RNA–Protein interactions for RNA: ENST00000531733.1

FDFT1-220, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-220ENST00000531733 FYB1O15117 783 aa29.53■■■□□ 2.32
FDFT1-220ENST00000531733 NBPF6Q5VWK0 638 aa29.53■■■□□ 2.32
FDFT1-220ENST00000531733 USHBP1Q8N6Y0 703 aa29.53■■■□□ 2.32
FDFT1-220ENST00000531733 NBPF4Q96M43 638 aa29.53■■■□□ 2.32
FDFT1-220ENST00000531733 SLC27A3Q5K4L6 730 aa29.52■■■□□ 2.32
FDFT1-220ENST00000531733 ZCRB1Q8TBF4 217 aaKnown RBP29.52■■■□□ 2.32
FDFT1-220ENST00000531733 QSER1Q2KHR3 1735 aa29.51■■■□□ 2.32
FDFT1-220ENST00000531733 PNPLA7Q6ZV29 1317 aa29.51■■■□□ 2.32
FDFT1-220ENST00000531733 LY75O60449 1722 aa29.51■■■□□ 2.31
FDFT1-220ENST00000531733 RTL1A6NKG5 1358 aa29.5■■■□□ 2.31
FDFT1-220ENST00000531733 USP47Q96K76 1375 aa29.5■■■□□ 2.31
FDFT1-220ENST00000531733 MAP3K5Q99683 1374 aa29.48■■■□□ 2.31
FDFT1-220ENST00000531733 ZNF784Q8NCA9 323 aaPredicted RBP29.47■■■□□ 2.31
FDFT1-220ENST00000531733 COL24A1Q17RW2 1714 aa29.47■■■□□ 2.31
FDFT1-220ENST00000531733 TMF1P82094 1093 aa29.46■■■□□ 2.31
FDFT1-220ENST00000531733 SLC24A1O60721 1099 aa29.45■■■□□ 2.31
FDFT1-220ENST00000531733 HSP90AB2PQ58FF8 381 aa29.44■■■□□ 2.3
FDFT1-220ENST00000531733 TFCP2L1Q9NZI6 479 aa29.44■■■□□ 2.3
FDFT1-220ENST00000531733 KIF20BQ96Q89 1820 aa29.43■■■□□ 2.3
FDFT1-220ENST00000531733 SLC16A10Q8TF71 515 aa29.42■■■□□ 2.3
FDFT1-220ENST00000531733 GOLGB1Q14789 3259 aaKnown RBP29.42■■■□□ 2.3
FDFT1-220ENST00000531733 CHD4Q14839 1912 aa29.41■■■□□ 2.3
FDFT1-220ENST00000531733 CCNL1Q9UK58 526 aaPredicted RBP29.41■■■□□ 2.3
FDFT1-220ENST00000531733 KLHL34Q8N239 644 aa29.4■■■□□ 2.3
FDFT1-220ENST00000531733 CARD14Q9BXL6 1004 aa29.39■■■□□ 2.3
FDFT1-220ENST00000531733 INSRP06213 1382 aa29.39■■■□□ 2.29
FDFT1-220ENST00000531733 RAPGEF4Q8WZA2 1011 aa29.38■■■□□ 2.29
FDFT1-220ENST00000531733 SMG6Q86US8 1419 aaKnown RBP29.37■■■□□ 2.29
FDFT1-220ENST00000531733 POLD1P28340 1107 aa29.36■■■□□ 2.29
FDFT1-220ENST00000531733 NLGN2Q8NFZ4 835 aa29.36■■■□□ 2.29
FDFT1-220ENST00000531733 CGNL1Q0VF96 1302 aa29.36■■■□□ 2.29
FDFT1-220ENST00000531733 FLT4P35916 1363 aa29.36■■■□□ 2.29
FDFT1-220ENST00000531733 TATP17735 454 aaPredicted RBP29.35■■■□□ 2.29
FDFT1-220ENST00000531733 COL23A1Q86Y22 540 aaPredicted RBP29.35■■■□□ 2.29
FDFT1-220ENST00000531733 GPR162Q16538 588 aa29.34■■■□□ 2.29
FDFT1-220ENST00000531733 EMILIN1Q9Y6C2 1016 aa29.34■■■□□ 2.29
FDFT1-220ENST00000531733 NSD3Q9BZ95 1437 aa29.33■■■□□ 2.29
FDFT1-220ENST00000531733 TOGARAM1Q9Y4F4 1720 aa29.33■■■□□ 2.29
FDFT1-220ENST00000531733 CYP27B1O15528 508 aa29.32■■■□□ 2.28
FDFT1-220ENST00000531733 PCDH11XQ9BZA7 1347 aa29.31■■■□□ 2.28
FDFT1-220ENST00000531733 PCDH11YQ9BZA8 1340 aa29.31■■■□□ 2.28
FDFT1-220ENST00000531733 TRIM26Q12899 539 aaPredicted RBP29.31■■■□□ 2.28
FDFT1-220ENST00000531733 C5P01031 1676 aa29.31■■■□□ 2.28
FDFT1-220ENST00000531733 MSH5O43196 834 aa29.29■■■□□ 2.28
FDFT1-220ENST00000531733 MSL1Q68DK7 614 aa29.29■■■□□ 2.28
FDFT1-220ENST00000531733 PELP1Q8IZL8 1130 aaKnown RBP29.29■■■□□ 2.28
FDFT1-220ENST00000531733 KIF24Q5T7B8 1368 aa29.28■■■□□ 2.28
FDFT1-220ENST00000531733 CDCA8Q53HL2 280 aa29.28■■■□□ 2.28
FDFT1-220ENST00000531733 MPRIPQ6WCQ1 1025 aa29.28■■■□□ 2.28
FDFT1-220ENST00000531733 TAF1LQ8IZX4 1826 aa29.27■■■□□ 2.28
FDFT1-220ENST00000531733 PKD1L3Q7Z443 1732 aa29.27■■■□□ 2.28
FDFT1-220ENST00000531733 ITGB4P16144 1822 aa29.27■■■□□ 2.28
FDFT1-220ENST00000531733 PALLDQ8WX93 1383 aa29.26■■■□□ 2.28
FDFT1-220ENST00000531733 NCAPD2Q15021 1401 aa29.25■■■□□ 2.27
FDFT1-220ENST00000531733 AMIGO3Q86WK7 504 aa29.24■■■□□ 2.27
FDFT1-220ENST00000531733 ANKRD26Q9UPS8 1709 aa29.24■■■□□ 2.27
FDFT1-220ENST00000531733 PPM1GO15355 546 aaPredicted RBP29.23■■■□□ 2.27
FDFT1-220ENST00000531733 YBX3P16989 372 aaKnown RBP eCLIP29.23■■■□□ 2.277e-54■□□□□ 10.1
FDFT1-220ENST00000531733 SMIM5Q71RC9 77 aa29.22■■■□□ 2.27
FDFT1-220ENST00000531733 PIGBQ92521 554 aa29.2■■■□□ 2.26
FDFT1-220ENST00000531733 C4BP0C0L5 1744 aa29.2■■■□□ 2.26
FDFT1-220ENST00000531733 MAP2P11137 1827 aaKnown RBP29.19■■■□□ 2.26
FDFT1-220ENST00000531733 EYA1Q99502 592 aa29.18■■■□□ 2.26
FDFT1-220ENST00000531733 WASHC2AQ641Q2 1341 aa29.18■■■□□ 2.26
FDFT1-220ENST00000531733 NKX1-1Q15270 411 aaPredicted RBP29.17■■■□□ 2.26
FDFT1-220ENST00000531733 C1QTNF8P60827 252 aa29.16■■■□□ 2.26
FDFT1-220ENST00000531733 POLKQ9UBT6 870 aa29.15■■■□□ 2.26
FDFT1-220ENST00000531733 UBR3Q6ZT12 1888 aa29.14■■■□□ 2.26
FDFT1-220ENST00000531733 SMARCC1Q92922 1105 aaPredicted RBP29.13■■■□□ 2.25
FDFT1-220ENST00000531733 SPG7Q9UQ90 795 aa29.12■■■□□ 2.25
FDFT1-220ENST00000531733 PHF14O94880 888 aa29.11■■■□□ 2.25
FDFT1-220ENST00000531733 LINC00116Q8NCU8 138 aa29.11■■■□□ 2.25
FDFT1-220ENST00000531733 FLAD1Q8NFF5 587 aa29.11■■■□□ 2.25
FDFT1-220ENST00000531733 AK7Q96M32 723 aa29.11■■■□□ 2.25
FDFT1-220ENST00000531733 POLR3GLQ9BT43 218 aa29.11■■■□□ 2.25
FDFT1-220ENST00000531733 SENP3-EIF4A1A0A087X0R7 540 aa29.1■■■□□ 2.25
FDFT1-220ENST00000531733 TNNT2P45379 298 aaPredicted RBP29.09■■■□□ 2.25
FDFT1-220ENST00000531733 ASAP1Q9ULH1 1129 aa29.09■■■□□ 2.25
FDFT1-220ENST00000531733 LOC102724428A0A0B4J2F2 783 aa29.08■■■□□ 2.25
FDFT1-220ENST00000531733 SIK1P57059 783 aa29.08■■■□□ 2.25
FDFT1-220ENST00000531733 EIF4A2Q14240 407 aaKnown RBP29.08■■■□□ 2.25
FDFT1-220ENST00000531733 CD2APQ9Y5K6 639 aa29.08■■■□□ 2.25
FDFT1-220ENST00000531733 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.07■■■□□ 2.24
FDFT1-220ENST00000531733 GRIN3BO60391 1043 aa29.07■■■□□ 2.24
FDFT1-220ENST00000531733 PHKG2P15735 406 aa29.07■■■□□ 2.24
FDFT1-220ENST00000531733 ITPK1Q13572 414 aa29.07■■■□□ 2.24
FDFT1-220ENST00000531733 TIMELESSQ9UNS1 1208 aa29.07■■■□□ 2.24
FDFT1-220ENST00000531733 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.06■■■□□ 2.24
FDFT1-220ENST00000531733 TMOD3Q9NYL9 352 aa29.05■■■□□ 2.24
FDFT1-220ENST00000531733 GIGYF1O75420 1035 aaPredicted RBP29.04■■■□□ 2.24
FDFT1-220ENST00000531733 IFNL2Q8IZJ0 200 aa29.03■■■□□ 2.24
FDFT1-220ENST00000531733 WWC3Q9ULE0 1092 aa29.03■■■□□ 2.24
FDFT1-220ENST00000531733 PCGF6Q9BYE7 350 aa29.02■■■□□ 2.24
FDFT1-220ENST00000531733 ATG3Q9NT62 314 aa29.02■■■□□ 2.24
FDFT1-220ENST00000531733 HMGB2P26583 209 aaKnown RBP29.01■■■□□ 2.23
FDFT1-220ENST00000531733 SSFA2P28290 1259 aa29.01■■■□□ 2.23
FDFT1-220ENST00000531733 GNPATO15228 680 aa28.99■■■□□ 2.23
FDFT1-220ENST00000531733 ATP6V1AP38606 617 aa28.99■■■□□ 2.23
FDFT1-220ENST00000531733 IGSF1Q8N6C5 1336 aa28.98■■■□□ 2.23
FDFT1-220ENST00000531733 ATP10DQ9P241 1426 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms