RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 DUSP27Q5VZP5 1158 aa28.8■■■□□ 2.2
PACSIN3-209ENST00000532457 TOM1L2Q6ZVM7 507 aa28.8■■■□□ 2.2
PACSIN3-209ENST00000532457 QTRT2Q9H974 415 aaKnown RBP28.8■■■□□ 2.2
PACSIN3-209ENST00000532457 CCDC9Q9Y3X0 531 aaKnown RBP28.8■■■□□ 2.2
PACSIN3-209ENST00000532457 WDR63Q8IWG1 891 aa28.79■■■□□ 2.2
PACSIN3-209ENST00000532457 LARP1Q6PKG0 1096 aaKnown RBP28.78■■■□□ 2.2
PACSIN3-209ENST00000532457 CRB1P82279 1406 aa28.77■■■□□ 2.2
PACSIN3-209ENST00000532457 MTHFSDQ2M296 383 aaKnown RBP28.76■■■□□ 2.19
PACSIN3-209ENST00000532457 FAM208AQ9UK61 1670 aaKnown RBP28.76■■■□□ 2.19
PACSIN3-209ENST00000532457 NLRP2Q9NX02 1062 aa28.76■■■□□ 2.19
PACSIN3-209ENST00000532457 SUPT16HQ9Y5B9 1047 aaKnown RBP28.76■■■□□ 2.19
PACSIN3-209ENST00000532457 ATRNO75882 1429 aa28.75■■■□□ 2.19
PACSIN3-209ENST00000532457 RGS17Q9UGC6 210 aaPredicted RBP28.75■■■□□ 2.19
PACSIN3-209ENST00000532457 NCAPD2Q15021 1401 aa28.74■■■□□ 2.19
PACSIN3-209ENST00000532457 CARD10Q9BWT7 1032 aa28.74■■■□□ 2.19
PACSIN3-209ENST00000532457 E9PSI1 815 aa28.73■■■□□ 2.19
PACSIN3-209ENST00000532457 GJD4Q96KN9 370 aaPredicted RBP28.73■■■□□ 2.19
PACSIN3-209ENST00000532457 SPATA31A5Q5VU36 1347 aa28.73■■■□□ 2.19
PACSIN3-209ENST00000532457 SPATA31A7Q8IWB4 1347 aa28.73■■■□□ 2.19
PACSIN3-209ENST00000532457 DLG5Q8TDM6 1919 aa28.73■■■□□ 2.19
PACSIN3-209ENST00000532457 THUMPD2Q9BTF0 503 aaKnown RBP28.73■■■□□ 2.19
PACSIN3-209ENST00000532457 SPATA31A1Q5TZJ5 1347 aa28.72■■■□□ 2.19
PACSIN3-209ENST00000532457 USP35Q9P2H5 1018 aa28.71■■■□□ 2.19
PACSIN3-209ENST00000532457 THRAP3Q9Y2W1 955 aaKnown RBP28.71■■■□□ 2.19
PACSIN3-209ENST00000532457 GTF3C3Q9Y5Q9 886 aa28.71■■■□□ 2.19
PACSIN3-209ENST00000532457 DCTN1Q14203 1278 aa28.7■■■□□ 2.18
PACSIN3-209ENST00000532457 RBM6P78332 1123 aaKnown RBP28.69■■■□□ 2.18
PACSIN3-209ENST00000532457 RXRBP28702 533 aa28.66■■■□□ 2.18
PACSIN3-209ENST00000532457 POTEAQ6S8J7 498 aa28.66■■■□□ 2.18
PACSIN3-209ENST00000532457 BARGINQ6ZT62 677 aa28.64■■■□□ 2.18
PACSIN3-209ENST00000532457 MCM10Q7L590 875 aa28.64■■■□□ 2.18
PACSIN3-209ENST00000532457 IL16Q14005 1332 aa28.64■■■□□ 2.18
PACSIN3-209ENST00000532457 GAS2L2Q8NHY3 880 aa28.64■■■□□ 2.17
PACSIN3-209ENST00000532457 TSR2Q969E8 191 aaKnown RBP28.63■■■□□ 2.17
PACSIN3-209ENST00000532457 CDCA7Q9BWT1 371 aaPredicted RBP28.62■■■□□ 2.17
PACSIN3-209ENST00000532457 RCAN3Q9UKA8 241 aa28.62■■■□□ 2.17
PACSIN3-209ENST00000532457 GLI3P10071 1580 aa28.62■■■□□ 2.17
PACSIN3-209ENST00000532457 LMOD3Q0VAK6 560 aa28.62■■■□□ 2.17
PACSIN3-209ENST00000532457 FAM98CQ17RN3 349 aaKnown RBP28.61■■■□□ 2.17
PACSIN3-209ENST00000532457 RAPGEF4Q8WZA2 1011 aa28.59■■■□□ 2.17
PACSIN3-209ENST00000532457 ONECUT3O60422 494 aaPredicted RBP28.59■■■□□ 2.17
PACSIN3-209ENST00000532457 ZNF853P0CG23 659 aa28.59■■■□□ 2.17
PACSIN3-209ENST00000532457 IL2RBP14784 551 aa28.59■■■□□ 2.17
PACSIN3-209ENST00000532457 FANCIQ9NVI1 1328 aa28.58■■■□□ 2.17
PACSIN3-209ENST00000532457 MYH16Q9H6N6 1097 aa28.58■■■□□ 2.17
PACSIN3-209ENST00000532457 A0A0G2JS52 829 aa28.57■■■□□ 2.16
PACSIN3-209ENST00000532457 MYT1Q01538 1121 aa28.57■■■□□ 2.16
PACSIN3-209ENST00000532457 PLEKHO1Q53GL0 409 aaPredicted RBP28.57■■■□□ 2.16
PACSIN3-209ENST00000532457 LAS1LQ9Y4W2 734 aaKnown RBP28.57■■■□□ 2.16
PACSIN3-209ENST00000532457 GNAT3A8MTJ3 354 aa28.57■■■□□ 2.16
PACSIN3-209ENST00000532457 IL17REQ8NFR9 667 aa28.57■■■□□ 2.16
PACSIN3-209ENST00000532457 RNF123Q5XPI4 1314 aa28.56■■■□□ 2.16
PACSIN3-209ENST00000532457 MEGF6O75095 1541 aa28.55■■■□□ 2.16
PACSIN3-209ENST00000532457 TATP17735 454 aaPredicted RBP28.55■■■□□ 2.16
PACSIN3-209ENST00000532457 AMOTQ4VCS5 1084 aa28.55■■■□□ 2.16
PACSIN3-209ENST00000532457 HTATSF1O43719 755 aaKnown RBP28.54■■■□□ 2.16
PACSIN3-209ENST00000532457 IFT57Q9NWB7 429 aa28.54■■■□□ 2.16
PACSIN3-209ENST00000532457 MAP3K5Q99683 1374 aa28.54■■■□□ 2.16
PACSIN3-209ENST00000532457 CALD1Q05682 793 aaKnown RBP28.53■■■□□ 2.16
PACSIN3-209ENST00000532457 ZNF530Q6P9A1 599 aaPredicted RBP28.53■■■□□ 2.16
PACSIN3-209ENST00000532457 RTF1Q92541 710 aaKnown RBP28.53■■■□□ 2.16
PACSIN3-209ENST00000532457 DISP2A7MBM2 1401 aa28.53■■■□□ 2.16
PACSIN3-209ENST00000532457 CFAP44Q96MT7 982 aa28.53■■■□□ 2.16
PACSIN3-209ENST00000532457 WNK3Q9BYP7 1800 aa28.52■■■□□ 2.16
PACSIN3-209ENST00000532457 IRX6P78412 446 aaPredicted RBP28.52■■■□□ 2.16
PACSIN3-209ENST00000532457 EXOSC9Q06265 439 aaKnown RBP28.52■■■□□ 2.16
PACSIN3-209ENST00000532457 SEPT12Q8IYM1 358 aa28.52■■■□□ 2.16
PACSIN3-209ENST00000532457 MBIPQ9NS73 344 aa28.52■■■□□ 2.16
PACSIN3-209ENST00000532457 PLEKHG2Q9H7P9 1386 aa28.52■■■□□ 2.16
PACSIN3-209ENST00000532457 GNAI1P63096 354 aa28.51■■■□□ 2.15
PACSIN3-209ENST00000532457 LGR6Q9HBX8 967 aa28.51■■■□□ 2.15
PACSIN3-209ENST00000532457 EXOC5O00471 708 aa28.5■■■□□ 2.15
PACSIN3-209ENST00000532457 DDB1Q16531 1140 aa28.5■■■□□ 2.15
PACSIN3-209ENST00000532457 AKAP4Q5JQC9 854 aa28.5■■■□□ 2.15
PACSIN3-209ENST00000532457 PARP4Q9UKK3 1724 aaKnown RBP28.49■■■□□ 2.15
PACSIN3-209ENST00000532457 CHL1O00533 1208 aa28.49■■■□□ 2.15
PACSIN3-209ENST00000532457 FKBP8Q14318 412 aa28.49■■■□□ 2.15
PACSIN3-209ENST00000532457 THSD7AQ9UPZ6 1657 aa28.49■■■□□ 2.15
PACSIN3-209ENST00000532457 MIS18AQ9NYP9 233 aa28.48■■■□□ 2.15
PACSIN3-209ENST00000532457 OVOS2A0A0G2JMS6 1433 aa28.48■■■□□ 2.15
PACSIN3-209ENST00000532457 MPRIPQ6WCQ1 1025 aa28.47■■■□□ 2.15
PACSIN3-209ENST00000532457 ZCRB1Q8TBF4 217 aaKnown RBP28.46■■■□□ 2.15
PACSIN3-209ENST00000532457 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.46■■■□□ 2.15
PACSIN3-209ENST00000532457 BCAR3O75815 825 aa28.46■■■□□ 2.15
PACSIN3-209ENST00000532457 SPG7Q9UQ90 795 aa28.46■■■□□ 2.15
PACSIN3-209ENST00000532457 RGS12O14924 1447 aa28.45■■■□□ 2.14
PACSIN3-209ENST00000532457 CEMIPQ8WUJ3 1361 aa28.45■■■□□ 2.14
PACSIN3-209ENST00000532457 PLIN1O60240 522 aa28.44■■■□□ 2.14
PACSIN3-209ENST00000532457 RRP1P56182 461 aaKnown RBP28.44■■■□□ 2.14
PACSIN3-209ENST00000532457 C1orf141Q5JVX7 400 aa28.43■■■□□ 2.14
PACSIN3-209ENST00000532457 TNS2Q63HR2 1409 aa28.43■■■□□ 2.14
PACSIN3-209ENST00000532457 CYP27B1O15528 508 aa28.43■■■□□ 2.14
PACSIN3-209ENST00000532457 TSPYL6Q8N831 410 aa28.43■■■□□ 2.14
PACSIN3-209ENST00000532457 RNMTO43148 476 aaKnown RBP28.42■■■□□ 2.14
PACSIN3-209ENST00000532457 RARSP54136 660 aaKnown RBP28.42■■■□□ 2.14
PACSIN3-209ENST00000532457 LRRC37A3O60309 1634 aa28.42■■■□□ 2.14
PACSIN3-209ENST00000532457 PHKG2P15735 406 aa28.41■■■□□ 2.14
PACSIN3-209ENST00000532457 C8orf58Q8NAV2 365 aa28.41■■■□□ 2.14
PACSIN3-209ENST00000532457 NEFLP07196 543 aa28.41■■■□□ 2.14
PACSIN3-209ENST00000532457 KRT27Q7Z3Y8 459 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms