RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 MICALL1Q8N3F8 863 aa9.24□□□□□ -0.93
CSRP1-218ENST00000533402 SMARCC1Q92922 1105 aaPredicted RBP9.24□□□□□ -0.93
CSRP1-218ENST00000533402 LRRFIP2Q9Y608 721 aaKnown RBP9.24□□□□□ -0.93
CSRP1-218ENST00000533402 FILIP1LQ4L180 1135 aa9.24□□□□□ -0.93
CSRP1-218ENST00000533402 CDK13Q14004 1512 aaKnown RBP9.24□□□□□ -0.93
CSRP1-218ENST00000533402 ZNF608Q9ULD9 1512 aaPredicted RBP9.23□□□□□ -0.93
CSRP1-218ENST00000533402 GOLIM4O00461 696 aa9.23□□□□□ -0.93
CSRP1-218ENST00000533402 L3MBTL2Q969R5 705 aa9.23□□□□□ -0.93
CSRP1-218ENST00000533402 MAP2K1Q02750 393 aaPredicted RBP9.23□□□□□ -0.93
CSRP1-218ENST00000533402 CPLX1O14810 134 aa9.23□□□□□ -0.93
CSRP1-218ENST00000533402 LIG1P18858 919 aa9.23□□□□□ -0.93
CSRP1-218ENST00000533402 SPATA24Q86W54 205 aa9.23□□□□□ -0.93
CSRP1-218ENST00000533402 MRVI1Q9Y6F6 885 aa9.23□□□□□ -0.93
CSRP1-218ENST00000533402 FANCAO15360 1455 aa9.23□□□□□ -0.93
CSRP1-218ENST00000533402 SEPT7Q16181 437 aaKnown RBP9.23□□□□□ -0.93
CSRP1-218ENST00000533402 WDR66Q8TBY9 1149 aa9.23□□□□□ -0.93
CSRP1-218ENST00000533402 MYCBPQ99417 103 aaPredicted RBP9.23□□□□□ -0.93
CSRP1-218ENST00000533402 OFD1O75665 1012 aa9.23□□□□□ -0.93
CSRP1-218ENST00000533402 DZIP1LQ8IYY4 767 aaKnown RBP9.23□□□□□ -0.93
CSRP1-218ENST00000533402 PAXBP1Q9Y5B6 917 aa9.23□□□□□ -0.93
CSRP1-218ENST00000533402 MCM3P25205 808 aa9.23□□□□□ -0.93
CSRP1-218ENST00000533402 DMRT2Q9Y5R5 561 aa9.23□□□□□ -0.93
CSRP1-218ENST00000533402 ABCC10Q5T3U5 1492 aa9.22□□□□□ -0.93
CSRP1-218ENST00000533402 CEP57Q86XR8 500 aa9.22□□□□□ -0.93
CSRP1-218ENST00000533402 RTEL1-TNFRSF6BF6WH68 1400 aa9.22□□□□□ -0.93
CSRP1-218ENST00000533402 PPFIBP1Q86W92 1011 aa9.22□□□□□ -0.93
CSRP1-218ENST00000533402 A0A1B0GUA9 196 aa9.22□□□□□ -0.93
CSRP1-218ENST00000533402 XRCC6P12956 609 aaKnown RBP eCLIP9.22□□□□□ -0.93
CSRP1-218ENST00000533402 SAFB2Q14151 953 aaKnown RBP eCLIP9.22□□□□□ -0.93
CSRP1-218ENST00000533402 THEMISQ8N1K5 641 aaPredicted RBP9.22□□□□□ -0.93
CSRP1-218ENST00000533402 DRC1Q96MC2 740 aa9.22□□□□□ -0.93
CSRP1-218ENST00000533402 PDCP20941 246 aa9.22□□□□□ -0.93
CSRP1-218ENST00000533402 FEZ1Q99689 392 aa9.22□□□□□ -0.93
CSRP1-218ENST00000533402 URI1O94763 535 aaPredicted RBP9.21□□□□□ -0.93
CSRP1-218ENST00000533402 NEK4P51957 841 aa9.21□□□□□ -0.93
CSRP1-218ENST00000533402 OGFRQ9NZT2 677 aa9.21□□□□□ -0.93
CSRP1-218ENST00000533402 TEFQ10587 303 aa9.21□□□□□ -0.93
CSRP1-218ENST00000533402 FOSBP53539 338 aa9.21□□□□□ -0.94
CSRP1-218ENST00000533402 RRP7AQ9Y3A4 280 aaKnown RBP9.21□□□□□ -0.94
CSRP1-218ENST00000533402 DDX58O95786 925 aaKnown RBP9.21□□□□□ -0.94
CSRP1-218ENST00000533402 BRPF1P55201 1214 aaPredicted RBP9.21□□□□□ -0.94
CSRP1-218ENST00000533402 LRCH2Q5VUJ6 765 aa9.21□□□□□ -0.94
CSRP1-218ENST00000533402 WDR33Q9C0J8 1336 aaKnown RBP9.21□□□□□ -0.94
CSRP1-218ENST00000533402 TCOF1Q13428 1488 aaKnown RBP9.21□□□□□ -0.94
CSRP1-218ENST00000533402 DNMT1P26358 1616 aaKnown RBP9.21□□□□□ -0.94
CSRP1-218ENST00000533402 CBFA2T2O43439 604 aa9.21□□□□□ -0.94
CSRP1-218ENST00000533402 NINLQ9Y2I6 1382 aa9.21□□□□□ -0.94
CSRP1-218ENST00000533402 HSPA4P34932 840 aa9.21□□□□□ -0.94
CSRP1-218ENST00000533402 NAA25Q14CX7 972 aa9.21□□□□□ -0.94
CSRP1-218ENST00000533402 ARHGEF11O15085 1522 aa9.2□□□□□ -0.94
CSRP1-218ENST00000533402 SWAP70Q9UH65 585 aa9.2□□□□□ -0.94
CSRP1-218ENST00000533402 UHRF1BP1LA0JNW5 1464 aa9.2□□□□□ -0.94
CSRP1-218ENST00000533402 CASQ1P31415 396 aa9.2□□□□□ -0.94
CSRP1-218ENST00000533402 ZNHIT6Q9NWK9 470 aaKnown RBP9.2□□□□□ -0.94
CSRP1-218ENST00000533402 PPP1R1BQ9UD71 204 aaPredicted RBP9.2□□□□□ -0.94
CSRP1-218ENST00000533402 ANKRD62A6NC57 917 aa9.2□□□□□ -0.94
CSRP1-218ENST00000533402 TRIM21P19474 475 aaKnown RBP9.2□□□□□ -0.94
CSRP1-218ENST00000533402 SYTL4Q96C24 671 aaPredicted RBP9.2□□□□□ -0.94
CSRP1-218ENST00000533402 CHD1O14646 1710 aa9.2□□□□□ -0.94
CSRP1-218ENST00000533402 ARID4AP29374 1257 aaPredicted RBP9.2□□□□□ -0.94
CSRP1-218ENST00000533402 SEPT6Q14141 434 aa9.2□□□□□ -0.94
CSRP1-218ENST00000533402 DNAI2Q9GZS0 605 aa9.2□□□□□ -0.94
CSRP1-218ENST00000533402 PLCH2O75038 1416 aa9.2□□□□□ -0.94
CSRP1-218ENST00000533402 SFPQP23246 707 aaKnown RBP eCLIP9.2□□□□□ -0.94
CSRP1-218ENST00000533402 NUP133Q8WUM0 1156 aa9.2□□□□□ -0.94
CSRP1-218ENST00000533402 CFAP65Q6ZU64 1925 aaKnown RBP9.19□□□□□ -0.94
CSRP1-218ENST00000533402 ZSCAN12O43309 604 aa9.19□□□□□ -0.94
CSRP1-218ENST00000533402 RSRC1Q96IZ7 334 aaKnown RBP9.19□□□□□ -0.94
CSRP1-218ENST00000533402 SUDS3Q9H7L9 328 aaPredicted RBP9.19□□□□□ -0.94
CSRP1-218ENST00000533402 GCC2Q8IWJ2 1684 aa9.19□□□□□ -0.94
CSRP1-218ENST00000533402 CCDC148Q8NFR7 591 aa9.19□□□□□ -0.94
CSRP1-218ENST00000533402 CAPN2P17655 700 aa9.19□□□□□ -0.94
CSRP1-218ENST00000533402 GPRASP1Q5JY77 1395 aa9.19□□□□□ -0.94
CSRP1-218ENST00000533402 POTEB2H3BUK9 544 aa9.19□□□□□ -0.94
CSRP1-218ENST00000533402 PANK1Q8TE04 598 aa9.19□□□□□ -0.94
CSRP1-218ENST00000533402 ZNF622Q969S3 477 aaKnown RBP eCLIP9.19□□□□□ -0.94
CSRP1-218ENST00000533402 TMX1Q9H3N1 280 aa9.19□□□□□ -0.94
CSRP1-218ENST00000533402 CCDC175P0C221 793 aa9.19□□□□□ -0.94
CSRP1-218ENST00000533402 PANK2Q9BZ23 570 aa9.19□□□□□ -0.94
CSRP1-218ENST00000533402 ARHGAP29Q52LW3 1261 aa9.18□□□□□ -0.94
CSRP1-218ENST00000533402 COG3Q96JB2 828 aa9.18□□□□□ -0.94
CSRP1-218ENST00000533402 ARHGEF5Q12774 1597 aa9.18□□□□□ -0.94
CSRP1-218ENST00000533402 NUP62CLQ9H1M0 184 aa9.18□□□□□ -0.94
CSRP1-218ENST00000533402 ANKRD18AQ8IVF6 992 aa9.18□□□□□ -0.94
CSRP1-218ENST00000533402 MAP2K2P36507 400 aa9.18□□□□□ -0.94
CSRP1-218ENST00000533402 CEP135Q66GS9 1140 aa9.18□□□□□ -0.94
CSRP1-218ENST00000533402 CEP57L1Q8IYX8 460 aa9.18□□□□□ -0.94
CSRP1-218ENST00000533402 USP25Q9UHP3 1055 aa9.18□□□□□ -0.94
CSRP1-218ENST00000533402 EPS15P42566 896 aa9.18□□□□□ -0.94
CSRP1-218ENST00000533402 NAIPQ13075 1403 aa9.17□□□□□ -0.94
CSRP1-218ENST00000533402 NEO1Q92859 1461 aa9.17□□□□□ -0.94
CSRP1-218ENST00000533402 NOLC1Q14978 699 aaKnown RBP eCLIP9.17□□□□□ -0.94
CSRP1-218ENST00000533402 RAPGEF4Q8WZA2 1011 aa9.17□□□□□ -0.94
CSRP1-218ENST00000533402 CEP63Q96MT8 703 aa9.17□□□□□ -0.94
CSRP1-218ENST00000533402 KRT85P78386 507 aa9.17□□□□□ -0.94
CSRP1-218ENST00000533402 PAF1Q8N7H5 531 aa9.17□□□□□ -0.94
CSRP1-218ENST00000533402 SRRTQ9BXP5 876 aaKnown RBP9.17□□□□□ -0.94
CSRP1-218ENST00000533402 GPATCH8Q9UKJ3 1502 aaKnown RBP9.17□□□□□ -0.94
CSRP1-218ENST00000533402 MAP3K11Q16584 847 aa9.17□□□□□ -0.94
CSRP1-218ENST00000533402 KRBA2Q6ZNG9 492 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms