644 aa25.17■■□□□ 1.62
UBXN1-216ENST00000533908 FLT4P35916 1363 aa25.17■■□□□ 1.62
UBXN1-216ENST00000533908 KIF20BQ96Q89 1820 aa25.16■■□□□ 1.62
UBXN1-216ENST00000533908 SMG6Q86US8 1419 aaKnown RBP25.16■■□□□ 1.62
UBXN1-216ENST00000533908 NLGN2Q8NFZ4 835 aa25.15■■□□□ 1.62
UBXN1-216ENST00000533908 KIF24Q5T7B8 1368 aa25.15■■□□□ 1.62
UBXN1-216ENST00000533908 GPR162Q16538 588 aa25.14■■□□□ 1.62
UBXN1-216ENST00000533908 NSD3Q9BZ95 1437 aa25.13■■□□□ 1.61
UBXN1-216ENST00000533908 CHD4Q14839 1912 aa25.13■■□□□ 1.61
UBXN1-216ENST00000533908 PCDH11XQ9BZA7 1347 aa25.12■■□□□ 1.61
UBXN1-216ENST00000533908 PCDH11YQ9BZA8 1340 aa25.12■■□□□ 1.61
UBXN1-216ENST00000533908 MPRIPQ6WCQ1 1025 aa25.12■■□□□ 1.61
UBXN1-216ENST00000533908 MSH5O43196 834 aa25.11■■□□□ 1.61
UBXN1-216ENST00000533908 PPM1GO15355 546 aaPredicted RBP25.09■■□□□ 1.61
UBXN1-216ENST00000533908 MSL1Q68DK7 614 aa25.08■■□□□ 1.61
UBXN1-216ENST00000533908 PALLDQ8WX93 1383 aa25.07■■□□□ 1.6
UBXN1-216ENST00000533908 TOGARAM1Q9Y4F4 1720 aa25.07■■□□□ 1.6
UBXN1-216ENST00000533908 NCAPD2Q15021 1401 aa25.07■■□□□ 1.6
UBXN1-216ENST00000533908 AMIGO3Q86WK7 504 aa25.07■■□□□ 1.6
UBXN1-216ENST00000533908 PELP1Q8IZL8 1130 aaKnown RBP25.07■■□□□ 1.6
UBXN1-216ENST00000533908 NKX1-1Q15270 411 aaPredicted RBP25.06■■□□□ 1.6
UBXN1-216ENST00000533908 PIGBQ92521 554 aa25.06■■□□□ 1.6
UBXN1-216ENST00000533908 EYA1Q99502 592 aa25.06■■□□□ 1.6
UBXN1-216ENST00000533908 C5P01031 1676 aa25.06■■□□□ 1.6
UBXN1-216ENST00000533908 WASHC2AQ641Q2 1341 aa25.06■■□□□ 1.6
UBXN1-216ENST00000533908 SMIM5Q71RC9 77 aa25.05■■□□□ 1.6
UBXN1-216ENST00000533908 TIMELESSQ9UNS1 1208 aa25.05■■□□□ 1.6
UBXN1-216ENST00000533908 ITGB4P16144 1822 aa25.05■■□□□ 1.6
UBXN1-216ENST00000533908 YBX3P16989 372 aaKnown RBP eCLIP25.04■■□□□ 1.6
UBXN1-216ENST00000533908 POLKQ9UBT6 870 aa25.04■■□□□ 1.6
UBXN1-216ENST00000533908 PKD1L3Q7Z443 1732 aa25.03■■□□□ 1.6
UBXN1-216ENST00000533908 TAF1LQ8IZX4 1826 aa25.03■■□□□ 1.6
UBXN1-216ENST00000533908 ANKRD26Q9UPS8 1709 aa25.02■■□□□ 1.6
UBXN1-216ENST00000533908 MAP2P11137 1827 aaKnown RBP25.01■■□□□ 1.59
UBXN1-216ENST00000533908 SMARCC1Q92922 1105 aaPredicted RBP25.01■■□□□ 1.59
UBXN1-216ENST00000533908 SPG7Q9UQ90 795 aa25.01■■□□□ 1.59
UBXN1-216ENST00000533908 C4BP0C0L5 1744 aa24.98■■□□□ 1.59
UBXN1-216ENST00000533908 FLAD1Q8NFF5 587 aa24.98■■□□□ 1.59
UBXN1-216ENST00000533908 POLR3GLQ9BT43 218 aa24.98■■□□□ 1.59
UBXN1-216ENST00000533908 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.98■■□□□ 1.59
UBXN1-216ENST00000533908 GOLGB1Q14789 3259 aaKnown RBP24.98■■□□□ 1.59
UBXN1-216ENST00000533908 TNNT2P45379 298 aaPredicted RBP24.97■■□□□ 1.59
UBXN1-216ENST00000533908 C1QTNF8P60827 252 aa24.97■■□□□ 1.59
UBXN1-216ENST00000533908 PCGF6Q9BYE7 350 aa24.97■■□□□ 1.59
UBXN1-216ENST00000533908 ASAP1Q9ULH1 1129 aa24.97■■□□□ 1.59
UBXN1-216ENST00000533908 EIF4A2Q14240 407 aaKnown RBP24.96■■□□□ 1.59
UBXN1-216ENST00000533908 LINC00116Q8NCU8 138 aa24.96■■□□□ 1.59
UBXN1-216ENST00000533908 LOC102724428A0A0B4J2F2 783 aa24.95■■□□□ 1.58
UBXN1-216ENST00000533908 PHKG2P15735 406 aa24.95■■□□□ 1.58
UBXN1-216ENST00000533908 SIK1P57059 783 aa24.95■■□□□ 1.58
UBXN1-216ENST00000533908 AK7Q96M32 723 aa24.95■■□□□ 1.58
UBXN1-216ENST00000533908 CD2APQ9Y5K6 639 aa24.95■■□□□ 1.58
UBXN1-216ENST00000533908 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.94■■□□□ 1.58
UBXN1-216ENST00000533908 PHF14O94880 888 aa24.94■■□□□ 1.58
UBXN1-216ENST00000533908 ITPK1Q13572 414 aa24.94■■□□□ 1.58
UBXN1-216ENST00000533908 GRIN3BO60391 1043 aa24.93■■□□□ 1.58
UBXN1-216ENST00000533908 HMGB2P26583 209 aaKnown RBP24.93■■□□□ 1.58
UBXN1-216ENST00000533908 IFNL2Q8IZJ0 200 aa24.93■■□□□ 1.58
UBXN1-216ENST00000533908 TMOD3Q9NYL9 352 aa24.93■■□□□ 1.58
UBXN1-216ENST00000533908 UBR3Q6ZT12 1888 aa24.93■■□□□ 1.58
UBXN1-216ENST00000533908 CLSPNQ9HAW4 1339 aa24.91■■□□□ 1.58
UBXN1-216ENST00000533908 ATG3Q9NT62 314 aa24.91■■□□□ 1.58
UBXN1-216ENST00000533908 HSPA5P11021 654 aaKnown RBP24.9■■□□□ 1.58
UBXN1-216ENST00000533908 PANK3Q9H999 370 aa24.9■■□□□ 1.58
UBXN1-216ENST00000533908 SENP3-EIF4A1A0A087X0R7 540 aa24.88■■□□□ 1.57
UBXN1-216ENST00000533908 SSFA2P28290 1259 aa24.88■■□□□ 1.57
UBXN1-216ENST00000533908 ATP6V1AP38606 617 aa24.88■■□□□ 1.57
UBXN1-216ENST00000533908 SLC4A9Q96Q91 983 aa24.87■■□□□ 1.57
UBXN1-216ENST00000533908 IGSF1Q8N6C5 1336 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms