RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 PARP4Q9UKK3 1724 aaKnown RBP23.21■■□□□ 1.31
NXF1-216ENST00000533499 DISP2A7MBM2 1401 aa23.2■■□□□ 1.3
NXF1-216ENST00000533499 ZCRB1Q8TBF4 217 aaKnown RBP23.2■■□□□ 1.3
NXF1-216ENST00000533499 DDX54Q8TDD1 881 aaKnown RBP23.2■■□□□ 1.3
NXF1-216ENST00000533499 ADAMTS8Q9UP79 889 aa23.2■■□□□ 1.3
NXF1-216ENST00000533499 NCAPD2Q15021 1401 aa23.19■■□□□ 1.3
NXF1-216ENST00000533499 ONECUT3O60422 494 aaPredicted RBP23.19■■□□□ 1.3
NXF1-216ENST00000533499 FCHSD2O94868 740 aa23.19■■□□□ 1.3
NXF1-216ENST00000533499 PLEKHO1Q53GL0 409 aaPredicted RBP23.19■■□□□ 1.3
NXF1-216ENST00000533499 CCDC146Q8IYE0 955 aa23.19■■□□□ 1.3
NXF1-216ENST00000533499 RSPH6AQ9H0K4 717 aa23.19■■□□□ 1.3
NXF1-216ENST00000533499 SPG7Q9UQ90 795 aa23.19■■□□□ 1.3
NXF1-216ENST00000533499 KDRP35968 1356 aa23.18■■□□□ 1.3
NXF1-216ENST00000533499 THSD7AQ9UPZ6 1657 aa23.18■■□□□ 1.3
NXF1-216ENST00000533499 OVOS2A0A0G2JMS6 1433 aa23.17■■□□□ 1.3
NXF1-216ENST00000533499 MAPK8IP3Q9UPT6 1336 aa23.17■■□□□ 1.3
NXF1-216ENST00000533499 PNISRQ8TF01 805 aaKnown RBP23.17■■□□□ 1.3
NXF1-216ENST00000533499 PNNQ9H307 717 aaKnown RBP23.17■■□□□ 1.3
NXF1-216ENST00000533499 LRRC37A3O60309 1634 aa23.16■■□□□ 1.3
NXF1-216ENST00000533499 FAM182BQ5T319 152 aa23.16■■□□□ 1.3
NXF1-216ENST00000533499 KRT27Q7Z3Y8 459 aa23.16■■□□□ 1.3
NXF1-216ENST00000533499 BRWD3Q6RI45 1802 aa23.16■■□□□ 1.3
NXF1-216ENST00000533499 ZNF530Q6P9A1 599 aaPredicted RBP23.15■■□□□ 1.3
NXF1-216ENST00000533499 AMOTQ4VCS5 1084 aa23.14■■□□□ 1.29
NXF1-216ENST00000533499 TNS2Q63HR2 1409 aa23.14■■□□□ 1.29
NXF1-216ENST00000533499 PHACTR3Q96KR7 559 aa23.13■■□□□ 1.29
NXF1-216ENST00000533499 PCDH11XQ9BZA7 1347 aa23.12■■□□□ 1.29
NXF1-216ENST00000533499 PCDH11YQ9BZA8 1340 aa23.12■■□□□ 1.29
NXF1-216ENST00000533499 C1orf141Q5JVX7 400 aa23.12■■□□□ 1.29
NXF1-216ENST00000533499 KAT6BQ8WYB5 2073 aa23.12■■□□□ 1.29
NXF1-216ENST00000533499 SENP3-EIF4A1A0A087X0R7 540 aa23.11■■□□□ 1.29
NXF1-216ENST00000533499 MTHFSDQ2M296 383 aaKnown RBP23.11■■□□□ 1.29
NXF1-216ENST00000533499 MARCH10Q8NA82 808 aaPredicted RBP23.11■■□□□ 1.29
NXF1-216ENST00000533499 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.1■■□□□ 1.297e-6■■□□□ 12.8
NXF1-216ENST00000533499 PKD1L3Q7Z443 1732 aa23.09■■□□□ 1.29
NXF1-216ENST00000533499 IFNL2Q8IZJ0 200 aa23.09■■□□□ 1.29
NXF1-216ENST00000533499 GAS2L2Q8NHY3 880 aa23.09■■□□□ 1.29
NXF1-216ENST00000533499 RUNDC1Q96C34 613 aa23.09■■□□□ 1.29
NXF1-216ENST00000533499 CYP27B1O15528 508 aa23.08■■□□□ 1.29
NXF1-216ENST00000533499 NEUROD2Q15784 382 aa23.07■■□□□ 1.28
NXF1-216ENST00000533499 PLEKHF1Q96S99 279 aa23.07■■□□□ 1.28
NXF1-216ENST00000533499 RRP7AQ9Y3A4 280 aaKnown RBP23.07■■□□□ 1.28
NXF1-216ENST00000533499 SHANK3Q9BYB0 1731 aa23.06■■□□□ 1.28
NXF1-216ENST00000533499 PHKG2P15735 406 aa23.06■■□□□ 1.28
NXF1-216ENST00000533499 ILDR2Q71H61 639 aa23.05■■□□□ 1.28
NXF1-216ENST00000533499 MPRIPQ6WCQ1 1025 aa23.04■■□□□ 1.28
NXF1-216ENST00000533499 SYTL4Q96C24 671 aaPredicted RBP23.04■■□□□ 1.28
NXF1-216ENST00000533499 ACSBG1Q96GR2 724 aa23.04■■□□□ 1.28
NXF1-216ENST00000533499 APAF1O14727 1248 aa23.03■■□□□ 1.28
NXF1-216ENST00000533499 NFE2L2Q16236 605 aa23.03■■□□□ 1.28
NXF1-216ENST00000533499 AKAP4Q5JQC9 854 aa23.03■■□□□ 1.28
NXF1-216ENST00000533499 FAM196AQ6ZSG2 479 aa23.03■■□□□ 1.28
NXF1-216ENST00000533499 PLEKHG2Q9H7P9 1386 aa23.02■■□□□ 1.28
NXF1-216ENST00000533499 GNAT3A8MTJ3 354 aa23.02■■□□□ 1.28
NXF1-216ENST00000533499 HSP90AB1P08238 724 aaKnown RBP23.02■■□□□ 1.28
NXF1-216ENST00000533499 RTF1Q92541 710 aaKnown RBP23.02■■□□□ 1.28
NXF1-216ENST00000533499 RIPK4P57078 832 aa23.01■■□□□ 1.27
NXF1-216ENST00000533499 SALL2Q9Y467 1007 aaPredicted RBP23.01■■□□□ 1.27
NXF1-216ENST00000533499 MAP3K5Q99683 1374 aa23.01■■□□□ 1.27
NXF1-216ENST00000533499 TMPOP42166 694 aaKnown RBP23■■□□□ 1.27
NXF1-216ENST00000533499 DCAF5Q96JK2 942 aa22.98■■□□□ 1.27
NXF1-216ENST00000533499 TRIM37O94972 964 aa22.97■■□□□ 1.27
NXF1-216ENST00000533499 PRIM1P49642 420 aaKnown RBP22.97■■□□□ 1.27
NXF1-216ENST00000533499 DCTN1Q14203 1278 aa22.97■■□□□ 1.27
NXF1-216ENST00000533499 MCM10Q7L590 875 aa22.97■■□□□ 1.27
NXF1-216ENST00000533499 LGR6Q9HBX8 967 aa22.97■■□□□ 1.27
NXF1-216ENST00000533499 DLG5Q8TDM6 1919 aa22.97■■□□□ 1.27
NXF1-216ENST00000533499 DOT1LQ8TEK3 1739 aa22.96■■□□□ 1.27
NXF1-216ENST00000533499 RNMTO43148 476 aaKnown RBP22.95■■□□□ 1.26
NXF1-216ENST00000533499 KCNQ2O43526 872 aa22.95■■□□□ 1.26
NXF1-216ENST00000533499 CABP4P57796 275 aa22.95■■□□□ 1.26
NXF1-216ENST00000533499 NKX1-1Q15270 411 aaPredicted RBP22.95■■□□□ 1.26
NXF1-216ENST00000533499 KDM6AO15550 1401 aaPredicted RBP22.94■■□□□ 1.26
NXF1-216ENST00000533499 LMOD3Q0VAK6 560 aa22.93■■□□□ 1.26
NXF1-216ENST00000533499 TEFQ10587 303 aa22.93■■□□□ 1.26
NXF1-216ENST00000533499 THUMPD2Q9BTF0 503 aaKnown RBP22.93■■□□□ 1.26
NXF1-216ENST00000533499 TMOD3Q9NYL9 352 aa22.93■■□□□ 1.26
NXF1-216ENST00000533499 VIRMAQ69YN4 1812 aaKnown RBP22.93■■□□□ 1.26
NXF1-216ENST00000533499 IL17REQ8NFR9 667 aa22.92■■□□□ 1.26
NXF1-216ENST00000533499 SF3B2Q13435 895 aaKnown RBP22.91■■□□□ 1.26
NXF1-216ENST00000533499 PTF1AQ7RTS3 328 aa22.91■■□□□ 1.26
NXF1-216ENST00000533499 SBF2Q86WG5 1849 aa22.91■■□□□ 1.26
NXF1-216ENST00000533499 SCN11AQ9UI33 1791 aa22.91■■□□□ 1.26
NXF1-216ENST00000533499 TOGARAM1Q9Y4F4 1720 aa22.91■■□□□ 1.26
NXF1-216ENST00000533499 ERVV-2B6SEH9 535 aa22.9■■□□□ 1.26
NXF1-216ENST00000533499 HTATSF1O43719 755 aaKnown RBP22.9■■□□□ 1.26
NXF1-216ENST00000533499 NFATC2IPQ8NCF5 419 aa22.9■■□□□ 1.26
NXF1-216ENST00000533499 BCL11BQ9C0K0 894 aaPredicted RBP22.89■■□□□ 1.25
NXF1-216ENST00000533499 ITGB4P16144 1822 aa22.89■■□□□ 1.25
NXF1-216ENST00000533499 TRIM35Q9UPQ4 493 aa22.88■■□□□ 1.25
NXF1-216ENST00000533499 BCL9O00512 1426 aa22.88■■□□□ 1.25
NXF1-216ENST00000533499 NHSQ6T4R5 1651 aa22.87■■□□□ 1.25
NXF1-216ENST00000533499 APBA3O96018 575 aa22.87■■□□□ 1.25
NXF1-216ENST00000533499 PIGBQ92521 554 aa22.87■■□□□ 1.25
NXF1-216ENST00000533499 SLC52A2Q9HAB3 445 aa22.87■■□□□ 1.25
NXF1-216ENST00000533499 LAS1LQ9Y4W2 734 aaKnown RBP22.87■■□□□ 1.25
NXF1-216ENST00000533499 HNRNPUQ00839 825 aaKnown RBP eCLIP22.86■■□□□ 1.25
NXF1-216ENST00000533499 BTAF1O14981 1849 aa22.84■■□□□ 1.25
NXF1-216ENST00000533499 MIS18AQ9NYP9 233 aa22.83■■□□□ 1.25
NXF1-216ENST00000533499 CEMIPQ8WUJ3 1361 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms