RNA–Protein interactions for RNA: ENST00000533189.1

CTNND1-235, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-235ENST00000533189 CD163L1Q9NR16 1453 aa15.2■□□□□ 0.02
CTNND1-235ENST00000533189 IP6K1Q92551 441 aa15.19■□□□□ 0.02
CTNND1-235ENST00000533189 ANKRD36BQ8N2N9 1353 aa15.19■□□□□ 0.02
CTNND1-235ENST00000533189 TERF2IPQ9NYB0 399 aa15.18■□□□□ 0.02
CTNND1-235ENST00000533189 YBX3P16989 372 aaKnown RBP eCLIP15.17■□□□□ 0.02
CTNND1-235ENST00000533189 NEUROD1Q13562 356 aa15.17■□□□□ 0.02
CTNND1-235ENST00000533189 SIN3AQ96ST3 1273 aa15.17■□□□□ 0.02
CTNND1-235ENST00000533189 CCNL1Q9UK58 526 aaPredicted RBP15.17■□□□□ 0.02
CTNND1-235ENST00000533189 SLC12A5Q9H2X9 1139 aa15.16■□□□□ 0.02
CTNND1-235ENST00000533189 RGPD2P0DJD1 1756 aa15.16■□□□□ 0.02
CTNND1-235ENST00000533189 USP47Q96K76 1375 aa15.15■□□□□ 0.02
CTNND1-235ENST00000533189 ZCRB1Q8TBF4 217 aaKnown RBP15.15■□□□□ 0.02
CTNND1-235ENST00000533189 A0A1W2PP64 1363 aa15.14■□□□□ 0.01
CTNND1-235ENST00000533189 NSD2O96028 1365 aa15.14■□□□□ 0.01
CTNND1-235ENST00000533189 COL23A1Q86Y22 540 aaPredicted RBP15.14■□□□□ 0.01
CTNND1-235ENST00000533189 CARD11Q9BXL7 1154 aa15.14■□□□□ 0.01
CTNND1-235ENST00000533189 ATP10DQ9P241 1426 aa15.14■□□□□ 0.01
CTNND1-235ENST00000533189 AMPHP49418 695 aa15.13■□□□□ 0.01
CTNND1-235ENST00000533189 MSL1Q68DK7 614 aa15.13■□□□□ 0.01
CTNND1-235ENST00000533189 C5P01031 1676 aa15.12■□□□□ 0.01
CTNND1-235ENST00000533189 HMGB2P26583 209 aaKnown RBP15.12■□□□□ 0.01
CTNND1-235ENST00000533189 HOXC9P31274 260 aa15.12■□□□□ 0.01
CTNND1-235ENST00000533189 COG3Q96JB2 828 aa15.12■□□□□ 0.01
CTNND1-235ENST00000533189 GPBP1L1Q9HC44 474 aaPredicted RBP15.12■□□□□ 0.01
CTNND1-235ENST00000533189 MEGF6O75095 1541 aa15.11■□□□□ 0.01
CTNND1-235ENST00000533189 MAP3K19Q56UN5 1328 aa15.11■□□□□ 0.01
CTNND1-235ENST00000533189 FLAD1Q8NFF5 587 aa15.1■□□□□ 0.01
CTNND1-235ENST00000533189 CD2APQ9Y5K6 639 aa15.1■□□□□ 0.01
CTNND1-235ENST00000533189 TAF1LQ8IZX4 1826 aa15.09■□□□□ 0.01
CTNND1-235ENST00000533189 PUS7Q96PZ0 661 aaKnown RBP15.09■□□□□ 0.01
CTNND1-235ENST00000533189 RAPGEF4Q8WZA2 1011 aa15.08■□□□□ 0
CTNND1-235ENST00000533189 CGNL1Q0VF96 1302 aa15.08■□□□□ 0
CTNND1-235ENST00000533189 HSPA6P17066 643 aa15.07■□□□□ 0
CTNND1-235ENST00000533189 ZNF526Q8TF50 670 aaPredicted RBP15.07■□□□□ 0
CTNND1-235ENST00000533189 RTL1A6NKG5 1358 aa15.07■□□□□ 0
CTNND1-235ENST00000533189 SMG6Q86US8 1419 aaKnown RBP15.07■□□□□ 0
CTNND1-235ENST00000533189 TATP17735 454 aaPredicted RBP15.06■□□□□ 0
CTNND1-235ENST00000533189 FBLN1P23142 703 aa15.06■□□□□ 0
CTNND1-235ENST00000533189 NBPF6Q5VWK0 638 aa15.05■□□□□ -0
CTNND1-235ENST00000533189 USHBP1Q8N6Y0 703 aa15.05■□□□□ -0
CTNND1-235ENST00000533189 NBPF4Q96M43 638 aa15.05■□□□□ -0
CTNND1-235ENST00000533189 ADCY9O60503 1353 aa15.05■□□□□ -0
CTNND1-235ENST00000533189 PALLDQ8WX93 1383 aa15.05■□□□□ -0
CTNND1-235ENST00000533189 C4BP0C0L5 1744 aa15.04■□□□□ -0
CTNND1-235ENST00000533189 PCDH11XQ9BZA7 1347 aa15.04■□□□□ -0
CTNND1-235ENST00000533189 PCDH11YQ9BZA8 1340 aa15.04■□□□□ -0
CTNND1-235ENST00000533189 MPRIPQ6WCQ1 1025 aa15.04■□□□□ -0
CTNND1-235ENST00000533189 AK7Q96M32 723 aa15.04■□□□□ -0
CTNND1-235ENST00000533189 ITGB4P16144 1822 aa15.03■□□□□ -0
CTNND1-235ENST00000533189 RRS1Q15050 365 aaKnown RBP15.03■□□□□ -0
CTNND1-235ENST00000533189 NSD3Q9BZ95 1437 aa15.02■□□□□ -0
CTNND1-235ENST00000533189 UBR3Q6ZT12 1888 aa15.02■□□□□ -0
CTNND1-235ENST00000533189 IGSF1Q8N6C5 1336 aa15.02■□□□□ -0
CTNND1-235ENST00000533189 SMARCC1Q92922 1105 aaPredicted RBP15.02■□□□□ -0
CTNND1-235ENST00000533189 SLC24A1O60721 1099 aa15.01□□□□□ -0.01
CTNND1-235ENST00000533189 PHF14O94880 888 aa15.01□□□□□ -0.01
CTNND1-235ENST00000533189 WWC3Q9ULE0 1092 aa15.01□□□□□ -0.01
CTNND1-235ENST00000533189 TOGARAM1Q9Y4F4 1720 aa15□□□□□ -0.01
CTNND1-235ENST00000533189 GGNBP2Q9H3C7 697 aa14.99□□□□□ -0.01
CTNND1-235ENST00000533189 TONSLQ96HA7 1378 aa14.98□□□□□ -0.01
CTNND1-235ENST00000533189 ST20-MTHFSA0A0A6YYL1 179 aa14.98□□□□□ -0.01
CTNND1-235ENST00000533189 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.98□□□□□ -0.01
CTNND1-235ENST00000533189 TESK2Q96S53 571 aa14.98□□□□□ -0.01
CTNND1-235ENST00000533189 KIF20BQ96Q89 1820 aa14.98□□□□□ -0.01
CTNND1-235ENST00000533189 INSRP06213 1382 aa14.98□□□□□ -0.01
CTNND1-235ENST00000533189 FYB1O15117 783 aa14.97□□□□□ -0.01
CTNND1-235ENST00000533189 CYP27B1O15528 508 aa14.97□□□□□ -0.01
CTNND1-235ENST00000533189 SSFA2P28290 1259 aa14.97□□□□□ -0.01
CTNND1-235ENST00000533189 FLT4P35916 1363 aa14.97□□□□□ -0.01
CTNND1-235ENST00000533189 HSP90AB2PQ58FF8 381 aa14.96□□□□□ -0.01
CTNND1-235ENST00000533189 SMIM5Q71RC9 77 aa14.96□□□□□ -0.01
CTNND1-235ENST00000533189 PKD1L3Q7Z443 1732 aa14.96□□□□□ -0.01
CTNND1-235ENST00000533189 AMIGO3Q86WK7 504 aa14.96□□□□□ -0.01
CTNND1-235ENST00000533189 MAP2P11137 1827 aaKnown RBP14.95□□□□□ -0.02
CTNND1-235ENST00000533189 KIF3CO14782 793 aa14.95□□□□□ -0.02
CTNND1-235ENST00000533189 APLP1P51693 650 aa14.95□□□□□ -0.02
CTNND1-235ENST00000533189 PIGBQ92521 554 aa14.95□□□□□ -0.02
CTNND1-235ENST00000533189 KIF24Q5T7B8 1368 aa14.95□□□□□ -0.02
CTNND1-235ENST00000533189 LOC102724428A0A0B4J2F2 783 aa14.94□□□□□ -0.02
CTNND1-235ENST00000533189 SIK1P57059 783 aa14.94□□□□□ -0.02
CTNND1-235ENST00000533189 CICQ96RK0 1608 aaPredicted RBP14.94□□□□□ -0.02
CTNND1-235ENST00000533189 GNPATO15228 680 aa14.93□□□□□ -0.02
CTNND1-235ENST00000533189 LINC00116Q8NCU8 138 aa14.93□□□□□ -0.02
CTNND1-235ENST00000533189 SPG7Q9UQ90 795 aa14.93□□□□□ -0.02
CTNND1-235ENST00000533189 KIF13BQ9NQT8 1826 aa14.92□□□□□ -0.02
CTNND1-235ENST00000533189 TMOD3Q9NYL9 352 aa14.92□□□□□ -0.02
CTNND1-235ENST00000533189 N4BP2Q86UW6 1770 aaPredicted RBP14.92□□□□□ -0.02
CTNND1-235ENST00000533189 TOMM70O94826 608 aa14.91□□□□□ -0.02
CTNND1-235ENST00000533189 MMP10P09238 476 aa14.91□□□□□ -0.02
CTNND1-235ENST00000533189 ATP6V1AP38606 617 aa14.91□□□□□ -0.02
CTNND1-235ENST00000533189 TMF1P82094 1093 aa14.91□□□□□ -0.02
CTNND1-235ENST00000533189 NKX1-1Q15270 411 aaPredicted RBP14.91□□□□□ -0.02
CTNND1-235ENST00000533189 BCS1LQ9Y276 419 aa14.9□□□□□ -0.02
CTNND1-235ENST00000533189 PXDNLA1KZ92 1463 aa14.89□□□□□ -0.03
CTNND1-235ENST00000533189 TGFB2P61812 414 aa14.89□□□□□ -0.03
CTNND1-235ENST00000533189 ITPK1Q13572 414 aa14.89□□□□□ -0.03
CTNND1-235ENST00000533189 EMILIN1Q9Y6C2 1016 aa14.89□□□□□ -0.03
CTNND1-235ENST00000533189 KIAA1551Q9HCM1 1747 aa14.89□□□□□ -0.03
CTNND1-235ENST00000533189 PPM1GO15355 546 aaPredicted RBP14.88□□□□□ -0.03
CTNND1-235ENST00000533189 ARHGAP27Q6ZUM4 889 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms