RNA–Protein interactions for RNA: ENST00000531942.1

SCRIB-207, Transcript of scribbled planar cell polarity protein, humanhuman

TSL 2

Gene SCRIB, Length 421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRIB-207ENST00000531942 USHBP1Q8N6Y0 703 aa30.45■■■□□ 2.47
SCRIB-207ENST00000531942 SMG6Q86US8 1419 aaKnown RBP30.45■■■□□ 2.46
SCRIB-207ENST00000531942 PRIM1P49642 420 aaKnown RBP30.44■■■□□ 2.46
SCRIB-207ENST00000531942 YY1P25490 414 aa30.43■■■□□ 2.46
SCRIB-207ENST00000531942 TIMELESSQ9UNS1 1208 aa30.43■■■□□ 2.46
SCRIB-207ENST00000531942 SLC27A3Q5K4L6 730 aa30.42■■■□□ 2.46
SCRIB-207ENST00000531942 CARD14Q9BXL6 1004 aa30.42■■■□□ 2.46
SCRIB-207ENST00000531942 HSP90AB2PQ58FF8 381 aa30.41■■■□□ 2.46
SCRIB-207ENST00000531942 INSRP06213 1382 aa30.41■■■□□ 2.46
SCRIB-207ENST00000531942 RAPGEF4Q8WZA2 1011 aa30.4■■■□□ 2.46
SCRIB-207ENST00000531942 SGIP1Q9BQI5 828 aa30.4■■■□□ 2.46
SCRIB-207ENST00000531942 NSD3Q9BZ95 1437 aa30.39■■■□□ 2.46
SCRIB-207ENST00000531942 FHDC1Q9C0D6 1143 aaPredicted RBP30.39■■■□□ 2.46
SCRIB-207ENST00000531942 CGNL1Q0VF96 1302 aa30.39■■■□□ 2.46
SCRIB-207ENST00000531942 NSD2O96028 1365 aa30.39■■■□□ 2.45
SCRIB-207ENST00000531942 FLT4P35916 1363 aa30.39■■■□□ 2.45
SCRIB-207ENST00000531942 AKT1S1Q96B36 256 aa30.38■■■□□ 2.45
SCRIB-207ENST00000531942 PCGF6Q9BYE7 350 aa30.38■■■□□ 2.45
SCRIB-207ENST00000531942 KCNQ4P56696 695 aa30.37■■■□□ 2.45
SCRIB-207ENST00000531942 TATP17735 454 aaPredicted RBP30.36■■■□□ 2.45
SCRIB-207ENST00000531942 KIF24Q5T7B8 1368 aa30.36■■■□□ 2.45
SCRIB-207ENST00000531942 SYT17Q9BSW7 474 aa30.35■■■□□ 2.45
SCRIB-207ENST00000531942 CLSPNQ9HAW4 1339 aa30.35■■■□□ 2.45
SCRIB-207ENST00000531942 LY75O60449 1722 aa30.34■■■□□ 2.45
SCRIB-207ENST00000531942 EMILIN1Q9Y6C2 1016 aa30.34■■■□□ 2.45
SCRIB-207ENST00000531942 ARXQ96QS3 562 aa30.33■■■□□ 2.45
SCRIB-207ENST00000531942 QSER1Q2KHR3 1735 aa30.33■■■□□ 2.45
SCRIB-207ENST00000531942 TFCP2L1Q9NZI6 479 aa30.31■■■□□ 2.44
SCRIB-207ENST00000531942 PNPLA7Q6ZV29 1317 aa30.3■■■□□ 2.44
SCRIB-207ENST00000531942 TUBGCP6Q96RT7 1819 aa30.3■■■□□ 2.44
SCRIB-207ENST00000531942 PCDH11XQ9BZA7 1347 aa30.29■■■□□ 2.44
SCRIB-207ENST00000531942 PCDH11YQ9BZA8 1340 aa30.29■■■□□ 2.44
SCRIB-207ENST00000531942 CCNL1Q9UK58 526 aaPredicted RBP30.29■■■□□ 2.44
SCRIB-207ENST00000531942 PPM1GO15355 546 aaPredicted RBP30.28■■■□□ 2.44
SCRIB-207ENST00000531942 SLC16A10Q8TF71 515 aa30.28■■■□□ 2.44
SCRIB-207ENST00000531942 UTRNP46939 3433 aa30.26■■■□□ 2.43
SCRIB-207ENST00000531942 POLR3GLQ9BT43 218 aa30.26■■■□□ 2.43
SCRIB-207ENST00000531942 ANKRD26Q9UPS8 1709 aa30.25■■■□□ 2.43
SCRIB-207ENST00000531942 CYP27B1O15528 508 aa30.23■■■□□ 2.43
SCRIB-207ENST00000531942 MAP3K5Q99683 1374 aa30.23■■■□□ 2.43
SCRIB-207ENST00000531942 POLD1P28340 1107 aa30.21■■■□□ 2.43
SCRIB-207ENST00000531942 MAP2P11137 1827 aaKnown RBP30.21■■■□□ 2.43
SCRIB-207ENST00000531942 PKD1L3Q7Z443 1732 aa30.21■■■□□ 2.43
SCRIB-207ENST00000531942 WASHC2AQ641Q2 1341 aa30.21■■■□□ 2.43
SCRIB-207ENST00000531942 COL24A1Q17RW2 1714 aa30.2■■■□□ 2.43
SCRIB-207ENST00000531942 MPRIPQ6WCQ1 1025 aa30.2■■■□□ 2.43
SCRIB-207ENST00000531942 NCAPD2Q15021 1401 aa30.2■■■□□ 2.42
SCRIB-207ENST00000531942 KLHL34Q8N239 644 aa30.18■■■□□ 2.42
SCRIB-207ENST00000531942 TOGARAM1Q9Y4F4 1720 aa30.18■■■□□ 2.42
SCRIB-207ENST00000531942 MSH5O43196 834 aa30.17■■■□□ 2.42
SCRIB-207ENST00000531942 POLKQ9UBT6 870 aa30.17■■■□□ 2.42
SCRIB-207ENST00000531942 C5P01031 1676 aa30.17■■■□□ 2.42
SCRIB-207ENST00000531942 PALLDQ8WX93 1383 aa30.16■■■□□ 2.42
SCRIB-207ENST00000531942 EIF4G2P78344 907 aaKnown RBP eCLIP30.16■■■□□ 2.42
SCRIB-207ENST00000531942 EYA1Q99502 592 aa30.16■■■□□ 2.42
SCRIB-207ENST00000531942 ITGB4P16144 1822 aa30.15■■■□□ 2.42
SCRIB-207ENST00000531942 HSPA5P11021 654 aaKnown RBP30.14■■■□□ 2.42
SCRIB-207ENST00000531942 TNNT2P45379 298 aaPredicted RBP30.14■■■□□ 2.42
SCRIB-207ENST00000531942 COL23A1Q86Y22 540 aaPredicted RBP30.14■■■□□ 2.42
SCRIB-207ENST00000531942 SPG7Q9UQ90 795 aa30.14■■■□□ 2.42
SCRIB-207ENST00000531942 TAF1LQ8IZX4 1826 aa30.11■■■□□ 2.41
SCRIB-207ENST00000531942 NKX1-1Q15270 411 aaPredicted RBP30.1■■■□□ 2.41
SCRIB-207ENST00000531942 PIGBQ92521 554 aa30.1■■■□□ 2.41
SCRIB-207ENST00000531942 SMARCC1Q92922 1105 aaPredicted RBP30.1■■■□□ 2.41
SCRIB-207ENST00000531942 CHD4Q14839 1912 aa30.09■■■□□ 2.41
SCRIB-207ENST00000531942 GPR162Q16538 588 aa30.09■■■□□ 2.41
SCRIB-207ENST00000531942 HMGB2P26583 209 aaKnown RBP30.08■■■□□ 2.41
SCRIB-207ENST00000531942 EIF4A2Q14240 407 aaKnown RBP30.08■■■□□ 2.41
SCRIB-207ENST00000531942 CCER1Q8TC90 406 aaPredicted RBP30.08■■■□□ 2.41
SCRIB-207ENST00000531942 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.08■■■□□ 2.411e-6■■■□□ 16.8
SCRIB-207ENST00000531942 MSL1Q68DK7 614 aa30.07■■■□□ 2.4
SCRIB-207ENST00000531942 PANK3Q9H999 370 aa30.07■■■□□ 2.4
SCRIB-207ENST00000531942 ZNF784Q8NCA9 323 aaPredicted RBP30.06■■■□□ 2.4
SCRIB-207ENST00000531942 NLGN2Q8NFZ4 835 aa30.06■■■□□ 2.4
SCRIB-207ENST00000531942 GOLGB1Q14789 3259 aaKnown RBP30.06■■■□□ 2.4
SCRIB-207ENST00000531942 C4BP0C0L5 1744 aa30.05■■■□□ 2.4
SCRIB-207ENST00000531942 PELP1Q8IZL8 1130 aaKnown RBP30.04■■■□□ 2.4
SCRIB-207ENST00000531942 FLAD1Q8NFF5 587 aa30.04■■■□□ 2.4
SCRIB-207ENST00000531942 PHKG2P15735 406 aa30.03■■■□□ 2.4
SCRIB-207ENST00000531942 IFNL2Q8IZJ0 200 aa30.03■■■□□ 2.4
SCRIB-207ENST00000531942 AK7Q96M32 723 aa30.02■■■□□ 2.4
SCRIB-207ENST00000531942 TMOD3Q9NYL9 352 aa30.02■■■□□ 2.4
SCRIB-207ENST00000531942 IGSF1Q8N6C5 1336 aa29.98■■■□□ 2.39
SCRIB-207ENST00000531942 LOC102724428A0A0B4J2F2 783 aa29.98■■■□□ 2.39
SCRIB-207ENST00000531942 SIK1P57059 783 aa29.98■■■□□ 2.39
SCRIB-207ENST00000531942 AMIGO3Q86WK7 504 aa29.98■■■□□ 2.39
SCRIB-207ENST00000531942 ASAP1Q9ULH1 1129 aa29.98■■■□□ 2.39
SCRIB-207ENST00000531942 UBR3Q6ZT12 1888 aa29.97■■■□□ 2.39
SCRIB-207ENST00000531942 PLEKHG2Q9H7P9 1386 aa29.96■■■□□ 2.39
SCRIB-207ENST00000531942 PHF14O94880 888 aa29.96■■■□□ 2.39
SCRIB-207ENST00000531942 SMIM5Q71RC9 77 aa29.96■■■□□ 2.39
SCRIB-207ENST00000531942 MORC1Q86VD1 984 aa29.95■■■□□ 2.39
SCRIB-207ENST00000531942 LINC00116Q8NCU8 138 aa29.95■■■□□ 2.39
SCRIB-207ENST00000531942 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.93■■■□□ 2.38
SCRIB-207ENST00000531942 ATG3Q9NT62 314 aa29.92■■■□□ 2.38
SCRIB-207ENST00000531942 ATP6V1AP38606 617 aa29.91■■■□□ 2.38
SCRIB-207ENST00000531942 ITPK1Q13572 414 aa29.91■■■□□ 2.38
SCRIB-207ENST00000531942 YBX3P16989 372 aaKnown RBP eCLIP29.9■■■□□ 2.38
SCRIB-207ENST00000531942 SSFA2P28290 1259 aa29.9■■■□□ 2.38
SCRIB-207ENST00000531942 KNSTRNQ9Y448 316 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms