RNA–Protein interactions for RNA: ENST00000531596.5

RNASEH2C-205, Transcript of ribonuclease H2 subunit C, human

TSL 3

Gene RNASEH2C, Length 968 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNASEH2C-205	ENST00000531596	RSPH6A	Q9H0K4	717 aa		28.79	■■■□□ 2.2
RNASEH2C-205	ENST00000531596	DDB1	Q16531	1140 aa		28.78	■■■□□ 2.2
RNASEH2C-205	ENST00000531596	SEPT12	Q8IYM1	358 aa		28.78	■■■□□ 2.2
RNASEH2C-205	ENST00000531596	WNK3	Q9BYP7	1800 aa		28.78	■■■□□ 2.2
RNASEH2C-205	ENST00000531596	DISP2	A7MBM2	1401 aa		28.77	■■■□□ 2.2
RNASEH2C-205	ENST00000531596	PARP4	Q9UKK3	1724 aa	Known RBP	28.77	■■■□□ 2.2
RNASEH2C-205	ENST00000531596	PLEKHO1	Q53GL0	409 aa	Predicted RBP	28.77	■■■□□ 2.2
RNASEH2C-205	ENST00000531596	MEGF6	O75095	1541 aa		28.77	■■■□□ 2.2
RNASEH2C-205	ENST00000531596	MAPK8IP3	Q9UPT6	1336 aa		28.76	■■■□□ 2.19
RNASEH2C-205	ENST00000531596	ONECUT3	O60422	494 aa	Predicted RBP	28.76	■■■□□ 2.19
RNASEH2C-205	ENST00000531596	ZCRB1	Q8TBF4	217 aa	Known RBP	28.76	■■■□□ 2.19
RNASEH2C-205	ENST00000531596	SPG7	Q9UQ90	795 aa		28.76	■■■□□ 2.19
RNASEH2C-205	ENST00000531596	PDE3B	Q13370	1112 aa		28.74	■■■□□ 2.19
RNASEH2C-205	ENST00000531596	AMOT	Q4VCS5	1084 aa		28.74	■■■□□ 2.19
RNASEH2C-205	ENST00000531596	OVOS2	A0A0G2JMS6	1433 aa		28.74	■■■□□ 2.19
RNASEH2C-205	ENST00000531596	CCDC146	Q8IYE0	955 aa		28.72	■■■□□ 2.19
RNASEH2C-205	ENST00000531596	DDX54	Q8TDD1	881 aa	Known RBP	28.71	■■■□□ 2.19
RNASEH2C-205	ENST00000531596	RUNDC1	Q96C34	613 aa		28.71	■■■□□ 2.19
RNASEH2C-205	ENST00000531596	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	28.71	■■■□□ 2.19
RNASEH2C-205	ENST00000531596	PLEKHG2	Q9H7P9	1386 aa		28.71	■■■□□ 2.19
RNASEH2C-205	ENST00000531596	THSD7A	Q9UPZ6	1657 aa		28.7	■■■□□ 2.19
RNASEH2C-205	ENST00000531596	TNS2	Q63HR2	1409 aa		28.69	■■■□□ 2.18
RNASEH2C-205	ENST00000531596	ZNF530	Q6P9A1	599 aa	Predicted RBP	28.68	■■■□□ 2.18
RNASEH2C-205	ENST00000531596	GAS2L2	Q8NHY3	880 aa		28.68	■■■□□ 2.18
RNASEH2C-205	ENST00000531596	PCDH11X	Q9BZA7	1347 aa		28.68	■■■□□ 2.18
RNASEH2C-205	ENST00000531596	PCDH11Y	Q9BZA8	1340 aa		28.68	■■■□□ 2.18
RNASEH2C-205	ENST00000531596	C1orf141	Q5JVX7	400 aa		28.67	■■■□□ 2.18
RNASEH2C-205	ENST00000531596	PHACTR3	Q96KR7	559 aa		28.67	■■■□□ 2.18
RNASEH2C-205	ENST00000531596	PLEKHF1	Q96S99	279 aa		28.67	■■■□□ 2.18
RNASEH2C-205	ENST00000531596	LRRC37A3	O60309	1634 aa		28.67	■■■□□ 2.18
RNASEH2C-205	ENST00000531596	RGS12	O14924	1447 aa		28.67	■■■□□ 2.18
RNASEH2C-205	ENST00000531596	MTHFSD	Q2M296	383 aa	Known RBP	28.66	■■■□□ 2.18
RNASEH2C-205	ENST00000531596	KRT27	Q7Z3Y8	459 aa		28.65	■■■□□ 2.18
RNASEH2C-205	ENST00000531596	IFNL2	Q8IZJ0	200 aa		28.65	■■■□□ 2.18
RNASEH2C-205	ENST00000531596	PKD1L3	Q7Z443	1732 aa		28.64	■■■□□ 2.18
RNASEH2C-205	ENST00000531596	HSP90AB1	P08238	724 aa	Known RBP	28.6	■■■□□ 2.17
RNASEH2C-205	ENST00000531596	PHKG2	P15735	406 aa		28.6	■■■□□ 2.17
RNASEH2C-205	ENST00000531596	NFE2L2	Q16236	605 aa		28.6	■■■□□ 2.17
RNASEH2C-205	ENST00000531596	AKAP4	Q5JQC9	854 aa		28.6	■■■□□ 2.17
RNASEH2C-205	ENST00000531596	BRWD3	Q6RI45	1802 aa		28.59	■■■□□ 2.17
RNASEH2C-205	ENST00000531596	CYP27B1	O15528	508 aa		28.59	■■■□□ 2.17
RNASEH2C-205	ENST00000531596	MARCH10	Q8NA82	808 aa	Predicted RBP	28.59	■■■□□ 2.17
RNASEH2C-205	ENST00000531596	NEUROD2	Q15784	382 aa		28.58	■■■□□ 2.17
RNASEH2C-205	ENST00000531596	GNAT3	A8MTJ3	354 aa		28.57	■■■□□ 2.16
RNASEH2C-205	ENST00000531596	APAF1	O14727	1248 aa		28.57	■■■□□ 2.16
RNASEH2C-205	ENST00000531596	RTF1	Q92541	710 aa	Known RBP	28.57	■■■□□ 2.16
RNASEH2C-205	ENST00000531596	TMPO	P42166	694 aa	Known RBP	28.56	■■■□□ 2.16
RNASEH2C-205	ENST00000531596	RIPK4	P57078	832 aa		28.56	■■■□□ 2.16
RNASEH2C-205	ENST00000531596	SHANK3	Q9BYB0	1731 aa		28.56	■■■□□ 2.16
RNASEH2C-205	ENST00000531596	RRP7A	Q9Y3A4	280 aa	Known RBP	28.56	■■■□□ 2.16
RNASEH2C-205	ENST00000531596	FAM182B	Q5T319	152 aa		28.55	■■■□□ 2.16
RNASEH2C-205	ENST00000531596	MAP3K5	Q99683	1374 aa		28.54	■■■□□ 2.16
RNASEH2C-205	ENST00000531596	LMOD3	Q0VAK6	560 aa		28.53	■■■□□ 2.16
RNASEH2C-205	ENST00000531596	MPRIP	Q6WCQ1	1025 aa		28.53	■■■□□ 2.16
RNASEH2C-205	ENST00000531596	FAM196A	Q6ZSG2	479 aa		28.52	■■■□□ 2.16
RNASEH2C-205	ENST00000531596	DCAF5	Q96JK2	942 aa		28.52	■■■□□ 2.16
RNASEH2C-205	ENST00000531596	SENP3-EIF4A1	A0A087X0R7	540 aa		28.51	■■■□□ 2.15
RNASEH2C-205	ENST00000531596	NKX1-1	Q15270	411 aa	Predicted RBP	28.51	■■■□□ 2.15
RNASEH2C-205	ENST00000531596	HTATSF1	O43719	755 aa	Known RBP	28.5	■■■□□ 2.15
RNASEH2C-205	ENST00000531596	SALL2	Q9Y467	1007 aa	Predicted RBP	28.49	■■■□□ 2.15
RNASEH2C-205	ENST00000531596	RNMT	O43148	476 aa	Known RBP	28.48	■■■□□ 2.15
RNASEH2C-205	ENST00000531596	ACSBG1	Q96GR2	724 aa		28.48	■■■□□ 2.15
RNASEH2C-205	ENST00000531596	SYTL4	Q96C24	671 aa	Predicted RBP	28.47	■■■□□ 2.15
RNASEH2C-205	ENST00000531596	KAT6B	Q8WYB5	2073 aa		28.46	■■■□□ 2.15
RNASEH2C-205	ENST00000531596	DLG5	Q8TDM6	1919 aa		28.46	■■■□□ 2.15
RNASEH2C-205	ENST00000531596	CABP4	P57796	275 aa		28.45	■■■□□ 2.14
RNASEH2C-205	ENST00000531596	MCM10	Q7L590	875 aa		28.45	■■■□□ 2.14
RNASEH2C-205	ENST00000531596	LGR6	Q9HBX8	967 aa		28.45	■■■□□ 2.14
RNASEH2C-205	ENST00000531596	TEF	Q10587	303 aa		28.44	■■■□□ 2.14
RNASEH2C-205	ENST00000531596	DCTN1	Q14203	1278 aa		28.44	■■■□□ 2.14
RNASEH2C-205	ENST00000531596	ERVV-2	B6SEH9	535 aa		28.43	■■■□□ 2.14
RNASEH2C-205	ENST00000531596	NGEF	Q8N5V2	710 aa		28.43	■■■□□ 2.14
RNASEH2C-205	ENST00000531596	KDM6A	O15550	1401 aa	Predicted RBP	28.43	■■■□□ 2.14
RNASEH2C-205	ENST00000531596	PRIM1	P49642	420 aa	Known RBP	28.42	■■■□□ 2.14
RNASEH2C-205	ENST00000531596	IL17RE	Q8NFR9	667 aa		28.42	■■■□□ 2.14
RNASEH2C-205	ENST00000531596	TMOD3	Q9NYL9	352 aa		28.42	■■■□□ 2.14
RNASEH2C-205	ENST00000531596	BCL9	O00512	1426 aa		28.42	■■■□□ 2.14
RNASEH2C-205	ENST00000531596	DOT1L	Q8TEK3	1739 aa		28.4	■■■□□ 2.14
RNASEH2C-205	ENST00000531596	SCN11A	Q9UI33	1791 aa		28.4	■■■□□ 2.14
RNASEH2C-205	ENST00000531596	HNRNPU	Q00839	825 aa	Known RBP eCLIP	28.4	■■■□□ 2.14
RNASEH2C-205	ENST00000531596	TRIM35	Q9UPQ4	493 aa		28.4	■■■□□ 2.14
RNASEH2C-205	ENST00000531596	NCBP3	Q53F19	620 aa	Known RBP	28.39	■■■□□ 2.14
RNASEH2C-205	ENST00000531596	TRIM37	O94972	964 aa		28.38	■■■□□ 2.13
RNASEH2C-205	ENST00000531596	CALD1	Q05682	793 aa	Known RBP	28.38	■■■□□ 2.13
RNASEH2C-205	ENST00000531596	CCDC27	Q2M243	656 aa		28.38	■■■□□ 2.13
RNASEH2C-205	ENST00000531596	THUMPD2	Q9BTF0	503 aa	Known RBP	28.38	■■■□□ 2.13
RNASEH2C-205	ENST00000531596	SLC52A2	Q9HAB3	445 aa		28.38	■■■□□ 2.13
RNASEH2C-205	ENST00000531596	VIRMA	Q69YN4	1812 aa	Known RBP	28.38	■■■□□ 2.13
RNASEH2C-205	ENST00000531596	NFATC2IP	Q8NCF5	419 aa		28.37	■■■□□ 2.13
RNASEH2C-205	ENST00000531596	TOGARAM1	Q9Y4F4	1720 aa		28.36	■■■□□ 2.13
RNASEH2C-205	ENST00000531596	KCNQ2	O43526	872 aa		28.36	■■■□□ 2.13
RNASEH2C-205	ENST00000531596	ILDR2	Q71H61	639 aa		28.36	■■■□□ 2.13
RNASEH2C-205	ENST00000531596	CEMIP	Q8WUJ3	1361 aa		28.36	■■■□□ 2.13
RNASEH2C-205	ENST00000531596	BCL11B	Q9C0K0	894 aa	Predicted RBP	28.35	■■■□□ 2.13
RNASEH2C-205	ENST00000531596	SF3B2	Q13435	895 aa	Known RBP	28.34	■■■□□ 2.13
RNASEH2C-205	ENST00000531596	WWC1	Q8IX03	1113 aa		28.34	■■■□□ 2.13
RNASEH2C-205	ENST00000531596	SBF2	Q86WG5	1849 aa		28.34	■■■□□ 2.13
RNASEH2C-205	ENST00000531596	NHS	Q6T4R5	1651 aa		28.33	■■■□□ 2.13
RNASEH2C-205	ENST00000531596	ADAMTS7	Q9UKP4	1686 aa		28.33	■■■□□ 2.13
RNASEH2C-205	ENST00000531596	TAF7	Q15545	349 aa	Predicted RBP	28.33	■■■□□ 2.13

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms