RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 CAMKK2Q96RR4 588 aa23.25■■□□□ 1.31
CTSB-229ENST00000533572 MEGF6O75095 1541 aa23.24■■□□□ 1.31
CTSB-229ENST00000533572 ZCRB1Q8TBF4 217 aaKnown RBP23.24■■□□□ 1.31
CTSB-229ENST00000533572 ANP32CO43423 234 aa23.22■■□□□ 1.31
CTSB-229ENST00000533572 ACSBG1Q96GR2 724 aa23.22■■□□□ 1.31
CTSB-229ENST00000533572 KAT6BQ8WYB5 2073 aa23.21■■□□□ 1.31
CTSB-229ENST00000533572 PLSCR1O15162 318 aa23.18■■□□□ 1.3
CTSB-229ENST00000533572 EIF4A2Q14240 407 aaKnown RBP23.18■■□□□ 1.3
CTSB-229ENST00000533572 NBPF14Q5TI25 921 aa23.18■■□□□ 1.3
CTSB-229ENST00000533572 DIEXFQ68CQ4 756 aaKnown RBP23.18■■□□□ 1.3
CTSB-229ENST00000533572 EYA1Q99502 592 aa23.18■■□□□ 1.3
CTSB-229ENST00000533572 PRKRIP1Q9H875 184 aaPredicted RBP23.18■■□□□ 1.3
CTSB-229ENST00000533572 NHSQ6T4R5 1651 aa23.18■■□□□ 1.3
CTSB-229ENST00000533572 CNGB1Q14028 1251 aaPredicted RBP23.17■■□□□ 1.3
CTSB-229ENST00000533572 PTF1AQ7RTS3 328 aa23.17■■□□□ 1.3
CTSB-229ENST00000533572 RREB1Q92766 1687 aa23.16■■□□□ 1.3
CTSB-229ENST00000533572 PCDH11XQ9BZA7 1347 aa23.16■■□□□ 1.3
CTSB-229ENST00000533572 PCDH11YQ9BZA8 1340 aa23.16■■□□□ 1.3
CTSB-229ENST00000533572 PSDA5PKW4 1024 aaPredicted RBP23.16■■□□□ 1.3
CTSB-229ENST00000533572 KCNQ2O43526 872 aa23.16■■□□□ 1.3
CTSB-229ENST00000533572 RGPD3A6NKT7 1758 aaPredicted RBP23.16■■□□□ 1.3
CTSB-229ENST00000533572 RGPD4Q7Z3J3 1758 aa23.16■■□□□ 1.3
CTSB-229ENST00000533572 NCAPD2Q15021 1401 aa23.15■■□□□ 1.3
CTSB-229ENST00000533572 SYTL4Q96C24 671 aaPredicted RBP23.14■■□□□ 1.29
CTSB-229ENST00000533572 MYBBP1AQ9BQG0 1328 aaKnown RBP23.13■■□□□ 1.29
CTSB-229ENST00000533572 R3HDM1Q15032 1099 aaKnown RBP23.13■■□□□ 1.29
CTSB-229ENST00000533572 SPG7Q9UQ90 795 aa23.13■■□□□ 1.29
CTSB-229ENST00000533572 NUP188Q5SRE5 1749 aa23.13■■□□□ 1.29
CTSB-229ENST00000533572 PPP2R1AP30153 589 aa23.12■■□□□ 1.29
CTSB-229ENST00000533572 SHANK3Q9BYB0 1731 aa23.12■■□□□ 1.29
CTSB-229ENST00000533572 IGSF1Q8N6C5 1336 aa23.1■■□□□ 1.29
CTSB-229ENST00000533572 DOT1LQ8TEK3 1739 aa23.09■■□□□ 1.29
CTSB-229ENST00000533572 PRIM1P49642 420 aaKnown RBP23.09■■□□□ 1.29
CTSB-229ENST00000533572 MTHFSP49914 203 aa23.09■■□□□ 1.29
CTSB-229ENST00000533572 TXNRD1Q16881 649 aa23.09■■□□□ 1.29
CTSB-229ENST00000533572 CFAP53Q96M91 514 aa23.09■■□□□ 1.29
CTSB-229ENST00000533572 BTAF1O14981 1849 aa23.09■■□□□ 1.29
CTSB-229ENST00000533572 PKD1L3Q7Z443 1732 aa23.08■■□□□ 1.28
CTSB-229ENST00000533572 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.07■■□□□ 1.28
CTSB-229ENST00000533572 PLEKHG2Q9H7P9 1386 aa23.05■■□□□ 1.28
CTSB-229ENST00000533572 CYP27B1O15528 508 aa23.05■■□□□ 1.28
CTSB-229ENST00000533572 IL13P35225 146 aa23.03■■□□□ 1.28
CTSB-229ENST00000533572 IFNL2Q8IZJ0 200 aa23.03■■□□□ 1.28
CTSB-229ENST00000533572 PROM2Q8N271 834 aa23.03■■□□□ 1.28
CTSB-229ENST00000533572 STK32BQ9NY57 414 aa23.03■■□□□ 1.28
CTSB-229ENST00000533572 PLEKHO1Q53GL0 409 aaPredicted RBP23.02■■□□□ 1.28
CTSB-229ENST00000533572 SULT6B1Q6IMI4 303 aa23.02■■□□□ 1.28
CTSB-229ENST00000533572 DIAPH1O60610 1272 aaKnown RBP23.01■■□□□ 1.27
CTSB-229ENST00000533572 AMOTQ4VCS5 1084 aa23■■□□□ 1.27
CTSB-229ENST00000533572 AEBP1Q8IUX7 1158 aa23■■□□□ 1.27
CTSB-229ENST00000533572 ANO8Q9HCE9 1232 aaPredicted RBP23■■□□□ 1.27
CTSB-229ENST00000533572 PHKG2P15735 406 aa22.99■■□□□ 1.27
CTSB-229ENST00000533572 SLC27A3Q5K4L6 730 aa22.99■■□□□ 1.27
CTSB-229ENST00000533572 MPRIPQ6WCQ1 1025 aa22.99■■□□□ 1.27
CTSB-229ENST00000533572 NKX1-1Q15270 411 aaPredicted RBP22.98■■□□□ 1.27
CTSB-229ENST00000533572 NUDCQ9Y266 331 aa22.98■■□□□ 1.27
CTSB-229ENST00000533572 HSP90AB1P08238 724 aaKnown RBP22.97■■□□□ 1.27
CTSB-229ENST00000533572 ZNF530Q6P9A1 599 aaPredicted RBP22.97■■□□□ 1.27
CTSB-229ENST00000533572 C1orf141Q5JVX7 400 aa22.96■■□□□ 1.27
CTSB-229ENST00000533572 KDRP35968 1356 aa22.96■■□□□ 1.27
CTSB-229ENST00000533572 CCER2I3L3R5 266 aa22.95■■□□□ 1.26
CTSB-229ENST00000533572 LRP5O75197 1615 aa22.95■■□□□ 1.26
CTSB-229ENST00000533572 SLC15A2Q16348 729 aa22.95■■□□□ 1.26
CTSB-229ENST00000533572 U2SURPO15042 1029 aaKnown RBP22.94■■□□□ 1.26
CTSB-229ENST00000533572 HMOX1P09601 288 aa22.94■■□□□ 1.26
CTSB-229ENST00000533572 TMOD3Q9NYL9 352 aa22.94■■□□□ 1.26
CTSB-229ENST00000533572 CCNL1Q9UK58 526 aaPredicted RBP22.94■■□□□ 1.26
CTSB-229ENST00000533572 TOGARAM1Q9Y4F4 1720 aa22.94■■□□□ 1.26
CTSB-229ENST00000533572 COL3A1P02461 1466 aaPredicted RBP22.93■■□□□ 1.26
CTSB-229ENST00000533572 SMARCC1Q92922 1105 aaPredicted RBP22.93■■□□□ 1.26
CTSB-229ENST00000533572 LRRC4BQ9NT99 713 aa22.92■■□□□ 1.26
CTSB-229ENST00000533572 ITGB4P16144 1822 aa22.92■■□□□ 1.26
CTSB-229ENST00000533572 PALLDQ8WX93 1383 aa22.91■■□□□ 1.26
CTSB-229ENST00000533572 HMGB2P26583 209 aaKnown RBP22.91■■□□□ 1.26
CTSB-229ENST00000533572 PIGBQ92521 554 aa22.91■■□□□ 1.26
CTSB-229ENST00000533572 DCAF5Q96JK2 942 aa22.91■■□□□ 1.26
CTSB-229ENST00000533572 LY75O60449 1722 aa22.91■■□□□ 1.26
CTSB-229ENST00000533572 MRS2Q9HD23 443 aa22.9■■□□□ 1.26
CTSB-229ENST00000533572 PAPPAQ13219 1627 aa22.9■■□□□ 1.26
CTSB-229ENST00000533572 SPON1Q9HCB6 807 aa22.89■■□□□ 1.25
CTSB-229ENST00000533572 ERVV-2B6SEH9 535 aa22.88■■□□□ 1.25
CTSB-229ENST00000533572 KCNQ4P56696 695 aa22.88■■□□□ 1.25
CTSB-229ENST00000533572 MIER1Q8N108 512 aa22.88■■□□□ 1.25
CTSB-229ENST00000533572 ZNF827Q17R98 1081 aa22.87■■□□□ 1.25
CTSB-229ENST00000533572 PNNQ9H307 717 aaKnown RBP22.87■■□□□ 1.25
CTSB-229ENST00000533572 CABP4P57796 275 aa22.86■■□□□ 1.25
CTSB-229ENST00000533572 WDR43Q15061 677 aaKnown RBP eCLIP22.86■■□□□ 1.25
CTSB-229ENST00000533572 AKAP4Q5JQC9 854 aa22.85■■□□□ 1.25
CTSB-229ENST00000533572 TFCP2L1Q9NZI6 479 aa22.85■■□□□ 1.25
CTSB-229ENST00000533572 PPP1R1BQ9UD71 204 aaPredicted RBP22.85■■□□□ 1.25
CTSB-229ENST00000533572 CASZ1Q86V15 1759 aa22.84■■□□□ 1.25
CTSB-229ENST00000533572 AKT1S1Q96B36 256 aa22.84■■□□□ 1.25
CTSB-229ENST00000533572 KDM6AO15550 1401 aaPredicted RBP22.83■■□□□ 1.25
CTSB-229ENST00000533572 ZBTB7AO95365 584 aa22.83■■□□□ 1.25
CTSB-229ENST00000533572 U2AF1L5P0DN76 240 aaPredicted RBP22.83■■□□□ 1.25
CTSB-229ENST00000533572 U2AF1Q01081 240 aaKnown RBP eCLIP22.83■■□□□ 1.25
CTSB-229ENST00000533572 FCHSD2O94868 740 aa22.82■■□□□ 1.24
CTSB-229ENST00000533572 PDGFDQ9GZP0 370 aaPredicted RBP22.82■■□□□ 1.24
CTSB-229ENST00000533572 ASAP1Q9ULH1 1129 aa22.82■■□□□ 1.24
CTSB-229ENST00000533572 LOC102724428A0A0B4J2F2 783 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms