RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 MYO5BQ9ULV0 1848 aa10.53□□□□□ -0.72
TRIM53CP-201ENST00000531490 EP400Q96L91 3159 aa10.53□□□□□ -0.72
TRIM53CP-201ENST00000531490 DCCP43146 1447 aa10.53□□□□□ -0.72
TRIM53CP-201ENST00000531490 TRPM2O94759 1503 aa10.53□□□□□ -0.72
TRIM53CP-201ENST00000531490 BCAMP50895 628 aa10.52□□□□□ -0.72
TRIM53CP-201ENST00000531490 SETBP1Q9Y6X0 1596 aa10.52□□□□□ -0.73
TRIM53CP-201ENST00000531490 NUP155O75694 1391 aa10.52□□□□□ -0.73
TRIM53CP-201ENST00000531490 SOWAHBA6NEL2 793 aa10.52□□□□□ -0.73
TRIM53CP-201ENST00000531490 HIC1Q14526 733 aa10.52□□□□□ -0.73
TRIM53CP-201ENST00000531490 TRPC5Q9UL62 973 aaPredicted RBP10.52□□□□□ -0.73
TRIM53CP-201ENST00000531490 TULP1O00294 542 aaPredicted RBP10.51□□□□□ -0.73
TRIM53CP-201ENST00000531490 GPIHBP1Q8IV16 184 aa10.51□□□□□ -0.73
TRIM53CP-201ENST00000531490 FNBP4Q8N3X1 1017 aaPredicted RBP10.51□□□□□ -0.73
TRIM53CP-201ENST00000531490 EYA1Q99502 592 aa10.51□□□□□ -0.73
TRIM53CP-201ENST00000531490 ADGRL3Q9HAR2 1447 aa10.5□□□□□ -0.73
TRIM53CP-201ENST00000531490 UNC13BO14795 1591 aa10.5□□□□□ -0.73
TRIM53CP-201ENST00000531490 C1orf167Q5SNV9 1468 aa10.5□□□□□ -0.73
TRIM53CP-201ENST00000531490 ADGRG1Q9Y653 693 aa10.5□□□□□ -0.73
TRIM53CP-201ENST00000531490 SOS2Q07890 1332 aaPredicted RBP10.49□□□□□ -0.73
TRIM53CP-201ENST00000531490 GNPATO15228 680 aa10.49□□□□□ -0.73
TRIM53CP-201ENST00000531490 FECHP22830 423 aa10.49□□□□□ -0.73
TRIM53CP-201ENST00000531490 XPCQ01831 940 aaPredicted RBP10.49□□□□□ -0.73
TRIM53CP-201ENST00000531490 FAM161AQ3B820 660 aa10.49□□□□□ -0.73
TRIM53CP-201ENST00000531490 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.49□□□□□ -0.73
TRIM53CP-201ENST00000531490 ATRNO75882 1429 aa10.49□□□□□ -0.73
TRIM53CP-201ENST00000531490 NRXN3Q9Y4C0 1643 aa10.48□□□□□ -0.73
TRIM53CP-201ENST00000531490 ROBO2Q9HCK4 1378 aa10.48□□□□□ -0.73
TRIM53CP-201ENST00000531490 NAIPQ13075 1403 aa10.48□□□□□ -0.73
TRIM53CP-201ENST00000531490 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.48□□□□□ -0.73
TRIM53CP-201ENST00000531490 SAMD7Q7Z3H4 446 aa10.48□□□□□ -0.73
TRIM53CP-201ENST00000531490 LRCH3Q96II8 777 aa10.48□□□□□ -0.73
TRIM53CP-201ENST00000531490 NHSL1Q5SYE7 1610 aa10.48□□□□□ -0.73
TRIM53CP-201ENST00000531490 E9PCH4 1651 aa10.47□□□□□ -0.73
TRIM53CP-201ENST00000531490 XRN1Q8IZH2 1706 aaKnown RBP10.47□□□□□ -0.73
TRIM53CP-201ENST00000531490 DEFB132Q7Z7B7 95 aa10.47□□□□□ -0.73
TRIM53CP-201ENST00000531490 BCL9LQ86UU0 1499 aa10.45□□□□□ -0.74
TRIM53CP-201ENST00000531490 RBM46Q8TBY0 533 aaKnown RBP10.45□□□□□ -0.74
TRIM53CP-201ENST00000531490 WBP1LQ9NX94 342 aa10.45□□□□□ -0.74
TRIM53CP-201ENST00000531490 FOXO3O43524 673 aa10.44□□□□□ -0.74
TRIM53CP-201ENST00000531490 ESCO1Q5FWF5 840 aa10.44□□□□□ -0.74
TRIM53CP-201ENST00000531490 GJD4Q96KN9 370 aaPredicted RBP10.44□□□□□ -0.74
TRIM53CP-201ENST00000531490 HPS5Q9UPZ3 1129 aa10.44□□□□□ -0.74
TRIM53CP-201ENST00000531490 PTCH1Q13635 1447 aa10.44□□□□□ -0.74
TRIM53CP-201ENST00000531490 SWT1Q5T5J6 900 aaKnown RBP10.43□□□□□ -0.74
TRIM53CP-201ENST00000531490 TSR3Q9UJK0 312 aaKnown RBP10.43□□□□□ -0.74
TRIM53CP-201ENST00000531490 HFM1A2PYH4 1435 aa10.43□□□□□ -0.74
TRIM53CP-201ENST00000531490 IQGAP3Q86VI3 1631 aa10.43□□□□□ -0.74
TRIM53CP-201ENST00000531490 LMOD2Q6P5Q4 547 aa10.42□□□□□ -0.74
TRIM53CP-201ENST00000531490 CCDC125Q86Z20 511 aa10.42□□□□□ -0.74
TRIM53CP-201ENST00000531490 MYOM2P54296 1465 aa10.42□□□□□ -0.74
TRIM53CP-201ENST00000531490 NALCNQ8IZF0 1738 aa10.42□□□□□ -0.74
TRIM53CP-201ENST00000531490 RCCD1A6NED2 376 aa10.4□□□□□ -0.74
TRIM53CP-201ENST00000531490 OATP04181 439 aa10.4□□□□□ -0.74
TRIM53CP-201ENST00000531490 DNAJB2P25686 324 aa10.4□□□□□ -0.74
TRIM53CP-201ENST00000531490 PXYLP1Q8TE99 480 aa10.4□□□□□ -0.74
TRIM53CP-201ENST00000531490 NEXMIFQ5QGS0 1516 aa10.4□□□□□ -0.75
TRIM53CP-201ENST00000531490 NPHP3Q7Z494 1330 aa10.4□□□□□ -0.75
TRIM53CP-201ENST00000531490 PPP4CP60510 307 aa10.39□□□□□ -0.75
TRIM53CP-201ENST00000531490 WAPLQ7Z5K2 1190 aa10.39□□□□□ -0.75
TRIM53CP-201ENST00000531490 METTL3Q86U44 580 aaKnown RBP10.39□□□□□ -0.75
TRIM53CP-201ENST00000531490 UNC5CLQ8IV45 518 aa10.39□□□□□ -0.75
TRIM53CP-201ENST00000531490 SEPT12Q8IYM1 358 aa10.39□□□□□ -0.75
TRIM53CP-201ENST00000531490 RALGAPBQ86X10 1494 aa10.39□□□□□ -0.75
TRIM53CP-201ENST00000531490 BLMP54132 1417 aaPredicted RBP10.39□□□□□ -0.75
TRIM53CP-201ENST00000531490 NYAP1Q6ZVC0 841 aa10.39□□□□□ -0.75
TRIM53CP-201ENST00000531490 TMEM134Q9H6X4 195 aa10.39□□□□□ -0.75
TRIM53CP-201ENST00000531490 PLA2G2EQ9NZK7 142 aa10.39□□□□□ -0.75
TRIM53CP-201ENST00000531490 STK26Q9P289 416 aa10.39□□□□□ -0.75
TRIM53CP-201ENST00000531490 PXDNQ92626 1479 aa10.38□□□□□ -0.75
TRIM53CP-201ENST00000531490 RNF40O75150 1001 aa10.38□□□□□ -0.75
TRIM53CP-201ENST00000531490 CABLES1Q8TDN4 633 aa10.38□□□□□ -0.75
TRIM53CP-201ENST00000531490 LAMC1P11047 1609 aa10.37□□□□□ -0.75
TRIM53CP-201ENST00000531490 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.37□□□□□ -0.75
TRIM53CP-201ENST00000531490 MPHOSPH9Q99550 1183 aa10.37□□□□□ -0.75
TRIM53CP-201ENST00000531490 CLTCL1P53675 1640 aa10.36□□□□□ -0.75
TRIM53CP-201ENST00000531490 SF3B2Q13435 895 aaKnown RBP10.36□□□□□ -0.75
TRIM53CP-201ENST00000531490 SLF2Q8IX21 1173 aa10.36□□□□□ -0.75
TRIM53CP-201ENST00000531490 CCDC9Q9Y3X0 531 aaKnown RBP10.36□□□□□ -0.75
TRIM53CP-201ENST00000531490 PLEKHH1Q9ULM0 1364 aa10.35□□□□□ -0.75
TRIM53CP-201ENST00000531490 GLI3P10071 1580 aa10.35□□□□□ -0.75
TRIM53CP-201ENST00000531490 SPATA31A3Q5VYP0 1347 aa10.35□□□□□ -0.75
TRIM53CP-201ENST00000531490 SLIT2O94813 1529 aa10.35□□□□□ -0.75
TRIM53CP-201ENST00000531490 HRCP23327 699 aa10.35□□□□□ -0.75
TRIM53CP-201ENST00000531490 MAP2K5Q13163 448 aa10.35□□□□□ -0.75
TRIM53CP-201ENST00000531490 SPHKAPQ2M3C7 1700 aa10.34□□□□□ -0.75
TRIM53CP-201ENST00000531490 TMEM132EQ6IEE7 984 aa10.34□□□□□ -0.75
TRIM53CP-201ENST00000531490 PHOX2BQ99453 314 aa10.34□□□□□ -0.75
TRIM53CP-201ENST00000531490 COL22A1Q8NFW1 1626 aaPredicted RBP10.34□□□□□ -0.75
TRIM53CP-201ENST00000531490 RAB3GAP2Q9H2M9 1393 aa10.34□□□□□ -0.75
TRIM53CP-201ENST00000531490 ADGRF5Q8IZF2 1346 aa10.33□□□□□ -0.76
TRIM53CP-201ENST00000531490 VPS72Q15906 364 aa10.33□□□□□ -0.76
TRIM53CP-201ENST00000531490 FAM182BQ5T319 152 aa10.33□□□□□ -0.76
TRIM53CP-201ENST00000531490 KRT28Q7Z3Y7 464 aa10.33□□□□□ -0.76
TRIM53CP-201ENST00000531490 KRT27Q7Z3Y8 459 aa10.33□□□□□ -0.76
TRIM53CP-201ENST00000531490 PRAG1Q86YV5 1406 aa10.32□□□□□ -0.76
TRIM53CP-201ENST00000531490 A0A0G2JS52 829 aa10.32□□□□□ -0.76
TRIM53CP-201ENST00000531490 IRF6O14896 467 aa10.32□□□□□ -0.76
TRIM53CP-201ENST00000531490 MYT1Q01538 1121 aa10.32□□□□□ -0.76
TRIM53CP-201ENST00000531490 ZC3H15Q8WU90 426 aaKnown RBP10.32□□□□□ -0.76
TRIM53CP-201ENST00000531490 NLRP7Q8WX94 980 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms