RNA–Protein interactions for RNA: ENST00000532490.1

LDLRAD3-205, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-205ENST00000532490 BTAF1O14981 1849 aa21.85■■□□□ 1.09
LDLRAD3-205ENST00000532490 KAT6BQ8WYB5 2073 aa21.84■■□□□ 1.09
LDLRAD3-205ENST00000532490 PANK3Q9H999 370 aa21.84■■□□□ 1.09
LDLRAD3-205ENST00000532490 MAP2P11137 1827 aaKnown RBP21.84■■□□□ 1.09
LDLRAD3-205ENST00000532490 WASHC2AQ641Q2 1341 aa21.81■■□□□ 1.08
LDLRAD3-205ENST00000532490 POLKQ9UBT6 870 aa21.81■■□□□ 1.08
LDLRAD3-205ENST00000532490 NCAPD2Q15021 1401 aa21.8■■□□□ 1.08
LDLRAD3-205ENST00000532490 RAPGEF4Q8WZA2 1011 aa21.79■■□□□ 1.08
LDLRAD3-205ENST00000532490 CASZ1Q86V15 1759 aa21.79■■□□□ 1.08
LDLRAD3-205ENST00000532490 PPM1GO15355 546 aaPredicted RBP21.78■■□□□ 1.08
LDLRAD3-205ENST00000532490 NSD2O96028 1365 aa21.77■■□□□ 1.08
LDLRAD3-205ENST00000532490 TATP17735 454 aaPredicted RBP21.77■■□□□ 1.08
LDLRAD3-205ENST00000532490 PRIM1P49642 420 aaKnown RBP21.77■■□□□ 1.08
LDLRAD3-205ENST00000532490 SLC15A2Q16348 729 aa21.77■■□□□ 1.08
LDLRAD3-205ENST00000532490 PDGFDQ9GZP0 370 aaPredicted RBP21.77■■□□□ 1.08
LDLRAD3-205ENST00000532490 DOT1LQ8TEK3 1739 aa21.77■■□□□ 1.08
LDLRAD3-205ENST00000532490 PAPPAQ13219 1627 aa21.77■■□□□ 1.07
LDLRAD3-205ENST00000532490 LRRC4BQ9NT99 713 aa21.76■■□□□ 1.07
LDLRAD3-205ENST00000532490 STK32BQ9NY57 414 aa21.75■■□□□ 1.07
LDLRAD3-205ENST00000532490 TNNT2P45379 298 aaPredicted RBP21.74■■□□□ 1.07
LDLRAD3-205ENST00000532490 EYA1Q99502 592 aa21.74■■□□□ 1.07
LDLRAD3-205ENST00000532490 SPON1Q9HCB6 807 aa21.74■■□□□ 1.07
LDLRAD3-205ENST00000532490 KIF7Q2M1P5 1343 aa21.74■■□□□ 1.07
LDLRAD3-205ENST00000532490 PKD1L3Q7Z443 1732 aa21.72■■□□□ 1.07
LDLRAD3-205ENST00000532490 CYP27B1O15528 508 aa21.72■■□□□ 1.07
LDLRAD3-205ENST00000532490 SYTL4Q96C24 671 aaPredicted RBP21.72■■□□□ 1.07
LDLRAD3-205ENST00000532490 PCDH11XQ9BZA7 1347 aa21.72■■□□□ 1.07
LDLRAD3-205ENST00000532490 PCDH11YQ9BZA8 1340 aa21.72■■□□□ 1.07
LDLRAD3-205ENST00000532490 EIF4A2Q14240 407 aaKnown RBP21.71■■□□□ 1.07
LDLRAD3-205ENST00000532490 LY75O60449 1722 aa21.7■■□□□ 1.06
LDLRAD3-205ENST00000532490 SLC27A3Q5K4L6 730 aa21.7■■□□□ 1.06
LDLRAD3-205ENST00000532490 ZNF827Q17R98 1081 aa21.69■■□□□ 1.06
LDLRAD3-205ENST00000532490 AMER1Q5JTC6 1135 aaPredicted RBP21.68■■□□□ 1.06
LDLRAD3-205ENST00000532490 AKT1S1Q96B36 256 aa21.68■■□□□ 1.06
LDLRAD3-205ENST00000532490 KNSTRNQ9Y448 316 aa21.68■■□□□ 1.06
LDLRAD3-205ENST00000532490 ZBTB7AO95365 584 aa21.67■■□□□ 1.06
LDLRAD3-205ENST00000532490 MORC1Q86VD1 984 aa21.67■■□□□ 1.06
LDLRAD3-205ENST00000532490 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.67■■□□□ 1.06
LDLRAD3-205ENST00000532490 PTGER2P43116 358 aa21.66■■□□□ 1.06
LDLRAD3-205ENST00000532490 NKX1-1Q15270 411 aaPredicted RBP21.66■■□□□ 1.06
LDLRAD3-205ENST00000532490 TOGARAM1Q9Y4F4 1720 aa21.66■■□□□ 1.06
LDLRAD3-205ENST00000532490 IGSF1Q8N6C5 1336 aa21.65■■□□□ 1.06
LDLRAD3-205ENST00000532490 PER1O15534 1290 aaPredicted RBP21.65■■□□□ 1.06
LDLRAD3-205ENST00000532490 KCNQ4P56696 695 aa21.65■■□□□ 1.06
LDLRAD3-205ENST00000532490 SPG7Q9UQ90 795 aa21.64■■□□□ 1.05
LDLRAD3-205ENST00000532490 ATF5Q9Y2D1 282 aaPredicted RBP21.63■■□□□ 1.05
LDLRAD3-205ENST00000532490 ITGB4P16144 1822 aa21.63■■□□□ 1.05
LDLRAD3-205ENST00000532490 QSER1Q2KHR3 1735 aa21.63■■□□□ 1.05
LDLRAD3-205ENST00000532490 PLEKHG2Q9H7P9 1386 aa21.62■■□□□ 1.05
LDLRAD3-205ENST00000532490 SGIP1Q9BQI5 828 aa21.62■■□□□ 1.05
LDLRAD3-205ENST00000532490 MTFR1LQ9H019 292 aa21.62■■□□□ 1.05
LDLRAD3-205ENST00000532490 PPP1R1BQ9UD71 204 aaPredicted RBP21.62■■□□□ 1.05
LDLRAD3-205ENST00000532490 CCNL1Q9UK58 526 aaPredicted RBP21.61■■□□□ 1.05
LDLRAD3-205ENST00000532490 MPRIPQ6WCQ1 1025 aa21.6■■□□□ 1.05
LDLRAD3-205ENST00000532490 TUBGCP6Q96RT7 1819 aa21.59■■□□□ 1.05
LDLRAD3-205ENST00000532490 PNPLA7Q6ZV29 1317 aa21.59■■□□□ 1.05
LDLRAD3-205ENST00000532490 PHKG2P15735 406 aa21.59■■□□□ 1.05
LDLRAD3-205ENST00000532490 IFNL2Q8IZJ0 200 aa21.58■■□□□ 1.05
LDLRAD3-205ENST00000532490 PIGBQ92521 554 aa21.58■■□□□ 1.05
LDLRAD3-205ENST00000532490 PALLDQ8WX93 1383 aa21.57■■□□□ 1.04
LDLRAD3-205ENST00000532490 IL13P35225 146 aa21.56■■□□□ 1.04
LDLRAD3-205ENST00000532490 AEBP1Q8IUX7 1158 aa21.55■■□□□ 1.04
LDLRAD3-205ENST00000532490 SLC16A10Q8TF71 515 aa21.55■■□□□ 1.04
LDLRAD3-205ENST00000532490 TFCP2L1Q9NZI6 479 aa21.55■■□□□ 1.04
LDLRAD3-205ENST00000532490 COL24A1Q17RW2 1714 aa21.55■■□□□ 1.04
LDLRAD3-205ENST00000532490 SMARCC1Q92922 1105 aaPredicted RBP21.54■■□□□ 1.04
LDLRAD3-205ENST00000532490 TAF1LQ8IZX4 1826 aa21.54■■□□□ 1.04
LDLRAD3-205ENST00000532490 C5P01031 1676 aa21.53■■□□□ 1.04
LDLRAD3-205ENST00000532490 KDRP35968 1356 aa21.53■■□□□ 1.04
LDLRAD3-205ENST00000532490 NPC1L1Q9UHC9 1359 aa21.52■■□□□ 1.04
LDLRAD3-205ENST00000532490 MTHFSP49914 203 aa21.52■■□□□ 1.04
LDLRAD3-205ENST00000532490 PLEKHO1Q53GL0 409 aaPredicted RBP21.52■■□□□ 1.04
LDLRAD3-205ENST00000532490 CC2D1BQ5T0F9 858 aaKnown RBP21.52■■□□□ 1.04
LDLRAD3-205ENST00000532490 TMOD3Q9NYL9 352 aa21.51■■□□□ 1.03
LDLRAD3-205ENST00000532490 AMOTQ4VCS5 1084 aa21.5■■□□□ 1.03
LDLRAD3-205ENST00000532490 SULT6B1Q6IMI4 303 aa21.5■■□□□ 1.03
LDLRAD3-205ENST00000532490 FHDC1Q9C0D6 1143 aaPredicted RBP21.5■■□□□ 1.03
LDLRAD3-205ENST00000532490 COL23A1Q86Y22 540 aaPredicted RBP21.49■■□□□ 1.03
LDLRAD3-205ENST00000532490 ARXQ96QS3 562 aa21.49■■□□□ 1.03
LDLRAD3-205ENST00000532490 SYT17Q9BSW7 474 aa21.49■■□□□ 1.03
LDLRAD3-205ENST00000532490 ASAP1Q9ULH1 1129 aa21.49■■□□□ 1.03
LDLRAD3-205ENST00000532490 ERVV-2B6SEH9 535 aa21.48■■□□□ 1.03
LDLRAD3-205ENST00000532490 HMGB2P26583 209 aaKnown RBP21.48■■□□□ 1.03
LDLRAD3-205ENST00000532490 DCAF5Q96JK2 942 aa21.48■■□□□ 1.03
LDLRAD3-205ENST00000532490 KDM6AO15550 1401 aaPredicted RBP21.47■■□□□ 1.03
LDLRAD3-205ENST00000532490 C4BP0C0L5 1744 aa21.47■■□□□ 1.03
LDLRAD3-205ENST00000532490 LOC102724428A0A0B4J2F2 783 aa21.47■■□□□ 1.03
LDLRAD3-205ENST00000532490 HSP90AB1P08238 724 aaKnown RBP21.47■■□□□ 1.03
LDLRAD3-205ENST00000532490 SIK1P57059 783 aa21.47■■□□□ 1.03
LDLRAD3-205ENST00000532490 ZNF530Q6P9A1 599 aaPredicted RBP21.47■■□□□ 1.03
LDLRAD3-205ENST00000532490 ATG3Q9NT62 314 aa21.47■■□□□ 1.03
LDLRAD3-205ENST00000532490 MAP3K5Q99683 1374 aa21.46■■□□□ 1.03
LDLRAD3-205ENST00000532490 AMIGO3Q86WK7 504 aa21.44■■□□□ 1.02
LDLRAD3-205ENST00000532490 LINC00116Q8NCU8 138 aa21.44■■□□□ 1.02
LDLRAD3-205ENST00000532490 ITPK1Q13572 414 aa21.43■■□□□ 1.02
LDLRAD3-205ENST00000532490 UBR3Q6ZT12 1888 aa21.43■■□□□ 1.02
LDLRAD3-205ENST00000532490 DIAPH1O60610 1272 aaKnown RBP21.42■■□□□ 1.02
LDLRAD3-205ENST00000532490 COL3A1P02461 1466 aaPredicted RBP21.42■■□□□ 1.02
LDLRAD3-205ENST00000532490 POLD1P28340 1107 aa21.42■■□□□ 1.02
LDLRAD3-205ENST00000532490 FLAD1Q8NFF5 587 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms