RNA–Protein interactions for RNA: ENST00000532074.5

SSR2-218, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 5

Gene SSR2, Length 1,008 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-218ENST00000532074 PRKRIP1Q9H875 184 aaPredicted RBP13.96□□□□□ -0.17
SSR2-218ENST00000532074 NCAPD2Q15021 1401 aa13.96□□□□□ -0.18
SSR2-218ENST00000532074 TNS2Q63HR2 1409 aa13.96□□□□□ -0.18
SSR2-218ENST00000532074 U2SURPO15042 1029 aaKnown RBP13.95□□□□□ -0.18
SSR2-218ENST00000532074 ANP32CO43423 234 aa13.95□□□□□ -0.18
SSR2-218ENST00000532074 PLEKHO1Q53GL0 409 aaPredicted RBP13.95□□□□□ -0.18
SSR2-218ENST00000532074 DDX54Q8TDD1 881 aaKnown RBP13.95□□□□□ -0.18
SSR2-218ENST00000532074 PCDH11XQ9BZA7 1347 aa13.94□□□□□ -0.18
SSR2-218ENST00000532074 PCDH11YQ9BZA8 1340 aa13.94□□□□□ -0.18
SSR2-218ENST00000532074 BCL9O00512 1426 aa13.94□□□□□ -0.18
SSR2-218ENST00000532074 MARCH10Q8NA82 808 aaPredicted RBP13.94□□□□□ -0.18
SSR2-218ENST00000532074 PNNQ9H307 717 aaKnown RBP13.94□□□□□ -0.18
SSR2-218ENST00000532074 KDRP35968 1356 aa13.93□□□□□ -0.18
SSR2-218ENST00000532074 LRRC37A3O60309 1634 aa13.93□□□□□ -0.18
SSR2-218ENST00000532074 HSP90AB1P08238 724 aaKnown RBP13.92□□□□□ -0.18
SSR2-218ENST00000532074 FAM182BQ5T319 152 aa13.92□□□□□ -0.18
SSR2-218ENST00000532074 IFNL2Q8IZJ0 200 aa13.92□□□□□ -0.18
SSR2-218ENST00000532074 MEGF6O75095 1541 aa13.91□□□□□ -0.18
SSR2-218ENST00000532074 FCHSD2O94868 740 aa13.91□□□□□ -0.18
SSR2-218ENST00000532074 NEFMP07197 916 aa13.91□□□□□ -0.18
SSR2-218ENST00000532074 U2AF1L5P0DN76 240 aaPredicted RBP13.91□□□□□ -0.18
SSR2-218ENST00000532074 BAG6P46379 1132 aa13.91□□□□□ -0.18
SSR2-218ENST00000532074 U2AF1Q01081 240 aaKnown RBP eCLIP13.91□□□□□ -0.18
SSR2-218ENST00000532074 BCL11BQ9C0K0 894 aaPredicted RBP13.91□□□□□ -0.18
SSR2-218ENST00000532074 TRIM37O94972 964 aa13.9□□□□□ -0.18
SSR2-218ENST00000532074 HMOX1P09601 288 aa13.9□□□□□ -0.18
SSR2-218ENST00000532074 KAT6BQ8WYB5 2073 aa13.9□□□□□ -0.18
SSR2-218ENST00000532074 COL3A1P02461 1466 aaPredicted RBP13.89□□□□□ -0.19
SSR2-218ENST00000532074 C1orf141Q5JVX7 400 aa13.89□□□□□ -0.19
SSR2-218ENST00000532074 AEBP1Q8IUX7 1158 aa13.89□□□□□ -0.19
SSR2-218ENST00000532074 RGPD1P0DJD0 1748 aa13.89□□□□□ -0.19
SSR2-218ENST00000532074 NKX1-1Q15270 411 aaPredicted RBP13.88□□□□□ -0.19
SSR2-218ENST00000532074 CYP27B1O15528 508 aa13.87□□□□□ -0.19
SSR2-218ENST00000532074 APBA3O96018 575 aa13.87□□□□□ -0.19
SSR2-218ENST00000532074 HMGB2P26583 209 aaKnown RBP13.87□□□□□ -0.19
SSR2-218ENST00000532074 PHKG2P15735 406 aa13.86□□□□□ -0.19
SSR2-218ENST00000532074 WDR43Q15061 677 aaKnown RBP eCLIP13.86□□□□□ -0.19
SSR2-218ENST00000532074 AKAP4Q5JQC9 854 aa13.86□□□□□ -0.19
SSR2-218ENST00000532074 ZNF530Q6P9A1 599 aaPredicted RBP13.86□□□□□ -0.19
SSR2-218ENST00000532074 GAS2L2Q8NHY3 880 aa13.86□□□□□ -0.19
SSR2-218ENST00000532074 PKD1L3Q7Z443 1732 aa13.86□□□□□ -0.19
SSR2-218ENST00000532074 PLSCR1O15162 318 aa13.85□□□□□ -0.19
SSR2-218ENST00000532074 SYTL4Q96C24 671 aaPredicted RBP13.85□□□□□ -0.19
SSR2-218ENST00000532074 ACSBG1Q96GR2 724 aa13.85□□□□□ -0.19
SSR2-218ENST00000532074 DCAF5Q96JK2 942 aa13.85□□□□□ -0.19
SSR2-218ENST00000532074 RSPH6AQ9H0K4 717 aa13.85□□□□□ -0.19
SSR2-218ENST00000532074 ERVV-2B6SEH9 535 aa13.84□□□□□ -0.19
SSR2-218ENST00000532074 PRKAR2BP31323 418 aa13.84□□□□□ -0.19
SSR2-218ENST00000532074 PRIM1P49642 420 aaKnown RBP13.84□□□□□ -0.19
SSR2-218ENST00000532074 SBF2Q86WG5 1849 aa13.84□□□□□ -0.19
SSR2-218ENST00000532074 SHANK3Q9BYB0 1731 aa13.82□□□□□ -0.2
SSR2-218ENST00000532074 KCNQ2O43526 872 aa13.82□□□□□ -0.2
SSR2-218ENST00000532074 MTHFSDQ2M296 383 aaKnown RBP13.82□□□□□ -0.2
SSR2-218ENST00000532074 EP400Q96L91 3159 aa13.82□□□□□ -0.2
SSR2-218ENST00000532074 MAPK8IP3Q9UPT6 1336 aa13.82□□□□□ -0.2
SSR2-218ENST00000532074 GNAT3A8MTJ3 354 aa13.81□□□□□ -0.2
SSR2-218ENST00000532074 EN1Q05925 392 aaPredicted RBP13.81□□□□□ -0.2
SSR2-218ENST00000532074 MPRIPQ6WCQ1 1025 aa13.81□□□□□ -0.2
SSR2-218ENST00000532074 SMARCC1Q92922 1105 aaPredicted RBP13.81□□□□□ -0.2
SSR2-218ENST00000532074 TMOD3Q9NYL9 352 aa13.81□□□□□ -0.2
SSR2-218ENST00000532074 NHSQ6T4R5 1651 aa13.8□□□□□ -0.2
SSR2-218ENST00000532074 HTATSF1O43719 755 aaKnown RBP13.8□□□□□ -0.2
SSR2-218ENST00000532074 CABP4P57796 275 aa13.8□□□□□ -0.2
SSR2-218ENST00000532074 DEFB132Q7Z7B7 95 aa13.8□□□□□ -0.2
SSR2-218ENST00000532074 RTF1Q92541 710 aaKnown RBP13.8□□□□□ -0.2
SSR2-218ENST00000532074 CAMKK2Q96RR4 588 aa13.8□□□□□ -0.2
SSR2-218ENST00000532074 PHACTR3Q96KR7 559 aa13.79□□□□□ -0.2
SSR2-218ENST00000532074 MRS2Q9HD23 443 aa13.79□□□□□ -0.2
SSR2-218ENST00000532074 EZH2Q15910 746 aaKnown RBP13.78□□□□□ -0.2
SSR2-218ENST00000532074 NBPF14Q5TI25 921 aa13.78□□□□□ -0.2
SSR2-218ENST00000532074 TNS1Q9HBL0 1735 aaKnown RBP13.78□□□□□ -0.2
SSR2-218ENST00000532074 RNMTO43148 476 aaKnown RBP13.77□□□□□ -0.21
SSR2-218ENST00000532074 KCNA4P22459 653 aa13.77□□□□□ -0.21
SSR2-218ENST00000532074 SLC27A3Q5K4L6 730 aa13.77□□□□□ -0.21
SSR2-218ENST00000532074 DIEXFQ68CQ4 756 aaKnown RBP13.77□□□□□ -0.21
SSR2-218ENST00000532074 RUNDC1Q96C34 613 aa13.77□□□□□ -0.21
SSR2-218ENST00000532074 PLEKHF1Q96S99 279 aa13.77□□□□□ -0.21
SSR2-218ENST00000532074 MAP3K5Q99683 1374 aa13.77□□□□□ -0.21
SSR2-218ENST00000532074 ADAMTS8Q9UP79 889 aa13.77□□□□□ -0.21
SSR2-218ENST00000532074 DOT1LQ8TEK3 1739 aa13.76□□□□□ -0.21
SSR2-218ENST00000532074 TEFQ10587 303 aa13.76□□□□□ -0.21
SSR2-218ENST00000532074 PTF1AQ7RTS3 328 aa13.76□□□□□ -0.21
SSR2-218ENST00000532074 PIGBQ92521 554 aa13.76□□□□□ -0.21
SSR2-218ENST00000532074 RGPD3A6NKT7 1758 aaPredicted RBP13.76□□□□□ -0.21
SSR2-218ENST00000532074 RGPD4Q7Z3J3 1758 aa13.76□□□□□ -0.21
SSR2-218ENST00000532074 LMOD3Q0VAK6 560 aa13.75□□□□□ -0.21
SSR2-218ENST00000532074 NFE2L2Q16236 605 aa13.75□□□□□ -0.21
SSR2-218ENST00000532074 TXNRD1Q16881 649 aa13.75□□□□□ -0.21
SSR2-218ENST00000532074 NFATC2IPQ8NCF5 419 aa13.75□□□□□ -0.21
SSR2-218ENST00000532074 SLC52A2Q9HAB3 445 aa13.75□□□□□ -0.21
SSR2-218ENST00000532074 BTAF1O14981 1849 aa13.75□□□□□ -0.21
SSR2-218ENST00000532074 ITGB4P16144 1822 aa13.74□□□□□ -0.21
SSR2-218ENST00000532074 PNISRQ8TF01 805 aaKnown RBP13.74□□□□□ -0.21
SSR2-218ENST00000532074 LGR6Q9HBX8 967 aa13.74□□□□□ -0.21
SSR2-218ENST00000532074 IL17REQ8NFR9 667 aa13.73□□□□□ -0.21
SSR2-218ENST00000532074 SCN11AQ9UI33 1791 aa13.73□□□□□ -0.21
SSR2-218ENST00000532074 KDM6AO15550 1401 aaPredicted RBP13.73□□□□□ -0.21
SSR2-218ENST00000532074 CCER2I3L3R5 266 aa13.72□□□□□ -0.21
SSR2-218ENST00000532074 TMPOP42166 694 aaKnown RBP13.72□□□□□ -0.21
SSR2-218ENST00000532074 RIPK4P57078 832 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms