RNA–Protein interactions for RNA: ENST00000531589.5

SF3B2-212, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-212ENST00000531589 SYTL4Q96C24 671 aaPredicted RBP18.12■□□□□ 0.49
SF3B2-212ENST00000531589 MEGF6O75095 1541 aa18.1■□□□□ 0.49
SF3B2-212ENST00000531589 PPM1GO15355 546 aaPredicted RBP18.1■□□□□ 0.49
SF3B2-212ENST00000531589 PRIM1P49642 420 aaKnown RBP18.1■□□□□ 0.49
SF3B2-212ENST00000531589 SLC27A3Q5K4L6 730 aa18.1■□□□□ 0.49
SF3B2-212ENST00000531589 USHBP1Q8N6Y0 703 aa18.1■□□□□ 0.49
SF3B2-212ENST00000531589 EMILIN1Q9Y6C2 1016 aa18.1■□□□□ 0.49
SF3B2-212ENST00000531589 WASHC2AQ641Q2 1341 aa18.08■□□□□ 0.49
SF3B2-212ENST00000531589 DCAF8L1A6NGE4 600 aa18.08■□□□□ 0.48
SF3B2-212ENST00000531589 BTAF1O14981 1849 aa18.07■□□□□ 0.48
SF3B2-212ENST00000531589 PCDH11XQ9BZA7 1347 aa18.07■□□□□ 0.48
SF3B2-212ENST00000531589 PCDH11YQ9BZA8 1340 aa18.07■□□□□ 0.48
SF3B2-212ENST00000531589 ZBTB7AO95365 584 aa18.07■□□□□ 0.48
SF3B2-212ENST00000531589 HMGB2P26583 209 aaKnown RBP18.07■□□□□ 0.48
SF3B2-212ENST00000531589 MTFR1LQ9H019 292 aa18.06■□□□□ 0.48
SF3B2-212ENST00000531589 RGPD2P0DJD1 1756 aa18.06■□□□□ 0.48
SF3B2-212ENST00000531589 KAT6BQ8WYB5 2073 aa18.05■□□□□ 0.48
SF3B2-212ENST00000531589 PDGFDQ9GZP0 370 aaPredicted RBP18.05■□□□□ 0.48
SF3B2-212ENST00000531589 PANK3Q9H999 370 aa18.05■□□□□ 0.48
SF3B2-212ENST00000531589 LRRC4BQ9NT99 713 aa18.05■□□□□ 0.48
SF3B2-212ENST00000531589 CASZ1Q86V15 1759 aa18.04■□□□□ 0.48
SF3B2-212ENST00000531589 POLKQ9UBT6 870 aa18.04■□□□□ 0.48
SF3B2-212ENST00000531589 ATF5Q9Y2D1 282 aaPredicted RBP18.04■□□□□ 0.48
SF3B2-212ENST00000531589 SPG7Q9UQ90 795 aa18.03■□□□□ 0.48
SF3B2-212ENST00000531589 NSD2O96028 1365 aa18.03■□□□□ 0.48
SF3B2-212ENST00000531589 PTGER2P43116 358 aa18.01■□□□□ 0.47
SF3B2-212ENST00000531589 TNNT2P45379 298 aaPredicted RBP18.01■□□□□ 0.47
SF3B2-212ENST00000531589 SLC16A10Q8TF71 515 aa18.01■□□□□ 0.47
SF3B2-212ENST00000531589 AKT1S1Q96B36 256 aa18.01■□□□□ 0.47
SF3B2-212ENST00000531589 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.01■□□□□ 0.47
SF3B2-212ENST00000531589 PAPPAQ13219 1627 aa18.01■□□□□ 0.47
SF3B2-212ENST00000531589 DOT1LQ8TEK3 1739 aa18.01■□□□□ 0.47
SF3B2-212ENST00000531589 SHANK3Q9BYB0 1731 aa18.01■□□□□ 0.47
SF3B2-212ENST00000531589 ZNF827Q17R98 1081 aa18■□□□□ 0.47
SF3B2-212ENST00000531589 EYA1Q99502 592 aa18■□□□□ 0.47
SF3B2-212ENST00000531589 TFCP2L1Q9NZI6 479 aa18■□□□□ 0.47
SF3B2-212ENST00000531589 CCNL1Q9UK58 526 aaPredicted RBP18■□□□□ 0.47
SF3B2-212ENST00000531589 NCAPD2Q15021 1401 aa17.99■□□□□ 0.47
SF3B2-212ENST00000531589 ANKRD26Q9UPS8 1709 aa17.99■□□□□ 0.47
SF3B2-212ENST00000531589 CYP27B1O15528 508 aa17.99■□□□□ 0.47
SF3B2-212ENST00000531589 KNSTRNQ9Y448 316 aa17.99■□□□□ 0.47
SF3B2-212ENST00000531589 MPRIPQ6WCQ1 1025 aa17.98■□□□□ 0.47
SF3B2-212ENST00000531589 MORC1Q86VD1 984 aa17.98■□□□□ 0.47
SF3B2-212ENST00000531589 EIF4A2Q14240 407 aaKnown RBP17.97■□□□□ 0.47
SF3B2-212ENST00000531589 SMARCC1Q92922 1105 aaPredicted RBP17.97■□□□□ 0.47
SF3B2-212ENST00000531589 MAP2P11137 1827 aaKnown RBP17.97■□□□□ 0.47
SF3B2-212ENST00000531589 PLEKHG2Q9H7P9 1386 aa17.96■□□□□ 0.47
SF3B2-212ENST00000531589 NKX1-1Q15270 411 aaPredicted RBP17.96■□□□□ 0.47
SF3B2-212ENST00000531589 POLD1P28340 1107 aa17.95■□□□□ 0.46
SF3B2-212ENST00000531589 KCNQ4P56696 695 aa17.95■□□□□ 0.46
SF3B2-212ENST00000531589 IFNL2Q8IZJ0 200 aa17.95■□□□□ 0.46
SF3B2-212ENST00000531589 ARXQ96QS3 562 aa17.95■□□□□ 0.46
SF3B2-212ENST00000531589 SGIP1Q9BQI5 828 aa17.95■□□□□ 0.46
SF3B2-212ENST00000531589 LY75O60449 1722 aa17.95■□□□□ 0.46
SF3B2-212ENST00000531589 SYT17Q9BSW7 474 aa17.94■□□□□ 0.46
SF3B2-212ENST00000531589 FHDC1Q9C0D6 1143 aaPredicted RBP17.94■□□□□ 0.46
SF3B2-212ENST00000531589 PNPLA7Q6ZV29 1317 aa17.94■□□□□ 0.46
SF3B2-212ENST00000531589 PALLDQ8WX93 1383 aa17.93■□□□□ 0.46
SF3B2-212ENST00000531589 PKD1L3Q7Z443 1732 aa17.93■□□□□ 0.46
SF3B2-212ENST00000531589 IGSF1Q8N6C5 1336 aa17.92■□□□□ 0.46
SF3B2-212ENST00000531589 PHKG2P15735 406 aa17.91■□□□□ 0.46
SF3B2-212ENST00000531589 FLAD1Q8NFF5 587 aa17.91■□□□□ 0.46
SF3B2-212ENST00000531589 TMOD3Q9NYL9 352 aa17.91■□□□□ 0.46
SF3B2-212ENST00000531589 KIF7Q2M1P5 1343 aa17.91■□□□□ 0.46
SF3B2-212ENST00000531589 QSER1Q2KHR3 1735 aa17.9■□□□□ 0.46
SF3B2-212ENST00000531589 MSH5O43196 834 aa17.9■□□□□ 0.46
SF3B2-212ENST00000531589 HSP90AB1P08238 724 aaKnown RBP17.9■□□□□ 0.46
SF3B2-212ENST00000531589 PLEKHO1Q53GL0 409 aaPredicted RBP17.9■□□□□ 0.46
SF3B2-212ENST00000531589 PIGBQ92521 554 aa17.9■□□□□ 0.46
SF3B2-212ENST00000531589 YY1P25490 414 aa17.89■□□□□ 0.45
SF3B2-212ENST00000531589 AMOTQ4VCS5 1084 aa17.89■□□□□ 0.45
SF3B2-212ENST00000531589 MAP3K5Q99683 1374 aa17.89■□□□□ 0.45
SF3B2-212ENST00000531589 AMER1Q5JTC6 1135 aaPredicted RBP17.87■□□□□ 0.45
SF3B2-212ENST00000531589 COL23A1Q86Y22 540 aaPredicted RBP17.86■□□□□ 0.45
SF3B2-212ENST00000531589 DCAF5Q96JK2 942 aa17.86■□□□□ 0.45
SF3B2-212ENST00000531589 AK7Q96M32 723 aa17.86■□□□□ 0.45
SF3B2-212ENST00000531589 LOC102724428A0A0B4J2F2 783 aa17.85■□□□□ 0.45
SF3B2-212ENST00000531589 ERVV-2B6SEH9 535 aa17.85■□□□□ 0.45
SF3B2-212ENST00000531589 SIK1P57059 783 aa17.85■□□□□ 0.45
SF3B2-212ENST00000531589 TOGARAM1Q9Y4F4 1720 aa17.85■□□□□ 0.45
SF3B2-212ENST00000531589 KLHL34Q8N239 644 aa17.84■□□□□ 0.45
SF3B2-212ENST00000531589 ITGB4P16144 1822 aa17.84■□□□□ 0.45
SF3B2-212ENST00000531589 C5P01031 1676 aa17.83■□□□□ 0.45
SF3B2-212ENST00000531589 PER1O15534 1290 aaPredicted RBP17.83■□□□□ 0.44
SF3B2-212ENST00000531589 C1orf141Q5JVX7 400 aa17.83■□□□□ 0.44
SF3B2-212ENST00000531589 SULT6B1Q6IMI4 303 aa17.83■□□□□ 0.44
SF3B2-212ENST00000531589 ZNF530Q6P9A1 599 aaPredicted RBP17.83■□□□□ 0.44
SF3B2-212ENST00000531589 ASAP1Q9ULH1 1129 aa17.83■□□□□ 0.44
SF3B2-212ENST00000531589 IL13P35225 146 aa17.82■□□□□ 0.44
SF3B2-212ENST00000531589 ATP6V1AP38606 617 aa17.82■□□□□ 0.44
SF3B2-212ENST00000531589 MTHFSP49914 203 aa17.81■□□□□ 0.44
SF3B2-212ENST00000531589 CABP4P57796 275 aa17.81■□□□□ 0.44
SF3B2-212ENST00000531589 AEBP1Q8IUX7 1158 aa17.81■□□□□ 0.44
SF3B2-212ENST00000531589 ATG3Q9NT62 314 aa17.81■□□□□ 0.44
SF3B2-212ENST00000531589 KDRP35968 1356 aa17.8■□□□□ 0.44
SF3B2-212ENST00000531589 TUBGCP6Q96RT7 1819 aa17.8■□□□□ 0.44
SF3B2-212ENST00000531589 SSFA2P28290 1259 aa17.8■□□□□ 0.44
SF3B2-212ENST00000531589 CC2D1BQ5T0F9 858 aaKnown RBP17.8■□□□□ 0.44
SF3B2-212ENST00000531589 COL24A1Q17RW2 1714 aa17.8■□□□□ 0.44
SF3B2-212ENST00000531589 C4BP0C0L5 1744 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms