RNA–Protein interactions for RNA: ENST00000533595.5

SF3B2-214, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-214ENST00000533595 SULT6B1Q6IMI4 303 aa19.55■□□□□ 0.72
SF3B2-214ENST00000533595 AEBP1Q8IUX7 1158 aa19.55■□□□□ 0.72
SF3B2-214ENST00000533595 ZCRB1Q8TBF4 217 aaKnown RBP19.55■□□□□ 0.72
SF3B2-214ENST00000533595 KDRP35968 1356 aa19.54■□□□□ 0.72
SF3B2-214ENST00000533595 MARCH10Q8NA82 808 aaPredicted RBP19.53■□□□□ 0.72
SF3B2-214ENST00000533595 HMOX1P09601 288 aa19.52■□□□□ 0.72
SF3B2-214ENST00000533595 FAM196AQ6ZSG2 479 aa19.52■□□□□ 0.72
SF3B2-214ENST00000533595 DDX54Q8TDD1 881 aaKnown RBP19.51■□□□□ 0.71
SF3B2-214ENST00000533595 SPG7Q9UQ90 795 aa19.51■□□□□ 0.71
SF3B2-214ENST00000533595 PLEKHG2Q9H7P9 1386 aa19.51■□□□□ 0.71
SF3B2-214ENST00000533595 U2AF1L5P0DN76 240 aaPredicted RBP19.5■□□□□ 0.71
SF3B2-214ENST00000533595 U2AF1Q01081 240 aaKnown RBP eCLIP19.5■□□□□ 0.718e-8■□□□□ 11.2
SF3B2-214ENST00000533595 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.5■□□□□ 0.712e-7■■□□□ 13.9
SF3B2-214ENST00000533595 PCDH11XQ9BZA7 1347 aa19.49■□□□□ 0.71
SF3B2-214ENST00000533595 PCDH11YQ9BZA8 1340 aa19.49■□□□□ 0.71
SF3B2-214ENST00000533595 PKD1L3Q7Z443 1732 aa19.48■□□□□ 0.71
SF3B2-214ENST00000533595 PLEKHO1Q53GL0 409 aaPredicted RBP19.48■□□□□ 0.71
SF3B2-214ENST00000533595 SHANK3Q9BYB0 1731 aa19.48■□□□□ 0.71
SF3B2-214ENST00000533595 AMOTQ4VCS5 1084 aa19.47■□□□□ 0.71
SF3B2-214ENST00000533595 BCL9O00512 1426 aa19.47■□□□□ 0.71
SF3B2-214ENST00000533595 UPF1Q92900 1129 aaKnown RBP eCLIP19.46■□□□□ 0.71
SF3B2-214ENST00000533595 CYP27B1O15528 508 aa19.45■□□□□ 0.7
SF3B2-214ENST00000533595 FCHSD2O94868 740 aa19.45■□□□□ 0.7
SF3B2-214ENST00000533595 CCDC125Q86Z20 511 aa19.44■□□□□ 0.7
SF3B2-214ENST00000533595 RSPH6AQ9H0K4 717 aa19.44■□□□□ 0.7
SF3B2-214ENST00000533595 TRIM37O94972 964 aa19.43■□□□□ 0.7
SF3B2-214ENST00000533595 PRKAR2BP31323 418 aa19.43■□□□□ 0.7
SF3B2-214ENST00000533595 ZNF530Q6P9A1 599 aaPredicted RBP19.43■□□□□ 0.7
SF3B2-214ENST00000533595 IFNL2Q8IZJ0 200 aa19.43■□□□□ 0.7
SF3B2-214ENST00000533595 PHKG2P15735 406 aa19.42■□□□□ 0.7
SF3B2-214ENST00000533595 KAT6BQ8WYB5 2073 aa19.41■□□□□ 0.7
SF3B2-214ENST00000533595 SF3B2Q13435 895 aaKnown RBP19.41■□□□□ 0.7
SF3B2-214ENST00000533595 WDR43Q15061 677 aaKnown RBP eCLIP19.41■□□□□ 0.7
SF3B2-214ENST00000533595 SBF2Q86WG5 1849 aa19.41■□□□□ 0.7
SF3B2-214ENST00000533595 NKX1-1Q15270 411 aaPredicted RBP19.4■□□□□ 0.7
SF3B2-214ENST00000533595 C1orf141Q5JVX7 400 aa19.4■□□□□ 0.7
SF3B2-214ENST00000533595 DIEXFQ68CQ4 756 aaKnown RBP19.4■□□□□ 0.7
SF3B2-214ENST00000533595 ACSBG1Q96GR2 724 aa19.4■□□□□ 0.7
SF3B2-214ENST00000533595 MTHFSDQ2M296 383 aaKnown RBP19.39■□□□□ 0.69
SF3B2-214ENST00000533595 CCDC184Q52MB2 194 aa19.39■□□□□ 0.69
SF3B2-214ENST00000533595 BCL11BQ9C0K0 894 aaPredicted RBP19.39■□□□□ 0.69
SF3B2-214ENST00000533595 PNNQ9H307 717 aaKnown RBP19.39■□□□□ 0.69
SF3B2-214ENST00000533595 HSP90AB1P08238 724 aaKnown RBP19.38■□□□□ 0.69
SF3B2-214ENST00000533595 PHACTR3Q96KR7 559 aa19.38■□□□□ 0.69
SF3B2-214ENST00000533595 MRS2Q9HD23 443 aa19.38■□□□□ 0.69
SF3B2-214ENST00000533595 KCNQ2O43526 872 aa19.37■□□□□ 0.69
SF3B2-214ENST00000533595 NEFMP07197 916 aa19.37■□□□□ 0.69
SF3B2-214ENST00000533595 AKAP4Q5JQC9 854 aa19.37■□□□□ 0.69
SF3B2-214ENST00000533595 GAS2L2Q8NHY3 880 aa19.37■□□□□ 0.69
SF3B2-214ENST00000533595 NHSQ6T4R5 1651 aa19.36■□□□□ 0.69
SF3B2-214ENST00000533595 PRIM1P49642 420 aaKnown RBP19.36■□□□□ 0.69
SF3B2-214ENST00000533595 PTF1AQ7RTS3 328 aa19.36■□□□□ 0.69
SF3B2-214ENST00000533595 SYTL4Q96C24 671 aaPredicted RBP19.36■□□□□ 0.69
SF3B2-214ENST00000533595 DOT1LQ8TEK3 1739 aa19.36■□□□□ 0.69
SF3B2-214ENST00000533595 TNS1Q9HBL0 1735 aaKnown RBP19.36■□□□□ 0.69
SF3B2-214ENST00000533595 APBA3O96018 575 aa19.35■□□□□ 0.69
SF3B2-214ENST00000533595 BAG6P46379 1132 aa19.35■□□□□ 0.69
SF3B2-214ENST00000533595 DCAF5Q96JK2 942 aa19.35■□□□□ 0.69
SF3B2-214ENST00000533595 PLEKHF1Q96S99 279 aa19.35■□□□□ 0.69
SF3B2-214ENST00000533595 ADAMTS8Q9UP79 889 aa19.35■□□□□ 0.69
SF3B2-214ENST00000533595 MAPK8IP3Q9UPT6 1336 aa19.33■□□□□ 0.69
SF3B2-214ENST00000533595 MPRIPQ6WCQ1 1025 aa19.33■□□□□ 0.68
SF3B2-214ENST00000533595 TOGARAM1Q9Y4F4 1720 aa19.32■□□□□ 0.68
SF3B2-214ENST00000533595 DEFB132Q7Z7B7 95 aa19.32■□□□□ 0.68
SF3B2-214ENST00000533595 KDM6AO15550 1401 aaPredicted RBP19.32■□□□□ 0.68
SF3B2-214ENST00000533595 MAP3K5Q99683 1374 aa19.32■□□□□ 0.68
SF3B2-214ENST00000533595 GNAT3A8MTJ3 354 aa19.31■□□□□ 0.68
SF3B2-214ENST00000533595 ERVV-2B6SEH9 535 aa19.31■□□□□ 0.68
SF3B2-214ENST00000533595 PNISRQ8TF01 805 aaKnown RBP19.31■□□□□ 0.68
SF3B2-214ENST00000533595 EN1Q05925 392 aaPredicted RBP19.3■□□□□ 0.68
SF3B2-214ENST00000533595 CCDC146Q8IYE0 955 aa19.3■□□□□ 0.68
SF3B2-214ENST00000533595 BTAF1O14981 1849 aa19.3■□□□□ 0.68
SF3B2-214ENST00000533595 RNMTO43148 476 aaKnown RBP19.29■□□□□ 0.68
SF3B2-214ENST00000533595 RUNDC1Q96C34 613 aa19.29■□□□□ 0.68
SF3B2-214ENST00000533595 TMOD3Q9NYL9 352 aa19.29■□□□□ 0.68
SF3B2-214ENST00000533595 ITGB4P16144 1822 aa19.29■□□□□ 0.68
SF3B2-214ENST00000533595 PLSCR1O15162 318 aa19.28■□□□□ 0.68
SF3B2-214ENST00000533595 NFE2L2Q16236 605 aa19.28■□□□□ 0.68
SF3B2-214ENST00000533595 PIGBQ92521 554 aa19.28■□□□□ 0.68
SF3B2-214ENST00000533595 LGR6Q9HBX8 967 aa19.28■□□□□ 0.68
SF3B2-214ENST00000533595 SCN11AQ9UI33 1791 aa19.28■□□□□ 0.68
SF3B2-214ENST00000533595 CCER2I3L3R5 266 aa19.27■□□□□ 0.68
SF3B2-214ENST00000533595 CABP4P57796 275 aa19.27■□□□□ 0.68
SF3B2-214ENST00000533595 CAMKK2Q96RR4 588 aa19.27■□□□□ 0.68
SF3B2-214ENST00000533595 RTF1Q92541 710 aaKnown RBP19.26■□□□□ 0.67
SF3B2-214ENST00000533595 ADAMTS7Q9UKP4 1686 aa19.26■□□□□ 0.67
SF3B2-214ENST00000533595 HTATSF1O43719 755 aaKnown RBP19.25■□□□□ 0.67
SF3B2-214ENST00000533595 EZH2Q15910 746 aaKnown RBP19.25■□□□□ 0.67
SF3B2-214ENST00000533595 NFATC2IPQ8NCF5 419 aa19.25■□□□□ 0.67
SF3B2-214ENST00000533595 IL17REQ8NFR9 667 aa19.25■□□□□ 0.67
SF3B2-214ENST00000533595 SLC52A2Q9HAB3 445 aa19.25■□□□□ 0.67
SF3B2-214ENST00000533595 VIRMAQ69YN4 1812 aaKnown RBP19.25■□□□□ 0.67
SF3B2-214ENST00000533595 RGPD3A6NKT7 1758 aaPredicted RBP19.24■□□□□ 0.67
SF3B2-214ENST00000533595 RGPD4Q7Z3J3 1758 aa19.24■□□□□ 0.67
SF3B2-214ENST00000533595 MIER1Q8N108 512 aa19.24■□□□□ 0.67
SF3B2-214ENST00000533595 TMPOP42166 694 aaKnown RBP19.23■□□□□ 0.67
SF3B2-214ENST00000533595 FAM9BQ8IZU0 186 aa19.23■□□□□ 0.67
SF3B2-214ENST00000533595 SMARCC1Q92922 1105 aaPredicted RBP19.23■□□□□ 0.67
SF3B2-214ENST00000533595 DLG5Q8TDM6 1919 aa19.23■□□□□ 0.67
SF3B2-214ENST00000533595 MRC1P22897 1456 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms