RNA–Protein interactions for RNA: ENST00000533226.2

NCAM1-216, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 2

Gene NCAM1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-216ENST00000533226 NLGN2Q8NFZ4 835 aa16.58■□□□□ 0.24
NCAM1-216ENST00000533226 ANKRD36BQ8N2N9 1353 aa16.58■□□□□ 0.24
NCAM1-216ENST00000533226 LY75O60449 1722 aa16.57■□□□□ 0.24
NCAM1-216ENST00000533226 GIGYF1O75420 1035 aaPredicted RBP16.57■□□□□ 0.24
NCAM1-216ENST00000533226 NSD2O96028 1365 aa16.56■□□□□ 0.24
NCAM1-216ENST00000533226 SHANK3Q9BYB0 1731 aa16.55■□□□□ 0.24
NCAM1-216ENST00000533226 RGPD2P0DJD1 1756 aa16.54■□□□□ 0.24
NCAM1-216ENST00000533226 MAP3K19Q56UN5 1328 aa16.54■□□□□ 0.24
NCAM1-216ENST00000533226 CCNL1Q9UK58 526 aaPredicted RBP16.54■□□□□ 0.24
NCAM1-216ENST00000533226 MEGF6O75095 1541 aa16.54■□□□□ 0.24
NCAM1-216ENST00000533226 MSH5O43196 834 aa16.53■□□□□ 0.24
NCAM1-216ENST00000533226 FBLN1P23142 703 aa16.53■□□□□ 0.24
NCAM1-216ENST00000533226 HOXC9P31274 260 aa16.53■□□□□ 0.24
NCAM1-216ENST00000533226 ZCRB1Q8TBF4 217 aaKnown RBP16.53■□□□□ 0.24
NCAM1-216ENST00000533226 COG3Q96JB2 828 aa16.53■□□□□ 0.24
NCAM1-216ENST00000533226 YBX3P16989 372 aaKnown RBP eCLIP16.52■□□□□ 0.24
NCAM1-216ENST00000533226 AMPHP49418 695 aa16.52■□□□□ 0.24
NCAM1-216ENST00000533226 COL23A1Q86Y22 540 aaPredicted RBP16.51■□□□□ 0.23
NCAM1-216ENST00000533226 PUS7Q96PZ0 661 aaKnown RBP16.51■□□□□ 0.23
NCAM1-216ENST00000533226 USP47Q96K76 1375 aa16.51■□□□□ 0.23
NCAM1-216ENST00000533226 GRIN3BO60391 1043 aa16.5■□□□□ 0.23
NCAM1-216ENST00000533226 MSL1Q68DK7 614 aa16.5■□□□□ 0.23
NCAM1-216ENST00000533226 CEP350Q5VT06 3117 aa16.49■□□□□ 0.23
NCAM1-216ENST00000533226 NBPF6Q5VWK0 638 aa16.47■□□□□ 0.23
NCAM1-216ENST00000533226 USHBP1Q8N6Y0 703 aa16.47■□□□□ 0.23
NCAM1-216ENST00000533226 NBPF4Q96M43 638 aa16.47■□□□□ 0.23
NCAM1-216ENST00000533226 TESK2Q96S53 571 aa16.47■□□□□ 0.23
NCAM1-216ENST00000533226 RTL1A6NKG5 1358 aa16.47■□□□□ 0.23
NCAM1-216ENST00000533226 C5P01031 1676 aa16.46■□□□□ 0.23
NCAM1-216ENST00000533226 RRS1Q15050 365 aaKnown RBP16.46■□□□□ 0.23
NCAM1-216ENST00000533226 ATP10DQ9P241 1426 aa16.45■□□□□ 0.22
NCAM1-216ENST00000533226 RAPGEF4Q8WZA2 1011 aa16.45■□□□□ 0.22
NCAM1-216ENST00000533226 TONSLQ96HA7 1378 aa16.45■□□□□ 0.22
NCAM1-216ENST00000533226 CGNL1Q0VF96 1302 aa16.45■□□□□ 0.22
NCAM1-216ENST00000533226 ST20-MTHFSA0A0A6YYL1 179 aa16.44■□□□□ 0.22
NCAM1-216ENST00000533226 SMG6Q86US8 1419 aaKnown RBP16.44■□□□□ 0.22
NCAM1-216ENST00000533226 PALLDQ8WX93 1383 aa16.43■□□□□ 0.22
NCAM1-216ENST00000533226 TATP17735 454 aaPredicted RBP16.43■□□□□ 0.22
NCAM1-216ENST00000533226 IFFO2Q5TF58 517 aa16.43■□□□□ 0.22
NCAM1-216ENST00000533226 CD2APQ9Y5K6 639 aa16.43■□□□□ 0.22
NCAM1-216ENST00000533226 GGNBP2Q9H3C7 697 aa16.42■□□□□ 0.22
NCAM1-216ENST00000533226 TAF1LQ8IZX4 1826 aa16.42■□□□□ 0.22
NCAM1-216ENST00000533226 PCDH11XQ9BZA7 1347 aa16.42■□□□□ 0.22
NCAM1-216ENST00000533226 PCDH11YQ9BZA8 1340 aa16.42■□□□□ 0.22
NCAM1-216ENST00000533226 FYB1O15117 783 aa16.41■□□□□ 0.22
NCAM1-216ENST00000533226 MPRIPQ6WCQ1 1025 aa16.41■□□□□ 0.22
NCAM1-216ENST00000533226 FLAD1Q8NFF5 587 aa16.41■□□□□ 0.22
NCAM1-216ENST00000533226 HSP90AB2PQ58FF8 381 aa16.4■□□□□ 0.22
NCAM1-216ENST00000533226 GPBP1L1Q9HC44 474 aaPredicted RBP16.4■□□□□ 0.22
NCAM1-216ENST00000533226 C4BP0C0L5 1744 aa16.39■□□□□ 0.21
NCAM1-216ENST00000533226 TOGARAM1Q9Y4F4 1720 aa16.39■□□□□ 0.21
NCAM1-216ENST00000533226 ZNF526Q8TF50 670 aaPredicted RBP16.39■□□□□ 0.21
NCAM1-216ENST00000533226 ADCY9O60503 1353 aa16.38■□□□□ 0.21
NCAM1-216ENST00000533226 INSRP06213 1382 aa16.38■□□□□ 0.21
NCAM1-216ENST00000533226 CYP27B1O15528 508 aa16.38■□□□□ 0.21
NCAM1-216ENST00000533226 SLC24A1O60721 1099 aa16.38■□□□□ 0.21
NCAM1-216ENST00000533226 HMGB2P26583 209 aaKnown RBP16.38■□□□□ 0.21
NCAM1-216ENST00000533226 AMIGO3Q86WK7 504 aa16.38■□□□□ 0.21
NCAM1-216ENST00000533226 AK7Q96M32 723 aa16.38■□□□□ 0.21
NCAM1-216ENST00000533226 SMIM5Q71RC9 77 aa16.37■□□□□ 0.21
NCAM1-216ENST00000533226 WWC3Q9ULE0 1092 aa16.37■□□□□ 0.21
NCAM1-216ENST00000533226 ITGB4P16144 1822 aa16.37■□□□□ 0.21
NCAM1-216ENST00000533226 FLT4P35916 1363 aa16.37■□□□□ 0.21
NCAM1-216ENST00000533226 KIF20BQ96Q89 1820 aa16.36■□□□□ 0.21
NCAM1-216ENST00000533226 PHF14O94880 888 aa16.36■□□□□ 0.21
NCAM1-216ENST00000533226 SMARCC1Q92922 1105 aaPredicted RBP16.36■□□□□ 0.21
NCAM1-216ENST00000533226 IGSF1Q8N6C5 1336 aa16.36■□□□□ 0.21
NCAM1-216ENST00000533226 UBR3Q6ZT12 1888 aa16.35■□□□□ 0.21
NCAM1-216ENST00000533226 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.35■□□□□ 0.21
NCAM1-216ENST00000533226 PKD1L3Q7Z443 1732 aa16.34■□□□□ 0.21
NCAM1-216ENST00000533226 KIF24Q5T7B8 1368 aa16.34■□□□□ 0.21
NCAM1-216ENST00000533226 HSPA6P17066 643 aa16.33■□□□□ 0.2
NCAM1-216ENST00000533226 TMF1P82094 1093 aa16.33■□□□□ 0.2
NCAM1-216ENST00000533226 PIGBQ92521 554 aa16.33■□□□□ 0.2
NCAM1-216ENST00000533226 NSD3Q9BZ95 1437 aa16.33■□□□□ 0.2
NCAM1-216ENST00000533226 EMILIN1Q9Y6C2 1016 aa16.32■□□□□ 0.2
NCAM1-216ENST00000533226 MAP2P11137 1827 aaKnown RBP16.31■□□□□ 0.2
NCAM1-216ENST00000533226 SSFA2P28290 1259 aa16.31■□□□□ 0.2
NCAM1-216ENST00000533226 LINC00116Q8NCU8 138 aa16.31■□□□□ 0.2
NCAM1-216ENST00000533226 LOC102724428A0A0B4J2F2 783 aa16.3■□□□□ 0.2
NCAM1-216ENST00000533226 SIK1P57059 783 aa16.3■□□□□ 0.2
NCAM1-216ENST00000533226 NCAPD2Q15021 1401 aa16.29■□□□□ 0.2
NCAM1-216ENST00000533226 GNPATO15228 680 aa16.29■□□□□ 0.2
NCAM1-216ENST00000533226 PPM1GO15355 546 aaPredicted RBP16.29■□□□□ 0.2
NCAM1-216ENST00000533226 NKX1-1Q15270 411 aaPredicted RBP16.29■□□□□ 0.2
NCAM1-216ENST00000533226 SPG7Q9UQ90 795 aa16.29■□□□□ 0.2
NCAM1-216ENST00000533226 ITPK1Q13572 414 aa16.28■□□□□ 0.2
NCAM1-216ENST00000533226 TMOD3Q9NYL9 352 aa16.28■□□□□ 0.2
NCAM1-216ENST00000533226 CARD14Q9BXL6 1004 aa16.27■□□□□ 0.2
NCAM1-216ENST00000533226 ASAP1Q9ULH1 1129 aa16.27■□□□□ 0.2
NCAM1-216ENST00000533226 CICQ96RK0 1608 aaPredicted RBP16.27■□□□□ 0.19
NCAM1-216ENST00000533226 ANKRD26Q9UPS8 1709 aa16.26■□□□□ 0.19
NCAM1-216ENST00000533226 KIF3CO14782 793 aa16.26■□□□□ 0.19
NCAM1-216ENST00000533226 ATP6V1AP38606 617 aa16.26■□□□□ 0.19
NCAM1-216ENST00000533226 MMP10P09238 476 aa16.25■□□□□ 0.19
NCAM1-216ENST00000533226 CDCA8Q53HL2 280 aa16.25■□□□□ 0.19
NCAM1-216ENST00000533226 PXDNLA1KZ92 1463 aa16.24■□□□□ 0.19
NCAM1-216ENST00000533226 EYA1Q99502 592 aa16.24■□□□□ 0.19
NCAM1-216ENST00000533226 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.24■□□□□ 0.19
NCAM1-216ENST00000533226 WASHC2AQ641Q2 1341 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms