RNA–Protein interactions for RNA: ENST00000531473.5

TSTA3-214, Transcript of tissue specific transplantation antigen P35B, humanhuman

TSL 1 (best)

Gene TSTA3, Length 2,220 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSTA3-214ENST00000531473 CHRNA2Q15822 529 aa25.83■■□□□ 1.72
TSTA3-214ENST00000531473 MCM10Q7L590 875 aa25.83■■□□□ 1.72
TSTA3-214ENST00000531473 EXOSC9Q06265 439 aaKnown RBP25.82■■□□□ 1.72
TSTA3-214ENST00000531473 LTBP4Q8N2S1 1624 aa25.81■■□□□ 1.72
TSTA3-214ENST00000531473 PHRF1Q9P1Y6 1649 aaKnown RBP25.81■■□□□ 1.72
TSTA3-214ENST00000531473 SOS2Q07890 1332 aaPredicted RBP25.8■■□□□ 1.72
TSTA3-214ENST00000531473 MYH16Q9H6N6 1097 aa25.8■■□□□ 1.72
TSTA3-214ENST00000531473 ANKRD24Q8TF21 1146 aa25.79■■□□□ 1.72
TSTA3-214ENST00000531473 FRAT1Q92837 279 aaPredicted RBP25.78■■□□□ 1.72
TSTA3-214ENST00000531473 CRYBG1Q9Y4K1 1723 aa25.77■■□□□ 1.72
TSTA3-214ENST00000531473 DAXXQ9UER7 740 aaPredicted RBP25.76■■□□□ 1.71
TSTA3-214ENST00000531473 RARSP54136 660 aaKnown RBP25.75■■□□□ 1.71
TSTA3-214ENST00000531473 IL16Q14005 1332 aa25.75■■□□□ 1.71
TSTA3-214ENST00000531473 KIAA0232Q92628 1395 aa25.75■■□□□ 1.71
TSTA3-214ENST00000531473 FAM43AQ8N2R8 423 aa25.75■■□□□ 1.71
TSTA3-214ENST00000531473 TNNQ9UQP3 1299 aa25.75■■□□□ 1.71
TSTA3-214ENST00000531473 KDM2BQ8NHM5 1336 aa25.74■■□□□ 1.71
TSTA3-214ENST00000531473 MBIPQ9NS73 344 aa25.73■■□□□ 1.71
TSTA3-214ENST00000531473 CENPQQ7L2Z9 268 aaPredicted RBP25.73■■□□□ 1.71
TSTA3-214ENST00000531473 ELL2O00472 640 aaPredicted RBP25.72■■□□□ 1.71
TSTA3-214ENST00000531473 TSPYL6Q8N831 410 aa25.72■■□□□ 1.71
TSTA3-214ENST00000531473 MIS18AQ9NYP9 233 aa25.72■■□□□ 1.71
TSTA3-214ENST00000531473 ERBB3P21860 1342 aa25.71■■□□□ 1.71
TSTA3-214ENST00000531473 ZNF853P0CG23 659 aa25.71■■□□□ 1.71
TSTA3-214ENST00000531473 NHSL1Q5SYE7 1610 aa25.71■■□□□ 1.71
TSTA3-214ENST00000531473 COL18A1P39060 1754 aa25.71■■□□□ 1.71
TSTA3-214ENST00000531473 ROBO1Q9Y6N7 1651 aa25.7■■□□□ 1.7
TSTA3-214ENST00000531473 KRT24Q2M2I5 525 aa25.69■■□□□ 1.7
TSTA3-214ENST00000531473 LMOD3Q0VAK6 560 aa25.68■■□□□ 1.7
TSTA3-214ENST00000531473 IFT57Q9NWB7 429 aa25.68■■□□□ 1.7
TSTA3-214ENST00000531473 EIF5BO60841 1220 aaKnown RBP25.67■■□□□ 1.7
TSTA3-214ENST00000531473 CFAP44Q96MT7 982 aa25.67■■□□□ 1.7
TSTA3-214ENST00000531473 SKAP1Q86WV1 359 aa25.65■■□□□ 1.7
TSTA3-214ENST00000531473 C8orf58Q8NAV2 365 aa25.65■■□□□ 1.7
TSTA3-214ENST00000531473 SSH1Q8WYL5 1049 aa25.65■■□□□ 1.7
TSTA3-214ENST00000531473 CRB1P82279 1406 aa25.65■■□□□ 1.7
TSTA3-214ENST00000531473 GNAI1P63096 354 aa25.65■■□□□ 1.7
TSTA3-214ENST00000531473 GAS2L2Q8NHY3 880 aa25.65■■□□□ 1.7
TSTA3-214ENST00000531473 PANK1Q8TE04 598 aa25.65■■□□□ 1.7
TSTA3-214ENST00000531473 NLRP2Q9NX02 1062 aa25.65■■□□□ 1.7
TSTA3-214ENST00000531473 IL17REQ8NFR9 667 aa25.64■■□□□ 1.69
TSTA3-214ENST00000531473 HAP1P54257 671 aaPredicted RBP25.63■■□□□ 1.69
TSTA3-214ENST00000531473 CANXP27824 592 aaKnown RBP25.63■■□□□ 1.69
TSTA3-214ENST00000531473 PDE3AQ14432 1141 aa25.63■■□□□ 1.69
TSTA3-214ENST00000531473 ABCA3Q99758 1704 aa25.62■■□□□ 1.69
TSTA3-214ENST00000531473 RTF1Q92541 710 aaKnown RBP25.62■■□□□ 1.69
TSTA3-214ENST00000531473 PRDM11Q9NQV5 511 aa25.62■■□□□ 1.69
TSTA3-214ENST00000531473 GNAT3A8MTJ3 354 aa25.61■■□□□ 1.69
TSTA3-214ENST00000531473 CSB-PGBD3P0DP91 1061 aa25.61■■□□□ 1.69
TSTA3-214ENST00000531473 RLBP1P12271 317 aa25.61■■□□□ 1.69
TSTA3-214ENST00000531473 PIP4K2BP78356 416 aa25.61■■□□□ 1.69
TSTA3-214ENST00000531473 FAM161AQ3B820 660 aa25.61■■□□□ 1.69
TSTA3-214ENST00000531473 CLUAP1Q96AJ1 413 aa25.61■■□□□ 1.69
TSTA3-214ENST00000531473 NCAPD2Q15021 1401 aa25.61■■□□□ 1.69
TSTA3-214ENST00000531473 CALD1Q05682 793 aaKnown RBP25.61■■□□□ 1.69
TSTA3-214ENST00000531473 SMC4Q9NTJ3 1288 aa25.61■■□□□ 1.69
TSTA3-214ENST00000531473 CPDO75976 1380 aa25.6■■□□□ 1.69
TSTA3-214ENST00000531473 CHL1O00533 1208 aa25.6■■□□□ 1.69
TSTA3-214ENST00000531473 VAMP4O75379 141 aa25.6■■□□□ 1.69
TSTA3-214ENST00000531473 LGR6Q9HBX8 967 aa25.6■■□□□ 1.69
TSTA3-214ENST00000531473 CAMTA1Q9Y6Y1 1673 aa25.6■■□□□ 1.69
TSTA3-214ENST00000531473 MAP3K5Q99683 1374 aa25.59■■□□□ 1.69
TSTA3-214ENST00000531473 LMO7Q8WWI1 1683 aa25.58■■□□□ 1.69
TSTA3-214ENST00000531473 COG6Q9Y2V7 657 aa25.57■■□□□ 1.68
TSTA3-214ENST00000531473 ZNF530Q6P9A1 599 aaPredicted RBP25.57■■□□□ 1.68
TSTA3-214ENST00000531473 FAM208AQ9UK61 1670 aaKnown RBP25.57■■□□□ 1.68
TSTA3-214ENST00000531473 SLC4A3P48751 1232 aa25.56■■□□□ 1.68
TSTA3-214ENST00000531473 TWISTNBQ3B726 338 aaPredicted RBP25.56■■□□□ 1.68
TSTA3-214ENST00000531473 MPRIPQ6WCQ1 1025 aa25.56■■□□□ 1.68
TSTA3-214ENST00000531473 MEGF6O75095 1541 aa25.55■■□□□ 1.68
TSTA3-214ENST00000531473 NOB1Q9ULX3 412 aaKnown RBP25.54■■□□□ 1.68
TSTA3-214ENST00000531473 TSPYL4Q9UJ04 414 aa25.53■■□□□ 1.68
TSTA3-214ENST00000531473 LRRC37A3O60309 1634 aa25.53■■□□□ 1.68
TSTA3-214ENST00000531473 CT47B1P0C2W7 299 aaPredicted RBP25.53■■□□□ 1.68
TSTA3-214ENST00000531473 C8orf34Q49A92 452 aa25.53■■□□□ 1.68
TSTA3-214ENST00000531473 FRAT2O75474 233 aaPredicted RBP25.52■■□□□ 1.68
TSTA3-214ENST00000531473 STRN4Q9NRL3 753 aa25.52■■□□□ 1.68
TSTA3-214ENST00000531473 PLEKHO1Q53GL0 409 aaPredicted RBP25.51■■□□□ 1.67
TSTA3-214ENST00000531473 AHDC1Q5TGY3 1603 aaPredicted RBP25.51■■□□□ 1.67
TSTA3-214ENST00000531473 TRIM27P14373 513 aa25.51■■□□□ 1.67
TSTA3-214ENST00000531473 COL5A2P05997 1499 aaPredicted RBP25.5■■□□□ 1.67
TSTA3-214ENST00000531473 HTATSF1O43719 755 aaKnown RBP25.49■■□□□ 1.67
TSTA3-214ENST00000531473 LARP1Q6PKG0 1096 aaKnown RBP25.49■■□□□ 1.67
TSTA3-214ENST00000531473 RAPGEF4Q8WZA2 1011 aa25.48■■□□□ 1.67
TSTA3-214ENST00000531473 CEMIPQ8WUJ3 1361 aa25.48■■□□□ 1.67
TSTA3-214ENST00000531473 AKAP4Q5JQC9 854 aa25.48■■□□□ 1.67
TSTA3-214ENST00000531473 AEBP2Q6ZN18 517 aaPredicted RBP25.48■■□□□ 1.67
TSTA3-214ENST00000531473 TOM1L2Q6ZVM7 507 aa25.48■■□□□ 1.67
TSTA3-214ENST00000531473 KCNQ3O43525 872 aa25.47■■□□□ 1.67
TSTA3-214ENST00000531473 MRPL50Q8N5N7 158 aaKnown RBP25.47■■□□□ 1.67
TSTA3-214ENST00000531473 RGS3P49796 1198 aa25.47■■□□□ 1.67
TSTA3-214ENST00000531473 ZKSCAN2Q63HK3 967 aa25.47■■□□□ 1.67
TSTA3-214ENST00000531473 WDR17Q8IZU2 1322 aa25.46■■□□□ 1.67
TSTA3-214ENST00000531473 AMOTQ4VCS5 1084 aa25.46■■□□□ 1.67
TSTA3-214ENST00000531473 VIRMAQ69YN4 1812 aaKnown RBP25.46■■□□□ 1.67
TSTA3-214ENST00000531473 PHLPP1O60346 1717 aa25.46■■□□□ 1.67
TSTA3-214ENST00000531473 UBAP1LF5GYI3 381 aa25.45■■□□□ 1.67
TSTA3-214ENST00000531473 IGHDP01880 384 aa25.45■■□□□ 1.67
TSTA3-214ENST00000531473 AAMPQ13685 434 aa25.45■■□□□ 1.66
TSTA3-214ENST00000531473 ALDH1L2Q3SY69 923 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms