RNA–Protein interactions for RNA: ENST00000533062.5

CHORDC1-208, Transcript of cysteine and histidine rich domain containing 1, humanhuman

TSL 4

Gene CHORDC1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHORDC1-208ENST00000533062 TATP17735 454 aaPredicted RBP15.67■□□□□ 0.1
CHORDC1-208ENST00000533062 EIF4A2Q14240 407 aaKnown RBP15.67■□□□□ 0.1
CHORDC1-208ENST00000533062 BCL9O00512 1426 aa15.67■□□□□ 0.1
CHORDC1-208ENST00000533062 SBF2Q86WG5 1849 aa15.66■□□□□ 0.1
CHORDC1-208ENST00000533062 R3HDM1Q15032 1099 aaKnown RBP15.64■□□□□ 0.09
CHORDC1-208ENST00000533062 PLSCR1O15162 318 aa15.63■□□□□ 0.09
CHORDC1-208ENST00000533062 PROM2Q8N271 834 aa15.63■□□□□ 0.09
CHORDC1-208ENST00000533062 SYTL4Q96C24 671 aaPredicted RBP15.63■□□□□ 0.09
CHORDC1-208ENST00000533062 PARD3Q8TEW0 1356 aa15.62■□□□□ 0.09
CHORDC1-208ENST00000533062 PRIM1P49642 420 aaKnown RBP15.61■□□□□ 0.09
CHORDC1-208ENST00000533062 MTHFSP49914 203 aa15.61■□□□□ 0.09
CHORDC1-208ENST00000533062 NCAPD2Q15021 1401 aa15.6■□□□□ 0.09
CHORDC1-208ENST00000533062 SHANK3Q9BYB0 1731 aa15.6■□□□□ 0.09
CHORDC1-208ENST00000533062 CYP27B1O15528 508 aa15.6■□□□□ 0.09
CHORDC1-208ENST00000533062 NHSQ6T4R5 1651 aa15.6■□□□□ 0.09
CHORDC1-208ENST00000533062 TXNRD1Q16881 649 aa15.59■□□□□ 0.09
CHORDC1-208ENST00000533062 AEBP1Q8IUX7 1158 aa15.59■□□□□ 0.09
CHORDC1-208ENST00000533062 RREB1Q92766 1687 aa15.59■□□□□ 0.09
CHORDC1-208ENST00000533062 PCDH11XQ9BZA7 1347 aa15.59■□□□□ 0.09
CHORDC1-208ENST00000533062 PCDH11YQ9BZA8 1340 aa15.59■□□□□ 0.09
CHORDC1-208ENST00000533062 NUP188Q5SRE5 1749 aa15.58■□□□□ 0.08
CHORDC1-208ENST00000533062 ANO8Q9HCE9 1232 aaPredicted RBP15.58■□□□□ 0.08
CHORDC1-208ENST00000533062 IGSF1Q8N6C5 1336 aa15.58■□□□□ 0.08
CHORDC1-208ENST00000533062 KAT6BQ8WYB5 2073 aa15.58■□□□□ 0.08
CHORDC1-208ENST00000533062 IL13P35225 146 aa15.57■□□□□ 0.08
CHORDC1-208ENST00000533062 NBPF14Q5TI25 921 aa15.57■□□□□ 0.08
CHORDC1-208ENST00000533062 SPG7Q9UQ90 795 aa15.57■□□□□ 0.08
CHORDC1-208ENST00000533062 SULT6B1Q6IMI4 303 aa15.56■□□□□ 0.08
CHORDC1-208ENST00000533062 NPC1L1Q9UHC9 1359 aa15.56■□□□□ 0.08
CHORDC1-208ENST00000533062 BTAF1O14981 1849 aa15.55■□□□□ 0.08
CHORDC1-208ENST00000533062 DOT1LQ8TEK3 1739 aa15.55■□□□□ 0.08
CHORDC1-208ENST00000533062 KCNQ4P56696 695 aa15.55■□□□□ 0.08
CHORDC1-208ENST00000533062 MPRIPQ6WCQ1 1025 aa15.54■□□□□ 0.08
CHORDC1-208ENST00000533062 LRRC4BQ9NT99 713 aa15.54■□□□□ 0.08
CHORDC1-208ENST00000533062 HMOX1P09601 288 aa15.53■□□□□ 0.08
CHORDC1-208ENST00000533062 PHKG2P15735 406 aa15.53■□□□□ 0.08
CHORDC1-208ENST00000533062 RGPD3A6NKT7 1758 aaPredicted RBP15.53■□□□□ 0.08
CHORDC1-208ENST00000533062 RGPD4Q7Z3J3 1758 aa15.53■□□□□ 0.08
CHORDC1-208ENST00000533062 PKD1L3Q7Z443 1732 aa15.53■□□□□ 0.08
CHORDC1-208ENST00000533062 DIAPH1O60610 1272 aaKnown RBP15.52■□□□□ 0.08
CHORDC1-208ENST00000533062 IFNL2Q8IZJ0 200 aa15.52■□□□□ 0.08
CHORDC1-208ENST00000533062 PDGFDQ9GZP0 370 aaPredicted RBP15.52■□□□□ 0.08
CHORDC1-208ENST00000533062 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.52■□□□□ 0.082e-6■□□□□ 10.5
CHORDC1-208ENST00000533062 NKX1-1Q15270 411 aaPredicted RBP15.51■□□□□ 0.07
CHORDC1-208ENST00000533062 PLEKHO1Q53GL0 409 aaPredicted RBP15.51■□□□□ 0.07
CHORDC1-208ENST00000533062 ZNF530Q6P9A1 599 aaPredicted RBP15.5■□□□□ 0.07
CHORDC1-208ENST00000533062 STK32BQ9NY57 414 aa15.5■□□□□ 0.07
CHORDC1-208ENST00000533062 TOGARAM1Q9Y4F4 1720 aa15.49■□□□□ 0.07
CHORDC1-208ENST00000533062 U2SURPO15042 1029 aaKnown RBP15.49■□□□□ 0.07
CHORDC1-208ENST00000533062 PPP2R1AP30153 589 aa15.49■□□□□ 0.07
CHORDC1-208ENST00000533062 DDX10Q13206 875 aaKnown RBP15.49■□□□□ 0.07
CHORDC1-208ENST00000533062 SLC15A2Q16348 729 aa15.49■□□□□ 0.07
CHORDC1-208ENST00000533062 PIGBQ92521 554 aa15.49■□□□□ 0.07
CHORDC1-208ENST00000533062 KDRP35968 1356 aa15.49■□□□□ 0.07
CHORDC1-208ENST00000533062 ZNF827Q17R98 1081 aa15.48■□□□□ 0.07
CHORDC1-208ENST00000533062 AMOTQ4VCS5 1084 aa15.48■□□□□ 0.07
CHORDC1-208ENST00000533062 COL3A1P02461 1466 aaPredicted RBP15.47■□□□□ 0.07
CHORDC1-208ENST00000533062 CCNL1Q9UK58 526 aaPredicted RBP15.47■□□□□ 0.07
CHORDC1-208ENST00000533062 SLC27A3Q5K4L6 730 aa15.46■□□□□ 0.07
CHORDC1-208ENST00000533062 TMOD3Q9NYL9 352 aa15.46■□□□□ 0.07
CHORDC1-208ENST00000533062 PALLDQ8WX93 1383 aa15.46■□□□□ 0.07
CHORDC1-208ENST00000533062 ZBTB7AO95365 584 aa15.45■□□□□ 0.06
CHORDC1-208ENST00000533062 C1orf141Q5JVX7 400 aa15.45■□□□□ 0.06
CHORDC1-208ENST00000533062 ASAP1Q9ULH1 1129 aa15.45■□□□□ 0.06
CHORDC1-208ENST00000533062 ZEB1P37275 1124 aaPredicted RBP15.44■□□□□ 0.06
CHORDC1-208ENST00000533062 AKT1S1Q96B36 256 aa15.44■□□□□ 0.06
CHORDC1-208ENST00000533062 DCAF5Q96JK2 942 aa15.44■□□□□ 0.06
CHORDC1-208ENST00000533062 CFAP53Q96M91 514 aa15.44■□□□□ 0.06
CHORDC1-208ENST00000533062 PLEKHG2Q9H7P9 1386 aa15.44■□□□□ 0.06
CHORDC1-208ENST00000533062 KDM6AO15550 1401 aaPredicted RBP15.43■□□□□ 0.06
CHORDC1-208ENST00000533062 PAPPAQ13219 1627 aa15.43■□□□□ 0.06
CHORDC1-208ENST00000533062 ITGB4P16144 1822 aa15.43■□□□□ 0.06
CHORDC1-208ENST00000533062 MTHFSDQ2M296 383 aaKnown RBP15.43■□□□□ 0.06
CHORDC1-208ENST00000533062 LY75O60449 1722 aa15.43■□□□□ 0.06
CHORDC1-208ENST00000533062 HSP90AB1P08238 724 aaKnown RBP15.42■□□□□ 0.06
CHORDC1-208ENST00000533062 SMARCC1Q92922 1105 aaPredicted RBP15.42■□□□□ 0.06
CHORDC1-208ENST00000533062 ATG3Q9NT62 314 aa15.42■□□□□ 0.06
CHORDC1-208ENST00000533062 TFCP2L1Q9NZI6 479 aa15.42■□□□□ 0.06
CHORDC1-208ENST00000533062 ATF5Q9Y2D1 282 aaPredicted RBP15.42■□□□□ 0.06
CHORDC1-208ENST00000533062 ERVV-2B6SEH9 535 aa15.41■□□□□ 0.06
CHORDC1-208ENST00000533062 CABP4P57796 275 aa15.41■□□□□ 0.06
CHORDC1-208ENST00000533062 LGR6Q9HBX8 967 aa15.41■□□□□ 0.06
CHORDC1-208ENST00000533062 SPON1Q9HCB6 807 aa15.41■□□□□ 0.06
CHORDC1-208ENST00000533062 LRP5O75197 1615 aa15.41■□□□□ 0.06
CHORDC1-208ENST00000533062 AKAP4Q5JQC9 854 aa15.4■□□□□ 0.06
CHORDC1-208ENST00000533062 NFATC2IPQ8NCF5 419 aa15.4■□□□□ 0.06
CHORDC1-208ENST00000533062 CASZ1Q86V15 1759 aa15.39■□□□□ 0.05
CHORDC1-208ENST00000533062 LOC102724428A0A0B4J2F2 783 aa15.39■□□□□ 0.05
CHORDC1-208ENST00000533062 U2AF1L5P0DN76 240 aaPredicted RBP15.39■□□□□ 0.05
CHORDC1-208ENST00000533062 SIK1P57059 783 aa15.39■□□□□ 0.05
CHORDC1-208ENST00000533062 U2AF1Q01081 240 aaKnown RBP eCLIP15.39■□□□□ 0.057e-11■■■■□ 22.1
CHORDC1-208ENST00000533062 PHACTR3Q96KR7 559 aa15.39■□□□□ 0.05
CHORDC1-208ENST00000533062 NUDCQ9Y266 331 aa15.39■□□□□ 0.05
CHORDC1-208ENST00000533062 PNPLA7Q6ZV29 1317 aa15.39■□□□□ 0.05
CHORDC1-208ENST00000533062 PRKAR2BP31323 418 aa15.38■□□□□ 0.05
CHORDC1-208ENST00000533062 SMIM5Q71RC9 77 aa15.38■□□□□ 0.05
CHORDC1-208ENST00000533062 RSPH6AQ9H0K4 717 aa15.38■□□□□ 0.05
CHORDC1-208ENST00000533062 RNMTO43148 476 aaKnown RBP15.37■□□□□ 0.05
CHORDC1-208ENST00000533062 MSH5O43196 834 aa15.37■□□□□ 0.05
CHORDC1-208ENST00000533062 ATP6V1AP38606 617 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms