RNA–Protein interactions for RNA: ENST00000531657.1

PPFIA1-219, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 2

Gene PPFIA1, Length 3,036 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-219ENST00000531657 LRRC7Q96NW7 1537 aa11.91□□□□□ -0.5
PPFIA1-219ENST00000531657 NCLP19338 710 aaKnown RBP11.91□□□□□ -0.5
PPFIA1-219ENST00000531657 HOXC9P31274 260 aa11.91□□□□□ -0.5
PPFIA1-219ENST00000531657 NUTM1Q86Y26 1132 aa11.91□□□□□ -0.5
PPFIA1-219ENST00000531657 IL17REQ8NFR9 667 aa11.9□□□□□ -0.5
PPFIA1-219ENST00000531657 SETBP1Q9Y6X0 1596 aa11.9□□□□□ -0.5
PPFIA1-219ENST00000531657 HSCBQ8IWL3 235 aa11.89□□□□□ -0.51
PPFIA1-219ENST00000531657 API5Q9BZZ5 524 aaKnown RBP11.89□□□□□ -0.51
PPFIA1-219ENST00000531657 SIL1Q9H173 461 aa11.89□□□□□ -0.51
PPFIA1-219ENST00000531657 MYO3AQ8NEV4 1616 aa11.89□□□□□ -0.51
PPFIA1-219ENST00000531657 GNAT3A8MTJ3 354 aa11.89□□□□□ -0.51
PPFIA1-219ENST00000531657 LRRFIP2Q9Y608 721 aaKnown RBP11.89□□□□□ -0.51
PPFIA1-219ENST00000531657 MSH6P52701 1360 aa11.89□□□□□ -0.51
PPFIA1-219ENST00000531657 CD2BP2O95400 341 aaKnown RBP11.88□□□□□ -0.51
PPFIA1-219ENST00000531657 TBC1D9Q6ZT07 1266 aa11.88□□□□□ -0.51
PPFIA1-219ENST00000531657 PUS7Q96PZ0 661 aaKnown RBP11.88□□□□□ -0.51
PPFIA1-219ENST00000531657 IQSEC2Q5JU85 1478 aa11.88□□□□□ -0.51
PPFIA1-219ENST00000531657 STRN4Q9NRL3 753 aa11.88□□□□□ -0.51
PPFIA1-219ENST00000531657 PPP6R1Q9UPN7 881 aa11.88□□□□□ -0.51
PPFIA1-219ENST00000531657 NINLQ9Y2I6 1382 aa11.88□□□□□ -0.51
PPFIA1-219ENST00000531657 NLRP1Q9C000 1473 aa11.88□□□□□ -0.51
PPFIA1-219ENST00000531657 ADAMTS13Q76LX8 1427 aa11.88□□□□□ -0.51
PPFIA1-219ENST00000531657 NUCB1Q02818 461 aa11.87□□□□□ -0.51
PPFIA1-219ENST00000531657 CHPF2Q9P2E5 772 aa11.87□□□□□ -0.51
PPFIA1-219ENST00000531657 PNMA6EA0A0J9YXQ4 647 aa11.87□□□□□ -0.51
PPFIA1-219ENST00000531657 FLIIQ13045 1269 aa11.87□□□□□ -0.51
PPFIA1-219ENST00000531657 AXIN2Q9Y2T1 843 aa11.87□□□□□ -0.51
PPFIA1-219ENST00000531657 ALDH1L2Q3SY69 923 aa11.86□□□□□ -0.51
PPFIA1-219ENST00000531657 CCDC85AQ96PX6 553 aaPredicted RBP11.86□□□□□ -0.51
PPFIA1-219ENST00000531657 ZFYVE9O95405 1425 aa11.86□□□□□ -0.51
PPFIA1-219ENST00000531657 TAF7Q15545 349 aaPredicted RBP11.86□□□□□ -0.51
PPFIA1-219ENST00000531657 TBC1D32Q96NH3 1257 aa11.86□□□□□ -0.51
PPFIA1-219ENST00000531657 TBX22Q9Y458 520 aa11.86□□□□□ -0.51
PPFIA1-219ENST00000531657 FAM135BQ49AJ0 1406 aa11.86□□□□□ -0.51
PPFIA1-219ENST00000531657 IFT172Q9UG01 1749 aa11.86□□□□□ -0.51
PPFIA1-219ENST00000531657 BTBD11A6QL63 1104 aa11.86□□□□□ -0.51
PPFIA1-219ENST00000531657 CHL1O00533 1208 aa11.86□□□□□ -0.51
PPFIA1-219ENST00000531657 CHMP3Q9Y3E7 222 aa11.86□□□□□ -0.51
PPFIA1-219ENST00000531657 PLEKHG3A1L390 1219 aa11.85□□□□□ -0.51
PPFIA1-219ENST00000531657 PI4KAP2A4QPH2 592 aa11.85□□□□□ -0.51
PPFIA1-219ENST00000531657 SURF6O75683 361 aaKnown RBP11.85□□□□□ -0.51
PPFIA1-219ENST00000531657 C1orf141Q5JVX7 400 aa11.85□□□□□ -0.51
PPFIA1-219ENST00000531657 SMC5Q8IY18 1101 aa11.85□□□□□ -0.51
PPFIA1-219ENST00000531657 PI4KAP1Q8N8J0 262 aa11.85□□□□□ -0.51
PPFIA1-219ENST00000531657 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.85□□□□□ -0.51
PPFIA1-219ENST00000531657 SHPRHQ149N8 1683 aa11.85□□□□□ -0.51
PPFIA1-219ENST00000531657 PNPLA6Q8IY17 1366 aa11.85□□□□□ -0.51
PPFIA1-219ENST00000531657 GCP02774 474 aa11.85□□□□□ -0.51
PPFIA1-219ENST00000531657 CWF19L2Q2TBE0 894 aaKnown RBP11.85□□□□□ -0.51
PPFIA1-219ENST00000531657 KLHDC4Q8TBB5 520 aa11.85□□□□□ -0.51
PPFIA1-219ENST00000531657 USP6P35125 1406 aa11.85□□□□□ -0.51
PPFIA1-219ENST00000531657 PTCD1O75127 700 aaKnown RBP11.84□□□□□ -0.51
PPFIA1-219ENST00000531657 GSPT1P15170 499 aaKnown RBP11.84□□□□□ -0.51
PPFIA1-219ENST00000531657 GSE1Q14687 1217 aa11.84□□□□□ -0.51
PPFIA1-219ENST00000531657 PROSER3Q2NL68 480 aa11.84□□□□□ -0.51
PPFIA1-219ENST00000531657 KRT28Q7Z3Y7 464 aa11.84□□□□□ -0.51
PPFIA1-219ENST00000531657 PA2G4Q9UQ80 394 aaKnown RBP11.84□□□□□ -0.51
PPFIA1-219ENST00000531657 CPSF1Q10570 1443 aaKnown RBP11.84□□□□□ -0.51
PPFIA1-219ENST00000531657 HDAC1Q13547 482 aaPredicted RBP11.84□□□□□ -0.51
PPFIA1-219ENST00000531657 GAS2L2Q8NHY3 880 aa11.84□□□□□ -0.51
PPFIA1-219ENST00000531657 ANKRD24Q8TF21 1146 aa11.84□□□□□ -0.51
PPFIA1-219ENST00000531657 IL16Q14005 1332 aa11.84□□□□□ -0.51
PPFIA1-219ENST00000531657 KIAA1210Q9ULL0 1709 aa11.84□□□□□ -0.51
PPFIA1-219ENST00000531657 ATP7BP35670 1465 aa11.84□□□□□ -0.51
PPFIA1-219ENST00000531657 ZNF853P0CG23 659 aa11.84□□□□□ -0.51
PPFIA1-219ENST00000531657 ATF3P18847 181 aa11.84□□□□□ -0.51
PPFIA1-219ENST00000531657 CEP85Q6P2H3 762 aa11.84□□□□□ -0.51
PPFIA1-219ENST00000531657 ANO2Q9NQ90 1003 aa11.84□□□□□ -0.51
PPFIA1-219ENST00000531657 COL3A1P02461 1466 aaPredicted RBP11.83□□□□□ -0.52
PPFIA1-219ENST00000531657 NBPF7P0C2Y1 421 aaPredicted RBP11.83□□□□□ -0.52
PPFIA1-219ENST00000531657 UPF3BQ9BZI7 483 aaKnown RBP11.83□□□□□ -0.52
PPFIA1-219ENST00000531657 NDUFB9Q9Y6M9 179 aa11.83□□□□□ -0.52
PPFIA1-219ENST00000531657 UBTFL1P0CB47 393 aaPredicted RBP11.82□□□□□ -0.52
PPFIA1-219ENST00000531657 C9orf78Q9NZ63 289 aaPredicted RBP11.82□□□□□ -0.52
PPFIA1-219ENST00000531657 SRGAP3O43295 1099 aa11.82□□□□□ -0.52
PPFIA1-219ENST00000531657 CT47B1P0C2W7 299 aaPredicted RBP11.82□□□□□ -0.52
PPFIA1-219ENST00000531657 SYTL4Q96C24 671 aaPredicted RBP11.82□□□□□ -0.52
PPFIA1-219ENST00000531657 FLT4P35916 1363 aa11.81□□□□□ -0.52
PPFIA1-219ENST00000531657 SDSP20132 328 aa11.81□□□□□ -0.52
PPFIA1-219ENST00000531657 PLEKHM2Q8IWE5 1019 aa11.81□□□□□ -0.52
PPFIA1-219ENST00000531657 KAT6BQ8WYB5 2073 aa11.81□□□□□ -0.52
PPFIA1-219ENST00000531657 SRCAPQ6ZRS2 3230 aa11.81□□□□□ -0.52
PPFIA1-219ENST00000531657 ATP5J2-PTCD1G3V325 749 aa11.81□□□□□ -0.52
PPFIA1-219ENST00000531657 PPFIA3O75145 1194 aa11.81□□□□□ -0.52
PPFIA1-219ENST00000531657 CCDC30Q5VVM6 783 aa11.81□□□□□ -0.52
PPFIA1-219ENST00000531657 NFATC2IPQ8NCF5 419 aa11.81□□□□□ -0.52
PPFIA1-219ENST00000531657 PLEKHG1Q9ULL1 1385 aa11.8□□□□□ -0.52
PPFIA1-219ENST00000531657 MAP2P11137 1827 aaKnown RBP11.8□□□□□ -0.52
PPFIA1-219ENST00000531657 GNAI2P04899 355 aa11.8□□□□□ -0.52
PPFIA1-219ENST00000531657 RAPGEF4Q8WZA2 1011 aa11.8□□□□□ -0.52
PPFIA1-219ENST00000531657 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.79□□□□□ -0.52
PPFIA1-219ENST00000531657 FAM177BA6PVY3 158 aa11.79□□□□□ -0.52
PPFIA1-219ENST00000531657 UNC5CLQ8IV45 518 aa11.79□□□□□ -0.52
PPFIA1-219ENST00000531657 PPP1R42Q7Z4L9 355 aa11.78□□□□□ -0.52
PPFIA1-219ENST00000531657 GCC1Q96CN9 775 aa11.78□□□□□ -0.52
PPFIA1-219ENST00000531657 CDC45O75419 566 aa11.78□□□□□ -0.52
PPFIA1-219ENST00000531657 CPA1P15085 419 aa11.78□□□□□ -0.52
PPFIA1-219ENST00000531657 ABCC4O15439 1325 aa11.78□□□□□ -0.52
PPFIA1-219ENST00000531657 PKP1Q13835 747 aa11.78□□□□□ -0.52
PPFIA1-219ENST00000531657 HMMRO75330 724 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms