RNA–Protein interactions for RNA: ENST00000531749.1

LINC02548-201, Transcript of long intergenic non-protein coding RNA 2548, humanhuman

TSL 3 BASIC

Gene LINC02548, Length 484 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02548-201ENST00000531749 GPR162Q16538 588 aa13.52□□□□□ -0.25
LINC02548-201ENST00000531749 TERF2IPQ9NYB0 399 aa13.52□□□□□ -0.25
LINC02548-201ENST00000531749 NBPF6Q5VWK0 638 aa13.51□□□□□ -0.25
LINC02548-201ENST00000531749 COL23A1Q86Y22 540 aaPredicted RBP13.51□□□□□ -0.25
LINC02548-201ENST00000531749 SYTL4Q96C24 671 aaPredicted RBP13.51□□□□□ -0.25
LINC02548-201ENST00000531749 NBPF4Q96M43 638 aa13.51□□□□□ -0.25
LINC02548-201ENST00000531749 DOT1LQ8TEK3 1739 aa13.5□□□□□ -0.25
LINC02548-201ENST00000531749 MEGF6O75095 1541 aa13.5□□□□□ -0.25
LINC02548-201ENST00000531749 ANKRD36BQ8N2N9 1353 aa13.5□□□□□ -0.25
LINC02548-201ENST00000531749 SENP3-EIF4A1A0A087X0R7 540 aa13.5□□□□□ -0.25
LINC02548-201ENST00000531749 ST20-MTHFSA0A0A6YYL1 179 aa13.5□□□□□ -0.25
LINC02548-201ENST00000531749 YBX3P16989 372 aaKnown RBP eCLIP13.5□□□□□ -0.25
LINC02548-201ENST00000531749 KLHL34Q8N239 644 aa13.5□□□□□ -0.25
LINC02548-201ENST00000531749 ZCRB1Q8TBF4 217 aaKnown RBP13.5□□□□□ -0.25
LINC02548-201ENST00000531749 TFCP2L1Q9NZI6 479 aa13.5□□□□□ -0.25
LINC02548-201ENST00000531749 RRS1Q15050 365 aaKnown RBP13.49□□□□□ -0.25
LINC02548-201ENST00000531749 USHBP1Q8N6Y0 703 aa13.49□□□□□ -0.25
LINC02548-201ENST00000531749 FYB1O15117 783 aa13.48□□□□□ -0.25
LINC02548-201ENST00000531749 POLD1P28340 1107 aa13.47□□□□□ -0.25
LINC02548-201ENST00000531749 AMPHP49418 695 aa13.47□□□□□ -0.25
LINC02548-201ENST00000531749 PELP1Q8IZL8 1130 aaKnown RBP13.47□□□□□ -0.25
LINC02548-201ENST00000531749 COG3Q96JB2 828 aa13.47□□□□□ -0.25
LINC02548-201ENST00000531749 CCNL1Q9UK58 526 aaPredicted RBP13.47□□□□□ -0.25
LINC02548-201ENST00000531749 SMIM5Q71RC9 77 aa13.46□□□□□ -0.25
LINC02548-201ENST00000531749 AMIGO3Q86WK7 504 aa13.46□□□□□ -0.25
LINC02548-201ENST00000531749 GGNBP2Q9H3C7 697 aa13.46□□□□□ -0.25
LINC02548-201ENST00000531749 HSP90AB2PQ58FF8 381 aa13.45□□□□□ -0.26
LINC02548-201ENST00000531749 MSL1Q68DK7 614 aa13.45□□□□□ -0.26
LINC02548-201ENST00000531749 TAF1LQ8IZX4 1826 aa13.43□□□□□ -0.26
LINC02548-201ENST00000531749 CYP27B1O15528 508 aa13.43□□□□□ -0.26
LINC02548-201ENST00000531749 GOLGB1Q14789 3259 aaKnown RBP13.42□□□□□ -0.26
LINC02548-201ENST00000531749 MSH5O43196 834 aa13.42□□□□□ -0.26
LINC02548-201ENST00000531749 USP47Q96K76 1375 aa13.41□□□□□ -0.26
LINC02548-201ENST00000531749 ITGB4P16144 1822 aa13.41□□□□□ -0.26
LINC02548-201ENST00000531749 GIGYF1O75420 1035 aaPredicted RBP13.4□□□□□ -0.26
LINC02548-201ENST00000531749 CARD14Q9BXL6 1004 aa13.4□□□□□ -0.26
LINC02548-201ENST00000531749 TONSLQ96HA7 1378 aa13.4□□□□□ -0.26
LINC02548-201ENST00000531749 C5P01031 1676 aa13.4□□□□□ -0.26
LINC02548-201ENST00000531749 TOGARAM1Q9Y4F4 1720 aa13.39□□□□□ -0.27
LINC02548-201ENST00000531749 GRIN3BO60391 1043 aa13.39□□□□□ -0.27
LINC02548-201ENST00000531749 TATP17735 454 aaPredicted RBP13.39□□□□□ -0.27
LINC02548-201ENST00000531749 MPRIPQ6WCQ1 1025 aa13.39□□□□□ -0.27
LINC02548-201ENST00000531749 RAPGEF4Q8WZA2 1011 aa13.39□□□□□ -0.27
LINC02548-201ENST00000531749 RTL1A6NKG5 1358 aa13.39□□□□□ -0.27
LINC02548-201ENST00000531749 INSRP06213 1382 aa13.38□□□□□ -0.27
LINC02548-201ENST00000531749 PIGBQ92521 554 aa13.38□□□□□ -0.27
LINC02548-201ENST00000531749 EMILIN1Q9Y6C2 1016 aa13.38□□□□□ -0.27
LINC02548-201ENST00000531749 MAP2P11137 1827 aaKnown RBP13.38□□□□□ -0.27
LINC02548-201ENST00000531749 CGNL1Q0VF96 1302 aa13.38□□□□□ -0.27
LINC02548-201ENST00000531749 PALLDQ8WX93 1383 aa13.37□□□□□ -0.27
LINC02548-201ENST00000531749 WWC3Q9ULE0 1092 aa13.37□□□□□ -0.27
LINC02548-201ENST00000531749 CD2APQ9Y5K6 639 aa13.37□□□□□ -0.27
LINC02548-201ENST00000531749 UBR3Q6ZT12 1888 aa13.37□□□□□ -0.27
LINC02548-201ENST00000531749 ATP10DQ9P241 1426 aa13.37□□□□□ -0.27
LINC02548-201ENST00000531749 NKX1-1Q15270 411 aaPredicted RBP13.36□□□□□ -0.27
LINC02548-201ENST00000531749 C4BP0C0L5 1744 aa13.35□□□□□ -0.27
LINC02548-201ENST00000531749 PCDH11XQ9BZA7 1347 aa13.35□□□□□ -0.27
LINC02548-201ENST00000531749 PCDH11YQ9BZA8 1340 aa13.35□□□□□ -0.27
LINC02548-201ENST00000531749 ADCY9O60503 1353 aa13.34□□□□□ -0.27
LINC02548-201ENST00000531749 ITPK1Q13572 414 aa13.34□□□□□ -0.27
LINC02548-201ENST00000531749 LINC00116Q8NCU8 138 aa13.34□□□□□ -0.27
LINC02548-201ENST00000531749 FLT4P35916 1363 aa13.33□□□□□ -0.27
LINC02548-201ENST00000531749 NCAPD2Q15021 1401 aa13.33□□□□□ -0.28
LINC02548-201ENST00000531749 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.33□□□□□ -0.28
LINC02548-201ENST00000531749 TMF1P82094 1093 aa13.33□□□□□ -0.28
LINC02548-201ENST00000531749 FLAD1Q8NFF5 587 aa13.33□□□□□ -0.28
LINC02548-201ENST00000531749 ASAP1Q9ULH1 1129 aa13.33□□□□□ -0.28
LINC02548-201ENST00000531749 KIF20BQ96Q89 1820 aa13.33□□□□□ -0.28
LINC02548-201ENST00000531749 PKD1L3Q7Z443 1732 aa13.33□□□□□ -0.28
LINC02548-201ENST00000531749 SLC24A1O60721 1099 aa13.32□□□□□ -0.28
LINC02548-201ENST00000531749 PHF14O94880 888 aa13.32□□□□□ -0.28
LINC02548-201ENST00000531749 IFFO2Q5TF58 517 aa13.32□□□□□ -0.28
LINC02548-201ENST00000531749 EYA1Q99502 592 aa13.32□□□□□ -0.28
LINC02548-201ENST00000531749 IGSF1Q8N6C5 1336 aa13.32□□□□□ -0.28
LINC02548-201ENST00000531749 CEP350Q5VT06 3117 aa13.32□□□□□ -0.28
LINC02548-201ENST00000531749 LOC102724428A0A0B4J2F2 783 aa13.31□□□□□ -0.28
LINC02548-201ENST00000531749 SIK1P57059 783 aa13.31□□□□□ -0.28
LINC02548-201ENST00000531749 ZNF526Q8TF50 670 aaPredicted RBP13.31□□□□□ -0.28
LINC02548-201ENST00000531749 SMARCC1Q92922 1105 aaPredicted RBP13.31□□□□□ -0.28
LINC02548-201ENST00000531749 SLC4A9Q96Q91 983 aa13.31□□□□□ -0.28
LINC02548-201ENST00000531749 KIF24Q5T7B8 1368 aa13.31□□□□□ -0.28
LINC02548-201ENST00000531749 AK7Q96M32 723 aa13.3□□□□□ -0.28
LINC02548-201ENST00000531749 GPBP1L1Q9HC44 474 aaPredicted RBP13.3□□□□□ -0.28
LINC02548-201ENST00000531749 WASHC2AQ641Q2 1341 aa13.3□□□□□ -0.28
LINC02548-201ENST00000531749 SMG6Q86US8 1419 aaKnown RBP13.3□□□□□ -0.28
LINC02548-201ENST00000531749 KIF3CO14782 793 aa13.29□□□□□ -0.28
LINC02548-201ENST00000531749 ATG3Q9NT62 314 aa13.29□□□□□ -0.28
LINC02548-201ENST00000531749 POLKQ9UBT6 870 aa13.29□□□□□ -0.28
LINC02548-201ENST00000531749 KIAA1551Q9HCM1 1747 aa13.28□□□□□ -0.28
LINC02548-201ENST00000531749 PPM1GO15355 546 aaPredicted RBP13.28□□□□□ -0.28
LINC02548-201ENST00000531749 PHKG2P15735 406 aa13.28□□□□□ -0.28
LINC02548-201ENST00000531749 SSFA2P28290 1259 aa13.28□□□□□ -0.28
LINC02548-201ENST00000531749 NSD3Q9BZ95 1437 aa13.28□□□□□ -0.28
LINC02548-201ENST00000531749 HSPA6P17066 643 aa13.27□□□□□ -0.29
LINC02548-201ENST00000531749 ATP6V1AP38606 617 aa13.27□□□□□ -0.29
LINC02548-201ENST00000531749 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.27□□□□□ -0.29
LINC02548-201ENST00000531749 SPG7Q9UQ90 795 aa13.27□□□□□ -0.29
LINC02548-201ENST00000531749 GNPATO15228 680 aa13.26□□□□□ -0.29
LINC02548-201ENST00000531749 MYH14Q7Z406 1995 aaKnown RBP13.26□□□□□ -0.29
LINC02548-201ENST00000531749 N4BP2Q86UW6 1770 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms