RNA–Protein interactions for RNA: ENST00000532656.6

CTSB-226, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-226ENST00000532656 GGNBP2Q9H3C7 697 aa24.07■■□□□ 1.44
CTSB-226ENST00000532656 QSER1Q2KHR3 1735 aa24.07■■□□□ 1.44
CTSB-226ENST00000532656 RTL1A6NKG5 1358 aa24.06■■□□□ 1.44
CTSB-226ENST00000532656 NSD2O96028 1365 aa24.06■■□□□ 1.44
CTSB-226ENST00000532656 TUBGCP6Q96RT7 1819 aa24.06■■□□□ 1.44
CTSB-226ENST00000532656 USHBP1Q8N6Y0 703 aa24.05■■□□□ 1.44
CTSB-226ENST00000532656 PNPLA7Q6ZV29 1317 aa24.05■■□□□ 1.44
CTSB-226ENST00000532656 FYB1O15117 783 aa24.04■■□□□ 1.44
CTSB-226ENST00000532656 NBPF6Q5VWK0 638 aa24.04■■□□□ 1.44
CTSB-226ENST00000532656 NBPF4Q96M43 638 aa24.04■■□□□ 1.44
CTSB-226ENST00000532656 TFCP2L1Q9NZI6 479 aa24.04■■□□□ 1.44
CTSB-226ENST00000532656 LY75O60449 1722 aa24.04■■□□□ 1.44
CTSB-226ENST00000532656 USP47Q96K76 1375 aa24.03■■□□□ 1.44
CTSB-226ENST00000532656 MAP3K5Q99683 1374 aa24.03■■□□□ 1.44
CTSB-226ENST00000532656 TMF1P82094 1093 aa24.03■■□□□ 1.44
CTSB-226ENST00000532656 ZNF784Q8NCA9 323 aaPredicted RBP24.03■■□□□ 1.44
CTSB-226ENST00000532656 KLHL34Q8N239 644 aa24.02■■□□□ 1.44
CTSB-226ENST00000532656 SLC16A10Q8TF71 515 aa24.02■■□□□ 1.44
CTSB-226ENST00000532656 SMG6Q86US8 1419 aaKnown RBP24.01■■□□□ 1.43
CTSB-226ENST00000532656 CHD4Q14839 1912 aa24.01■■□□□ 1.43
CTSB-226ENST00000532656 POLD1P28340 1107 aa24■■□□□ 1.43
CTSB-226ENST00000532656 KIF20BQ96Q89 1820 aa24■■□□□ 1.43
CTSB-226ENST00000532656 COL24A1Q17RW2 1714 aa23.99■■□□□ 1.43
CTSB-226ENST00000532656 RAPGEF4Q8WZA2 1011 aa23.99■■□□□ 1.43
CTSB-226ENST00000532656 CCNL1Q9UK58 526 aaPredicted RBP23.99■■□□□ 1.43
CTSB-226ENST00000532656 CGNL1Q0VF96 1302 aa23.97■■□□□ 1.43
CTSB-226ENST00000532656 GPR162Q16538 588 aa23.97■■□□□ 1.43
CTSB-226ENST00000532656 HSP90AB2PQ58FF8 381 aa23.97■■□□□ 1.43
CTSB-226ENST00000532656 GOLGB1Q14789 3259 aaKnown RBP23.96■■□□□ 1.43
CTSB-226ENST00000532656 TATP17735 454 aaPredicted RBP23.96■■□□□ 1.43
CTSB-226ENST00000532656 INSRP06213 1382 aa23.95■■□□□ 1.42
CTSB-226ENST00000532656 FLT4P35916 1363 aa23.94■■□□□ 1.42
CTSB-226ENST00000532656 MSH5O43196 834 aa23.94■■□□□ 1.42
CTSB-226ENST00000532656 PELP1Q8IZL8 1130 aaKnown RBP23.93■■□□□ 1.42
CTSB-226ENST00000532656 PCDH11XQ9BZA7 1347 aa23.92■■□□□ 1.42
CTSB-226ENST00000532656 PCDH11YQ9BZA8 1340 aa23.92■■□□□ 1.42
CTSB-226ENST00000532656 CDCA8Q53HL2 280 aa23.92■■□□□ 1.42
CTSB-226ENST00000532656 NLGN2Q8NFZ4 835 aa23.92■■□□□ 1.42
CTSB-226ENST00000532656 COL23A1Q86Y22 540 aaPredicted RBP23.91■■□□□ 1.42
CTSB-226ENST00000532656 C5P01031 1676 aa23.9■■□□□ 1.42
CTSB-226ENST00000532656 CARD14Q9BXL6 1004 aa23.9■■□□□ 1.42
CTSB-226ENST00000532656 EMILIN1Q9Y6C2 1016 aa23.9■■□□□ 1.42
CTSB-226ENST00000532656 NSD3Q9BZ95 1437 aa23.9■■□□□ 1.42
CTSB-226ENST00000532656 KIF24Q5T7B8 1368 aa23.9■■□□□ 1.42
CTSB-226ENST00000532656 MSL1Q68DK7 614 aa23.88■■□□□ 1.41
CTSB-226ENST00000532656 TOGARAM1Q9Y4F4 1720 aa23.87■■□□□ 1.41
CTSB-226ENST00000532656 CYP27B1O15528 508 aa23.87■■□□□ 1.41
CTSB-226ENST00000532656 TRIM26Q12899 539 aaPredicted RBP23.87■■□□□ 1.41
CTSB-226ENST00000532656 MPRIPQ6WCQ1 1025 aa23.87■■□□□ 1.41
CTSB-226ENST00000532656 PALLDQ8WX93 1383 aa23.87■■□□□ 1.41
CTSB-226ENST00000532656 PKD1L3Q7Z443 1732 aa23.85■■□□□ 1.41
CTSB-226ENST00000532656 TAF1LQ8IZX4 1826 aa23.85■■□□□ 1.41
CTSB-226ENST00000532656 PPM1GO15355 546 aaPredicted RBP23.85■■□□□ 1.41
CTSB-226ENST00000532656 ITGB4P16144 1822 aa23.84■■□□□ 1.41
CTSB-226ENST00000532656 ANKRD26Q9UPS8 1709 aa23.81■■□□□ 1.4
CTSB-226ENST00000532656 NCAPD2Q15021 1401 aa23.81■■□□□ 1.4
CTSB-226ENST00000532656 C4BP0C0L5 1744 aa23.8■■□□□ 1.4
CTSB-226ENST00000532656 YBX3P16989 372 aaKnown RBP eCLIP23.8■■□□□ 1.4
CTSB-226ENST00000532656 C1QTNF8P60827 252 aa23.8■■□□□ 1.4
CTSB-226ENST00000532656 SMARCC1Q92922 1105 aaPredicted RBP23.79■■□□□ 1.4
CTSB-226ENST00000532656 MAP2P11137 1827 aaKnown RBP23.78■■□□□ 1.4
CTSB-226ENST00000532656 SENP3-EIF4A1A0A087X0R7 540 aa23.78■■□□□ 1.4
CTSB-226ENST00000532656 FLAD1Q8NFF5 587 aa23.78■■□□□ 1.4
CTSB-226ENST00000532656 PIGBQ92521 554 aa23.78■■□□□ 1.4
CTSB-226ENST00000532656 AK7Q96M32 723 aa23.78■■□□□ 1.4
CTSB-226ENST00000532656 AMIGO3Q86WK7 504 aa23.77■■□□□ 1.4
CTSB-226ENST00000532656 SPG7Q9UQ90 795 aa23.77■■□□□ 1.4
CTSB-226ENST00000532656 WASHC2AQ641Q2 1341 aa23.77■■□□□ 1.4
CTSB-226ENST00000532656 HMGB2P26583 209 aaKnown RBP23.76■■□□□ 1.39
CTSB-226ENST00000532656 SMIM5Q71RC9 77 aa23.76■■□□□ 1.39
CTSB-226ENST00000532656 EYA1Q99502 592 aa23.76■■□□□ 1.39
CTSB-226ENST00000532656 GRIN3BO60391 1043 aa23.75■■□□□ 1.39
CTSB-226ENST00000532656 PHF14O94880 888 aa23.75■■□□□ 1.39
CTSB-226ENST00000532656 NKX1-1Q15270 411 aaPredicted RBP23.75■■□□□ 1.39
CTSB-226ENST00000532656 POLR3GLQ9BT43 218 aa23.75■■□□□ 1.39
CTSB-226ENST00000532656 UBR3Q6ZT12 1888 aa23.75■■□□□ 1.39
CTSB-226ENST00000532656 GIGYF1O75420 1035 aaPredicted RBP23.73■■□□□ 1.39
CTSB-226ENST00000532656 POLKQ9UBT6 870 aa23.73■■□□□ 1.39
CTSB-226ENST00000532656 TNNT2P45379 298 aaPredicted RBP23.72■■□□□ 1.39
CTSB-226ENST00000532656 CD2APQ9Y5K6 639 aa23.72■■□□□ 1.39
CTSB-226ENST00000532656 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.71■■□□□ 1.39
CTSB-226ENST00000532656 LOC102724428A0A0B4J2F2 783 aa23.71■■□□□ 1.39
CTSB-226ENST00000532656 SIK1P57059 783 aa23.71■■□□□ 1.39
CTSB-226ENST00000532656 LINC00116Q8NCU8 138 aa23.71■■□□□ 1.39
CTSB-226ENST00000532656 TMOD3Q9NYL9 352 aa23.71■■□□□ 1.39
CTSB-226ENST00000532656 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.7■■□□□ 1.38
CTSB-226ENST00000532656 ASAP1Q9ULH1 1129 aa23.7■■□□□ 1.38
CTSB-226ENST00000532656 TIMELESSQ9UNS1 1208 aa23.7■■□□□ 1.38
CTSB-226ENST00000532656 PHKG2P15735 406 aa23.69■■□□□ 1.38
CTSB-226ENST00000532656 EIF4A2Q14240 407 aaKnown RBP23.68■■□□□ 1.38
CTSB-226ENST00000532656 IFNL2Q8IZJ0 200 aa23.68■■□□□ 1.38
CTSB-226ENST00000532656 SSFA2P28290 1259 aa23.67■■□□□ 1.38
CTSB-226ENST00000532656 ITPK1Q13572 414 aa23.66■■□□□ 1.38
CTSB-226ENST00000532656 WWC3Q9ULE0 1092 aa23.66■■□□□ 1.38
CTSB-226ENST00000532656 GNPATO15228 680 aa23.65■■□□□ 1.38
CTSB-226ENST00000532656 ATP6V1AP38606 617 aa23.65■■□□□ 1.38
CTSB-226ENST00000532656 PCGF6Q9BYE7 350 aa23.64■■□□□ 1.37
CTSB-226ENST00000532656 ATG3Q9NT62 314 aa23.64■■□□□ 1.37
CTSB-226ENST00000532656 ATP10DQ9P241 1426 aa23.64■■□□□ 1.37
CTSB-226ENST00000532656 IGSF1Q8N6C5 1336 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 187.8 ms