RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 TFIP11Q9UBB9 837 aaKnown RBP6.52□□□□□ -1.37
ECHDC1-221ENST00000531582 DOLKQ9UPQ8 538 aa6.52□□□□□ -1.37
ECHDC1-221ENST00000531582 CCDC9Q9Y3X0 531 aaKnown RBP6.52□□□□□ -1.37
ECHDC1-221ENST00000531582 ARID4BQ4LE39 1312 aaPredicted RBP6.51□□□□□ -1.37
ECHDC1-221ENST00000531582 PALM3A6NDB9 673 aaPredicted RBP6.51□□□□□ -1.37
ECHDC1-221ENST00000531582 TNFRSF10AO00220 468 aa6.51□□□□□ -1.37
ECHDC1-221ENST00000531582 RRP9O43818 475 aaKnown RBP6.51□□□□□ -1.37
ECHDC1-221ENST00000531582 PPP1R15AO75807 674 aaPredicted RBP6.51□□□□□ -1.37
ECHDC1-221ENST00000531582 MYCP01106 439 aaPredicted RBP6.51□□□□□ -1.37
ECHDC1-221ENST00000531582 NAP1L2Q9ULW6 460 aaPredicted RBP6.51□□□□□ -1.37
ECHDC1-221ENST00000531582 NRG2O14511 850 aaPredicted RBP6.5□□□□□ -1.37
ECHDC1-221ENST00000531582 CLSTN1O94985 981 aa6.5□□□□□ -1.37
ECHDC1-221ENST00000531582 NNTQ13423 1086 aa6.5□□□□□ -1.37
ECHDC1-221ENST00000531582 TRIM67Q6ZTA4 783 aa6.5□□□□□ -1.37
ECHDC1-221ENST00000531582 TRIM50Q86XT4 487 aa6.5□□□□□ -1.37
ECHDC1-221ENST00000531582 UCN2Q96RP3 112 aa6.5□□□□□ -1.37
ECHDC1-221ENST00000531582 C1orf115Q9H7X2 142 aa6.5□□□□□ -1.37
ECHDC1-221ENST00000531582 NOD1Q9Y239 953 aa6.5□□□□□ -1.37
ECHDC1-221ENST00000531582 RBM19Q9Y4C8 960 aaKnown RBP6.5□□□□□ -1.37
ECHDC1-221ENST00000531582 PCDHB11Q9Y5F2 797 aa6.5□□□□□ -1.37
ECHDC1-221ENST00000531582 USP17L5A8MUK1 530 aa6.49□□□□□ -1.37
ECHDC1-221ENST00000531582 ATP5J2-PTCD1G3V325 749 aa6.49□□□□□ -1.37
ECHDC1-221ENST00000531582 ERVH48-1M5A8F1 160 aa6.49□□□□□ -1.37
ECHDC1-221ENST00000531582 DGAT1O75907 488 aa6.49□□□□□ -1.37
ECHDC1-221ENST00000531582 ATP1A2P50993 1020 aa6.49□□□□□ -1.37
ECHDC1-221ENST00000531582 TRAF7Q6Q0C0 670 aa6.49□□□□□ -1.37
ECHDC1-221ENST00000531582 TBC1D9Q6ZT07 1266 aa6.49□□□□□ -1.37
ECHDC1-221ENST00000531582 TICAM2Q86XR7 235 aa6.49□□□□□ -1.37
ECHDC1-221ENST00000531582 PUS7Q96PZ0 661 aaKnown RBP6.49□□□□□ -1.37
ECHDC1-221ENST00000531582 J3QL48 77 aa6.48□□□□□ -1.37
ECHDC1-221ENST00000531582 SMPD1P17405 629 aa6.48□□□□□ -1.37
ECHDC1-221ENST00000531582 LMOD1P29536 600 aaPredicted RBP6.48□□□□□ -1.37
ECHDC1-221ENST00000531582 RAB15P59190 212 aa6.48□□□□□ -1.37
ECHDC1-221ENST00000531582 PPP1R26Q5T8A7 1209 aaPredicted RBP6.48□□□□□ -1.37
ECHDC1-221ENST00000531582 CC2D2BQ6DHV5 1058 aa6.48□□□□□ -1.37
ECHDC1-221ENST00000531582 CCDC85AQ96PX6 553 aaPredicted RBP6.48□□□□□ -1.37
ECHDC1-221ENST00000531582 VRTNQ9H8Y1 702 aa6.48□□□□□ -1.37
ECHDC1-221ENST00000531582 MAFBQ9Y5Q3 323 aaPredicted RBP6.48□□□□□ -1.37
ECHDC1-221ENST00000531582 USP17L3A6NCW0 530 aa6.47□□□□□ -1.37
ECHDC1-221ENST00000531582 USP17L4A6NCW7 530 aa6.47□□□□□ -1.37
ECHDC1-221ENST00000531582 PIK3CDO00329 1044 aa6.47□□□□□ -1.37
ECHDC1-221ENST00000531582 GFRA3O60609 400 aa6.47□□□□□ -1.37
ECHDC1-221ENST00000531582 ERVK-9P63128 1117 aa6.47□□□□□ -1.37
ECHDC1-221ENST00000531582 CTC1Q2NKJ3 1217 aa6.47□□□□□ -1.37
ECHDC1-221ENST00000531582 CFAP70Q5T0N1 1121 aa6.47□□□□□ -1.37
ECHDC1-221ENST00000531582 USP17L2Q6R6M4 530 aa6.47□□□□□ -1.37
ECHDC1-221ENST00000531582 USP17L1Q7RTZ2 530 aa6.47□□□□□ -1.37
ECHDC1-221ENST00000531582 FTSJ3Q8IY81 847 aaKnown RBP6.47□□□□□ -1.37
ECHDC1-221ENST00000531582 PBXIP1Q96AQ6 731 aa6.47□□□□□ -1.37
ECHDC1-221ENST00000531582 AVPP01185 164 aa6.46□□□□□ -1.38
ECHDC1-221ENST00000531582 NR3C2P08235 984 aa6.46□□□□□ -1.38
ECHDC1-221ENST00000531582 NCOA4Q13772 614 aa6.46□□□□□ -1.38
ECHDC1-221ENST00000531582 PKDCCQ504Y2 493 aa6.46□□□□□ -1.38
ECHDC1-221ENST00000531582 OXLD1Q5BKU9 147 aa6.46□□□□□ -1.38
ECHDC1-221ENST00000531582 POLR3GLQ9BT43 218 aa6.46□□□□□ -1.38
ECHDC1-221ENST00000531582 CENPJQ9HC77 1338 aaPredicted RBP6.46□□□□□ -1.38
ECHDC1-221ENST00000531582 FAM187AA6NFU0 413 aa6.45□□□□□ -1.38
ECHDC1-221ENST00000531582 ZIC2O95409 532 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-221ENST00000531582 NEFMP07197 916 aa6.45□□□□□ -1.38
ECHDC1-221ENST00000531582 WDR4P57081 412 aaKnown RBP6.45□□□□□ -1.38
ECHDC1-221ENST00000531582 CNGB1Q14028 1251 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-221ENST00000531582 LARP1Q6PKG0 1096 aaKnown RBP6.45□□□□□ -1.38
ECHDC1-221ENST00000531582 CYP2U1Q7Z449 544 aa6.45□□□□□ -1.38
ECHDC1-221ENST00000531582 IRX2Q9BZI1 471 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-221ENST00000531582 MKRN1Q9UHC7 482 aaKnown RBP6.45□□□□□ -1.38
ECHDC1-221ENST00000531582 RFX1P22670 979 aa6.44□□□□□ -1.38
ECHDC1-221ENST00000531582 SMCPP49901 116 aaPredicted RBP6.44□□□□□ -1.38
ECHDC1-221ENST00000531582 CALD1Q05682 793 aaKnown RBP6.44□□□□□ -1.38
ECHDC1-221ENST00000531582 LARGE2Q8N3Y3 721 aa6.44□□□□□ -1.38
ECHDC1-221ENST00000531582 ZNF784Q8NCA9 323 aaPredicted RBP6.44□□□□□ -1.38
ECHDC1-221ENST00000531582 KLF16Q9BXK1 252 aaPredicted RBP6.44□□□□□ -1.38
ECHDC1-221ENST00000531582 TMPRSS4Q9NRS4 437 aa6.44□□□□□ -1.38
ECHDC1-221ENST00000531582 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.44□□□□□ -1.38
ECHDC1-221ENST00000531582 FAM196BA6NMK8 535 aa6.43□□□□□ -1.38
ECHDC1-221ENST00000531582 CAPN5O15484 640 aaPredicted RBP6.43□□□□□ -1.38
ECHDC1-221ENST00000531582 UPP2O95045 317 aa6.43□□□□□ -1.38
ECHDC1-221ENST00000531582 GNRH1P01148 92 aa6.43□□□□□ -1.38
ECHDC1-221ENST00000531582 TIMP2P16035 220 aa6.43□□□□□ -1.38
ECHDC1-221ENST00000531582 CANXP27824 592 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-221ENST00000531582 ELOAQ14241 798 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-221ENST00000531582 TSGA10IPQ3SY00 556 aa6.43□□□□□ -1.38
ECHDC1-221ENST00000531582 ESCO1Q5FWF5 840 aa6.43□□□□□ -1.38
ECHDC1-221ENST00000531582 Q6ZVU0 165 aa6.43□□□□□ -1.38
ECHDC1-221ENST00000531582 HPS1Q92902 700 aa6.43□□□□□ -1.38
ECHDC1-221ENST00000531582 CDCA7Q9BWT1 371 aaPredicted RBP6.43□□□□□ -1.38
ECHDC1-221ENST00000531582 LILRA1O75019 489 aa6.42□□□□□ -1.38
ECHDC1-221ENST00000531582 ATG7O95352 703 aa6.42□□□□□ -1.38
ECHDC1-221ENST00000531582 PTMAP06454 111 aaKnown RBP6.42□□□□□ -1.38
ECHDC1-221ENST00000531582 ADH1AP07327 375 aa6.42□□□□□ -1.38
ECHDC1-221ENST00000531582 RASA1P20936 1047 aa6.42□□□□□ -1.38
ECHDC1-221ENST00000531582 MCCP23508 829 aa6.42□□□□□ -1.38
ECHDC1-221ENST00000531582 GTF2IP78347 998 aa6.42□□□□□ -1.38
ECHDC1-221ENST00000531582 SETQ01105 290 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-221ENST00000531582 KANK4Q5T7N3 995 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-221ENST00000531582 CRIPAKQ8N1N5 446 aa6.42□□□□□ -1.38
ECHDC1-221ENST00000531582 DEPDC4Q8N2C3 294 aa6.42□□□□□ -1.38
ECHDC1-221ENST00000531582 ANP32BQ92688 251 aaKnown RBP6.42□□□□□ -1.38
ECHDC1-221ENST00000531582 ITPKCQ96DU7 683 aa6.42□□□□□ -1.38
ECHDC1-221ENST00000531582 TSEN34Q9BSV6 310 aaKnown RBP6.42□□□□□ -1.38
ECHDC1-221ENST00000531582 CYLDQ9NQC7 956 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms