RNA–Protein interactions for RNA: ENST00000533157.5

FRG1-207, Transcript of FSHD region gene 1, humanhuman

TSL 5

Gene FRG1, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG1-207ENST00000533157 CDCA8Q53HL2 280 aa12.38□□□□□ -0.43
FRG1-207ENST00000533157 RTL1A6NKG5 1358 aa12.38□□□□□ -0.43
FRG1-207ENST00000533157 POLD1P28340 1107 aa12.37□□□□□ -0.43
FRG1-207ENST00000533157 HSP90AB2PQ58FF8 381 aa12.37□□□□□ -0.43
FRG1-207ENST00000533157 SLC16A10Q8TF71 515 aa12.37□□□□□ -0.43
FRG1-207ENST00000533157 CCNL1Q9UK58 526 aaPredicted RBP12.37□□□□□ -0.43
FRG1-207ENST00000533157 MYOM1P52179 1685 aa12.37□□□□□ -0.43
FRG1-207ENST00000533157 MEGF6O75095 1541 aa12.37□□□□□ -0.43
FRG1-207ENST00000533157 SMG6Q86US8 1419 aaKnown RBP12.37□□□□□ -0.43
FRG1-207ENST00000533157 PNPLA7Q6ZV29 1317 aa12.37□□□□□ -0.43
FRG1-207ENST00000533157 MSH5O43196 834 aa12.36□□□□□ -0.43
FRG1-207ENST00000533157 TATP17735 454 aaPredicted RBP12.36□□□□□ -0.43
FRG1-207ENST00000533157 LTN1O94822 1766 aa12.35□□□□□ -0.43
FRG1-207ENST00000533157 NSD2O96028 1365 aa12.35□□□□□ -0.43
FRG1-207ENST00000533157 GPR162Q16538 588 aa12.35□□□□□ -0.43
FRG1-207ENST00000533157 CGNL1Q0VF96 1302 aa12.35□□□□□ -0.43
FRG1-207ENST00000533157 PAPPAQ13219 1627 aa12.34□□□□□ -0.43
FRG1-207ENST00000533157 PPM1GO15355 546 aaPredicted RBP12.34□□□□□ -0.43
FRG1-207ENST00000533157 PELP1Q8IZL8 1130 aaKnown RBP12.34□□□□□ -0.43
FRG1-207ENST00000533157 ZNF784Q8NCA9 323 aaPredicted RBP12.34□□□□□ -0.43
FRG1-207ENST00000533157 CARD14Q9BXL6 1004 aa12.34□□□□□ -0.43
FRG1-207ENST00000533157 INSRP06213 1382 aa12.33□□□□□ -0.44
FRG1-207ENST00000533157 FLT4P35916 1363 aa12.33□□□□□ -0.44
FRG1-207ENST00000533157 MAP3K5Q99683 1374 aa12.33□□□□□ -0.44
FRG1-207ENST00000533157 PCDH11XQ9BZA7 1347 aa12.33□□□□□ -0.44
FRG1-207ENST00000533157 PCDH11YQ9BZA8 1340 aa12.33□□□□□ -0.44
FRG1-207ENST00000533157 MPRIPQ6WCQ1 1025 aa12.32□□□□□ -0.44
FRG1-207ENST00000533157 EMILIN1Q9Y6C2 1016 aa12.32□□□□□ -0.44
FRG1-207ENST00000533157 BTAF1O14981 1849 aa12.32□□□□□ -0.44
FRG1-207ENST00000533157 NSD3Q9BZ95 1437 aa12.31□□□□□ -0.44
FRG1-207ENST00000533157 COL23A1Q86Y22 540 aaPredicted RBP12.31□□□□□ -0.44
FRG1-207ENST00000533157 POLR3GLQ9BT43 218 aa12.31□□□□□ -0.44
FRG1-207ENST00000533157 KIF24Q5T7B8 1368 aa12.3□□□□□ -0.44
FRG1-207ENST00000533157 CYP27B1O15528 508 aa12.3□□□□□ -0.44
FRG1-207ENST00000533157 MSL1Q68DK7 614 aa12.3□□□□□ -0.44
FRG1-207ENST00000533157 NLGN2Q8NFZ4 835 aa12.3□□□□□ -0.44
FRG1-207ENST00000533157 PALLDQ8WX93 1383 aa12.3□□□□□ -0.44
FRG1-207ENST00000533157 FAM208AQ9UK61 1670 aaKnown RBP12.29□□□□□ -0.44
FRG1-207ENST00000533157 PCGF6Q9BYE7 350 aa12.29□□□□□ -0.44
FRG1-207ENST00000533157 TIMELESSQ9UNS1 1208 aa12.28□□□□□ -0.44
FRG1-207ENST00000533157 SPG7Q9UQ90 795 aa12.28□□□□□ -0.44
FRG1-207ENST00000533157 HMGB2P26583 209 aaKnown RBP12.27□□□□□ -0.45
FRG1-207ENST00000533157 SMARCC1Q92922 1105 aaPredicted RBP12.27□□□□□ -0.45
FRG1-207ENST00000533157 TNNT2P45379 298 aaPredicted RBP12.26□□□□□ -0.45
FRG1-207ENST00000533157 FLAD1Q8NFF5 587 aa12.26□□□□□ -0.45
FRG1-207ENST00000533157 PIGBQ92521 554 aa12.26□□□□□ -0.45
FRG1-207ENST00000533157 AK7Q96M32 723 aa12.26□□□□□ -0.45
FRG1-207ENST00000533157 EYA1Q99502 592 aa12.26□□□□□ -0.45
FRG1-207ENST00000533157 WASHC2AQ641Q2 1341 aa12.26□□□□□ -0.45
FRG1-207ENST00000533157 DOT1LQ8TEK3 1739 aa12.25□□□□□ -0.45
FRG1-207ENST00000533157 PHF14O94880 888 aa12.25□□□□□ -0.45
FRG1-207ENST00000533157 POLKQ9UBT6 870 aa12.25□□□□□ -0.45
FRG1-207ENST00000533157 GRIN3BO60391 1043 aa12.24□□□□□ -0.45
FRG1-207ENST00000533157 YBX3P16989 372 aaKnown RBP eCLIP12.24□□□□□ -0.45
FRG1-207ENST00000533157 NKX1-1Q15270 411 aaPredicted RBP12.24□□□□□ -0.45
FRG1-207ENST00000533157 SMIM5Q71RC9 77 aa12.24□□□□□ -0.45
FRG1-207ENST00000533157 TMOD3Q9NYL9 352 aa12.24□□□□□ -0.45
FRG1-207ENST00000533157 SENP3-EIF4A1A0A087X0R7 540 aa12.23□□□□□ -0.45
FRG1-207ENST00000533157 C1QTNF8P60827 252 aa12.23□□□□□ -0.45
FRG1-207ENST00000533157 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.23□□□□□ -0.45
FRG1-207ENST00000533157 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.22□□□□□ -0.45
FRG1-207ENST00000533157 LOC102724428A0A0B4J2F2 783 aa12.22□□□□□ -0.45
FRG1-207ENST00000533157 SIK1P57059 783 aa12.22□□□□□ -0.45
FRG1-207ENST00000533157 EIF4A2Q14240 407 aaKnown RBP12.22□□□□□ -0.45
FRG1-207ENST00000533157 AMIGO3Q86WK7 504 aa12.22□□□□□ -0.45
FRG1-207ENST00000533157 IFNL2Q8IZJ0 200 aa12.22□□□□□ -0.45
FRG1-207ENST00000533157 CD2APQ9Y5K6 639 aa12.22□□□□□ -0.45
FRG1-207ENST00000533157 RGPD2P0DJD1 1756 aa12.21□□□□□ -0.45
FRG1-207ENST00000533157 CLSPNQ9HAW4 1339 aa12.21□□□□□ -0.45
FRG1-207ENST00000533157 SHANK3Q9BYB0 1731 aa12.21□□□□□ -0.45
FRG1-207ENST00000533157 GIGYF1O75420 1035 aaPredicted RBP12.21□□□□□ -0.45
FRG1-207ENST00000533157 PHKG2P15735 406 aa12.21□□□□□ -0.45
FRG1-207ENST00000533157 LINC00116Q8NCU8 138 aa12.21□□□□□ -0.45
FRG1-207ENST00000533157 ASAP1Q9ULH1 1129 aa12.21□□□□□ -0.45
FRG1-207ENST00000533157 NCAPD2Q15021 1401 aa12.2□□□□□ -0.46
FRG1-207ENST00000533157 KAT6BQ8WYB5 2073 aa12.2□□□□□ -0.46
FRG1-207ENST00000533157 GNPATO15228 680 aa12.2□□□□□ -0.46
FRG1-207ENST00000533157 ATP6V1AP38606 617 aa12.2□□□□□ -0.46
FRG1-207ENST00000533157 EIF4G2P78344 907 aaKnown RBP eCLIP12.2□□□□□ -0.46
FRG1-207ENST00000533157 PANK3Q9H999 370 aa12.2□□□□□ -0.46
FRG1-207ENST00000533157 HSPA5P11021 654 aaKnown RBP12.19□□□□□ -0.46
FRG1-207ENST00000533157 SSFA2P28290 1259 aa12.19□□□□□ -0.46
FRG1-207ENST00000533157 ITPK1Q13572 414 aa12.19□□□□□ -0.46
FRG1-207ENST00000533157 ATG3Q9NT62 314 aa12.19□□□□□ -0.46
FRG1-207ENST00000533157 WWC3Q9ULE0 1092 aa12.19□□□□□ -0.46
FRG1-207ENST00000533157 LY75O60449 1722 aa12.19□□□□□ -0.46
FRG1-207ENST00000533157 QSER1Q2KHR3 1735 aa12.17□□□□□ -0.46
FRG1-207ENST00000533157 KIF20BQ96Q89 1820 aa12.17□□□□□ -0.46
FRG1-207ENST00000533157 PLEKHO1Q53GL0 409 aaPredicted RBP12.17□□□□□ -0.46
FRG1-207ENST00000533157 RBM42Q9BTD8 480 aaKnown RBP12.17□□□□□ -0.46
FRG1-207ENST00000533157 IGSF1Q8N6C5 1336 aa12.16□□□□□ -0.46
FRG1-207ENST00000533157 HSP90AB1P08238 724 aaKnown RBP12.16□□□□□ -0.46
FRG1-207ENST00000533157 MORC1Q86VD1 984 aa12.16□□□□□ -0.46
FRG1-207ENST00000533157 CCER1Q8TC90 406 aaPredicted RBP12.16□□□□□ -0.46
FRG1-207ENST00000533157 MMP10P09238 476 aa12.15□□□□□ -0.46
FRG1-207ENST00000533157 CABP4P57796 275 aa12.15□□□□□ -0.46
FRG1-207ENST00000533157 ZNF530Q6P9A1 599 aaPredicted RBP12.15□□□□□ -0.46
FRG1-207ENST00000533157 DCAF5Q96JK2 942 aa12.15□□□□□ -0.46
FRG1-207ENST00000533157 RTCBQ9Y3I0 505 aaKnown RBP12.15□□□□□ -0.46
FRG1-207ENST00000533157 TUBGCP6Q96RT7 1819 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms