RNA–Protein interactions for RNA: ENST00000532446.5

PPP1CA-208, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 5

Gene PPP1CA, Length 1,465 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-208ENST00000532446 SENP3-EIF4A1A0A087X0R7 540 aa23.72■■□□□ 1.39
PPP1CA-208ENST00000532446 TMPOP42166 694 aaKnown RBP23.72■■□□□ 1.39
PPP1CA-208ENST00000532446 USP35Q9P2H5 1018 aa23.72■■□□□ 1.39
PPP1CA-208ENST00000532446 TATP17735 454 aaPredicted RBP23.7■■□□□ 1.38
PPP1CA-208ENST00000532446 NFE2L2Q16236 605 aa23.7■■□□□ 1.38
PPP1CA-208ENST00000532446 THRAP3Q9Y2W1 955 aaKnown RBP23.7■■□□□ 1.38
PPP1CA-208ENST00000532446 PKD1L3Q7Z443 1732 aa23.7■■□□□ 1.38
PPP1CA-208ENST00000532446 IL2RBP14784 551 aa23.69■■□□□ 1.38
PPP1CA-208ENST00000532446 RBM6P78332 1123 aaKnown RBP23.69■■□□□ 1.38
PPP1CA-208ENST00000532446 MTHFSDQ2M296 383 aaKnown RBP23.69■■□□□ 1.38
PPP1CA-208ENST00000532446 NCBP3Q53F19 620 aaKnown RBP23.69■■□□□ 1.38
PPP1CA-208ENST00000532446 NGEFQ8N5V2 710 aa23.69■■□□□ 1.38
PPP1CA-208ENST00000532446 RRP7AQ9Y3A4 280 aaKnown RBP23.69■■□□□ 1.38
PPP1CA-208ENST00000532446 OVOS2A0A0G2JMS6 1433 aa23.69■■□□□ 1.38
PPP1CA-208ENST00000532446 DISP2A7MBM2 1401 aa23.69■■□□□ 1.38
PPP1CA-208ENST00000532446 CCDC9Q9Y3X0 531 aaKnown RBP23.68■■□□□ 1.38
PPP1CA-208ENST00000532446 ATRNO75882 1429 aa23.68■■□□□ 1.38
PPP1CA-208ENST00000532446 AMOTQ4VCS5 1084 aa23.68■■□□□ 1.38
PPP1CA-208ENST00000532446 PLEKHO1Q53GL0 409 aaPredicted RBP23.68■■□□□ 1.38
PPP1CA-208ENST00000532446 GAS2L2Q8NHY3 880 aa23.68■■□□□ 1.38
PPP1CA-208ENST00000532446 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.68■■□□□ 1.38
PPP1CA-208ENST00000532446 NEUROD2Q15784 382 aa23.67■■□□□ 1.38
PPP1CA-208ENST00000532446 RIPK4P57078 832 aa23.66■■□□□ 1.38
PPP1CA-208ENST00000532446 BARGINQ6ZT62 677 aa23.66■■□□□ 1.38
PPP1CA-208ENST00000532446 TRPC5Q9UL62 973 aaPredicted RBP23.66■■□□□ 1.38
PPP1CA-208ENST00000532446 SALL2Q9Y467 1007 aaPredicted RBP23.66■■□□□ 1.38
PPP1CA-208ENST00000532446 ZBED9Q6R2W3 1325 aa23.66■■□□□ 1.38
PPP1CA-208ENST00000532446 CCDC27Q2M243 656 aa23.64■■□□□ 1.38
PPP1CA-208ENST00000532446 CDCA7Q9BWT1 371 aaPredicted RBP23.64■■□□□ 1.38
PPP1CA-208ENST00000532446 GLI3P10071 1580 aa23.64■■□□□ 1.37
PPP1CA-208ENST00000532446 SHANK3Q9BYB0 1731 aa23.63■■□□□ 1.37
PPP1CA-208ENST00000532446 TRIM35Q9UPQ4 493 aa23.63■■□□□ 1.37
PPP1CA-208ENST00000532446 SPG7Q9UQ90 795 aa23.63■■□□□ 1.37
PPP1CA-208ENST00000532446 GJD4Q96KN9 370 aaPredicted RBP23.62■■□□□ 1.37
PPP1CA-208ENST00000532446 ZNF521Q96K83 1311 aa23.62■■□□□ 1.37
PPP1CA-208ENST00000532446 RGS12O14924 1447 aa23.62■■□□□ 1.37
PPP1CA-208ENST00000532446 ZNF530Q6P9A1 599 aaPredicted RBP23.62■■□□□ 1.37
PPP1CA-208ENST00000532446 ZCRB1Q8TBF4 217 aaKnown RBP23.62■■□□□ 1.37
PPP1CA-208ENST00000532446 WWC1Q8IX03 1113 aa23.61■■□□□ 1.37
PPP1CA-208ENST00000532446 LMOD3Q0VAK6 560 aa23.6■■□□□ 1.37
PPP1CA-208ENST00000532446 MAP3K5Q99683 1374 aa23.6■■□□□ 1.37
PPP1CA-208ENST00000532446 GNAT3A8MTJ3 354 aa23.59■■□□□ 1.37
PPP1CA-208ENST00000532446 FAM98CQ17RN3 349 aaKnown RBP23.59■■□□□ 1.37
PPP1CA-208ENST00000532446 AKAP4Q5JQC9 854 aa23.59■■□□□ 1.37
PPP1CA-208ENST00000532446 VIRMAQ69YN4 1812 aaKnown RBP23.59■■□□□ 1.37
PPP1CA-208ENST00000532446 HTATSF1O43719 755 aaKnown RBP23.58■■□□□ 1.37
PPP1CA-208ENST00000532446 THSD7AQ9UPZ6 1657 aa23.58■■□□□ 1.36
PPP1CA-208ENST00000532446 LRRC37A3O60309 1634 aa23.58■■□□□ 1.36
PPP1CA-208ENST00000532446 TNS2Q63HR2 1409 aa23.57■■□□□ 1.36
PPP1CA-208ENST00000532446 PCDH11XQ9BZA7 1347 aa23.57■■□□□ 1.36
PPP1CA-208ENST00000532446 PCDH11YQ9BZA8 1340 aa23.57■■□□□ 1.36
PPP1CA-208ENST00000532446 CYP27B1O15528 508 aa23.57■■□□□ 1.36
PPP1CA-208ENST00000532446 C1orf141Q5JVX7 400 aa23.57■■□□□ 1.36
PPP1CA-208ENST00000532446 UPF1Q92900 1129 aaKnown RBP eCLIP23.57■■□□□ 1.364e-7■■■■■ 28.3
PPP1CA-208ENST00000532446 PHKG2P15735 406 aa23.56■■□□□ 1.36
PPP1CA-208ENST00000532446 IFNL2Q8IZJ0 200 aa23.56■■□□□ 1.36
PPP1CA-208ENST00000532446 ADAMTS7Q9UKP4 1686 aa23.55■■□□□ 1.36
PPP1CA-208ENST00000532446 EXOC5O00471 708 aa23.55■■□□□ 1.36
PPP1CA-208ENST00000532446 ONECUT3O60422 494 aaPredicted RBP23.55■■□□□ 1.36
PPP1CA-208ENST00000532446 WDR63Q8IWG1 891 aa23.55■■□□□ 1.36
PPP1CA-208ENST00000532446 RTF1Q92541 710 aaKnown RBP23.55■■□□□ 1.36
PPP1CA-208ENST00000532446 DCTN1Q14203 1278 aa23.54■■□□□ 1.36
PPP1CA-208ENST00000532446 SCN11AQ9UI33 1791 aa23.53■■□□□ 1.36
PPP1CA-208ENST00000532446 DDB1Q16531 1140 aa23.53■■□□□ 1.36
PPP1CA-208ENST00000532446 MCM10Q7L590 875 aa23.53■■□□□ 1.36
PPP1CA-208ENST00000532446 IL17REQ8NFR9 667 aa23.52■■□□□ 1.36
PPP1CA-208ENST00000532446 THUMPD2Q9BTF0 503 aaKnown RBP23.52■■□□□ 1.36
PPP1CA-208ENST00000532446 CEMIPQ8WUJ3 1361 aa23.52■■□□□ 1.36
PPP1CA-208ENST00000532446 GOLGA2Q08379 1002 aa23.51■■□□□ 1.35
PPP1CA-208ENST00000532446 PDE3BQ13370 1112 aa23.51■■□□□ 1.35
PPP1CA-208ENST00000532446 DDX54Q8TDD1 881 aaKnown RBP23.51■■□□□ 1.35
PPP1CA-208ENST00000532446 HSP90AB1P08238 724 aaKnown RBP23.5■■□□□ 1.35
PPP1CA-208ENST00000532446 NKX1-1Q15270 411 aaPredicted RBP23.5■■□□□ 1.35
PPP1CA-208ENST00000532446 MPRIPQ6WCQ1 1025 aa23.5■■□□□ 1.35
PPP1CA-208ENST00000532446 KDM6AO15550 1401 aaPredicted RBP23.5■■□□□ 1.35
PPP1CA-208ENST00000532446 RNMTO43148 476 aaKnown RBP23.49■■□□□ 1.35
PPP1CA-208ENST00000532446 LGR6Q9HBX8 967 aa23.49■■□□□ 1.35
PPP1CA-208ENST00000532446 IL16Q14005 1332 aa23.49■■□□□ 1.35
PPP1CA-208ENST00000532446 CALD1Q05682 793 aaKnown RBP23.49■■□□□ 1.35
PPP1CA-208ENST00000532446 DCAF5Q96JK2 942 aa23.49■■□□□ 1.35
PPP1CA-208ENST00000532446 CDCA7LQ96GN5 454 aa23.48■■□□□ 1.35
PPP1CA-208ENST00000532446 SPINK5Q9NQ38 1064 aaPredicted RBP23.48■■□□□ 1.35
PPP1CA-208ENST00000532446 A0A0G2JS52 829 aa23.47■■□□□ 1.35
PPP1CA-208ENST00000532446 MYT1Q01538 1121 aa23.47■■□□□ 1.35
PPP1CA-208ENST00000532446 SLFN5Q08AF3 891 aa23.46■■□□□ 1.35
PPP1CA-208ENST00000532446 SEPT12Q8IYM1 358 aa23.46■■□□□ 1.35
PPP1CA-208ENST00000532446 SIPA1L3O60292 1781 aaPredicted RBP23.46■■□□□ 1.35
PPP1CA-208ENST00000532446 E9PSI1 815 aa23.45■■□□□ 1.34
PPP1CA-208ENST00000532446 MARCH10Q8NA82 808 aaPredicted RBP23.45■■□□□ 1.34
PPP1CA-208ENST00000532446 TOGARAM1Q9Y4F4 1720 aa23.45■■□□□ 1.34
PPP1CA-208ENST00000532446 TRMT2AQ8IZ69 625 aaKnown RBP23.44■■□□□ 1.34
PPP1CA-208ENST00000532446 MRC1P22897 1456 aa23.44■■□□□ 1.34
PPP1CA-208ENST00000532446 ZNF853P0CG23 659 aa23.43■■□□□ 1.34
PPP1CA-208ENST00000532446 IFT57Q9NWB7 429 aa23.43■■□□□ 1.34
PPP1CA-208ENST00000532446 BRWD3Q6RI45 1802 aa23.43■■□□□ 1.34
PPP1CA-208ENST00000532446 GNAI1P63096 354 aa23.43■■□□□ 1.34
PPP1CA-208ENST00000532446 CFAP44Q96MT7 982 aa23.43■■□□□ 1.34
PPP1CA-208ENST00000532446 TEFQ10587 303 aa23.42■■□□□ 1.34
PPP1CA-208ENST00000532446 ERVV-2B6SEH9 535 aa23.41■■□□□ 1.34
PPP1CA-208ENST00000532446 TAF7Q15545 349 aaPredicted RBP23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms