RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 TNFRSF10AO00220 468 aa7.59□□□□□ -1.19
PCF11-205ENST00000530906 RDH13Q8NBN7 331 aa7.59□□□□□ -1.19
PCF11-205ENST00000530906 EIF3AQ14152 1382 aaKnown RBP7.59□□□□□ -1.2
PCF11-205ENST00000530906 ATP6V1AP38606 617 aa7.58□□□□□ -1.2
PCF11-205ENST00000530906 GCGRP47871 477 aa7.58□□□□□ -1.2
PCF11-205ENST00000530906 CDCA8Q53HL2 280 aa7.58□□□□□ -1.2
PCF11-205ENST00000530906 FAM160A2Q8N612 972 aaPredicted RBP7.58□□□□□ -1.2
PCF11-205ENST00000530906 ZNF775Q96BV0 537 aaPredicted RBP7.58□□□□□ -1.2
PCF11-205ENST00000530906 PKD2L1Q9P0L9 805 aa7.58□□□□□ -1.2
PCF11-205ENST00000530906 IFT172Q9UG01 1749 aa7.58□□□□□ -1.2
PCF11-205ENST00000530906 INSRP06213 1382 aa7.58□□□□□ -1.2
PCF11-205ENST00000530906 ZMYM4Q5VZL5 1548 aa7.57□□□□□ -1.2
PCF11-205ENST00000530906 PPRC1Q5VV67 1664 aaKnown RBP7.57□□□□□ -1.2
PCF11-205ENST00000530906 SCAF11Q99590 1463 aaKnown RBP7.57□□□□□ -1.2
PCF11-205ENST00000530906 ST20-MTHFSA0A0A6YYL1 179 aa7.57□□□□□ -1.2
PCF11-205ENST00000530906 KIF3BO15066 747 aa7.57□□□□□ -1.2
PCF11-205ENST00000530906 RALBP1Q15311 655 aa7.57□□□□□ -1.2
PCF11-205ENST00000530906 KDM2AQ9Y2K7 1162 aa7.57□□□□□ -1.2
PCF11-205ENST00000530906 SLC27A5Q9Y2P5 690 aa7.57□□□□□ -1.2
PCF11-205ENST00000530906 ARHGAP31Q2M1Z3 1444 aa7.57□□□□□ -1.2
PCF11-205ENST00000530906 FRMPD1Q5SYB0 1578 aa7.57□□□□□ -1.2
PCF11-205ENST00000530906 RICTORQ6R327 1708 aa7.57□□□□□ -1.2
PCF11-205ENST00000530906 ABCA6Q8N139 1617 aa7.56□□□□□ -1.2
PCF11-205ENST00000530906 NRXN1Q9ULB1 1477 aa7.56□□□□□ -1.2
PCF11-205ENST00000530906 REREQ9P2R6 1566 aa7.56□□□□□ -1.2
PCF11-205ENST00000530906 SETBP1Q9Y6X0 1596 aa7.56□□□□□ -1.2
PCF11-205ENST00000530906 FAM187AA6NFU0 413 aa7.56□□□□□ -1.2
PCF11-205ENST00000530906 POTECB2RU33 542 aa7.56□□□□□ -1.2
PCF11-205ENST00000530906 NEFLP07196 543 aa7.56□□□□□ -1.2
PCF11-205ENST00000530906 SALL2Q9Y467 1007 aaPredicted RBP7.56□□□□□ -1.2
PCF11-205ENST00000530906 ADGRB3O60242 1522 aa7.56□□□□□ -1.2
PCF11-205ENST00000530906 BRD4O60885 1362 aaPredicted RBP7.56□□□□□ -1.2
PCF11-205ENST00000530906 ZBED9Q6R2W3 1325 aa7.55□□□□□ -1.2
PCF11-205ENST00000530906 DIP2CQ9Y2E4 1556 aa7.55□□□□□ -1.2
PCF11-205ENST00000530906 RPIAP49247 311 aa7.55□□□□□ -1.2
PCF11-205ENST00000530906 TMF1P82094 1093 aa7.55□□□□□ -1.2
PCF11-205ENST00000530906 ERICH6BQ5W0A0 696 aa7.55□□□□□ -1.2
PCF11-205ENST00000530906 LMOD2Q6P5Q4 547 aa7.55□□□□□ -1.2
PCF11-205ENST00000530906 SULF1Q8IWU6 871 aa7.55□□□□□ -1.2
PCF11-205ENST00000530906 MRS2Q9HD23 443 aa7.55□□□□□ -1.2
PCF11-205ENST00000530906 FCF1Q9Y324 198 aaKnown RBP7.55□□□□□ -1.2
PCF11-205ENST00000530906 ABCC3O15438 1527 aa7.55□□□□□ -1.2
PCF11-205ENST00000530906 CAMSAP1Q5T5Y3 1602 aa7.55□□□□□ -1.2
PCF11-205ENST00000530906 SBNO2Q9Y2G9 1366 aa7.55□□□□□ -1.2
PCF11-205ENST00000530906 RPGRIP1LQ68CZ1 1315 aa7.54□□□□□ -1.2
PCF11-205ENST00000530906 MYO3AQ8NEV4 1616 aa7.54□□□□□ -1.2
PCF11-205ENST00000530906 FMNL1O95466 1100 aaPredicted RBP7.54□□□□□ -1.2
PCF11-205ENST00000530906 RGL3Q3MIN7 710 aa7.54□□□□□ -1.2
PCF11-205ENST00000530906 BRICD5Q6PL45 260 aa7.54□□□□□ -1.2
PCF11-205ENST00000530906 GPIHBP1Q8IV16 184 aa7.54□□□□□ -1.2
PCF11-205ENST00000530906 TESK2Q96S53 571 aa7.54□□□□□ -1.2
PCF11-205ENST00000530906 SUPT16HQ9Y5B9 1047 aaKnown RBP7.54□□□□□ -1.2
PCF11-205ENST00000530906 SYNMO15061 1565 aa7.54□□□□□ -1.2
PCF11-205ENST00000530906 MYBBP1AQ9BQG0 1328 aaKnown RBP7.53□□□□□ -1.2
PCF11-205ENST00000530906 RIMBP3CA6NJZ7 1639 aa7.53□□□□□ -1.2
PCF11-205ENST00000530906 RIMBP3BA6NNM3 1639 aa7.53□□□□□ -1.2
PCF11-205ENST00000530906 PIK3C2BO00750 1634 aa7.53□□□□□ -1.2
PCF11-205ENST00000530906 RIMBP3Q9UFD9 1639 aa7.53□□□□□ -1.2
PCF11-205ENST00000530906 HNRNPUQ00839 825 aaKnown RBP eCLIP7.53□□□□□ -1.2
PCF11-205ENST00000530906 PRDM9Q9NQV7 894 aa7.53□□□□□ -1.2
PCF11-205ENST00000530906 DIP2BQ9P265 1576 aa7.53□□□□□ -1.2
PCF11-205ENST00000530906 NOS1P29475 1434 aa7.52□□□□□ -1.2
PCF11-205ENST00000530906 NPATQ14207 1427 aa7.52□□□□□ -1.2
PCF11-205ENST00000530906 PPLO60437 1756 aa7.52□□□□□ -1.21
PCF11-205ENST00000530906 PARD3Q8TEW0 1356 aa7.52□□□□□ -1.21
PCF11-205ENST00000530906 NPC1L1Q9UHC9 1359 aa7.52□□□□□ -1.21
PCF11-205ENST00000530906 ST8SIA5O15466 376 aa7.52□□□□□ -1.21
PCF11-205ENST00000530906 FOXC1Q12948 553 aa7.52□□□□□ -1.21
PCF11-205ENST00000530906 AAASQ9NRG9 546 aa7.52□□□□□ -1.21
PCF11-205ENST00000530906 AGLP35573 1532 aa7.52□□□□□ -1.21
PCF11-205ENST00000530906 KDM5AP29375 1690 aaKnown RBP7.51□□□□□ -1.21
PCF11-205ENST00000530906 LRPPRCP42704 1394 aaKnown RBP7.51□□□□□ -1.21
PCF11-205ENST00000530906 CD2BP2O95400 341 aaKnown RBP7.51□□□□□ -1.21
PCF11-205ENST00000530906 NBPF1Q3BBV0 1214 aa7.51□□□□□ -1.21
PCF11-205ENST00000530906 RNF19BQ6ZMZ0 732 aa7.51□□□□□ -1.21
PCF11-205ENST00000530906 NLRP13Q86W25 1043 aa7.51□□□□□ -1.21
PCF11-205ENST00000530906 TOR4AQ9NXH8 423 aa7.51□□□□□ -1.21
PCF11-205ENST00000530906 ZFYVE9O95405 1425 aa7.51□□□□□ -1.21
PCF11-205ENST00000530906 MSS51Q4VC12 460 aa7.5□□□□□ -1.21
PCF11-205ENST00000530906 MROH2AA6NES4 1674 aa7.5□□□□□ -1.21
PCF11-205ENST00000530906 DISP3Q9P2K9 1392 aa7.49□□□□□ -1.21
PCF11-205ENST00000530906 CD46P15529 392 aa7.49□□□□□ -1.21
PCF11-205ENST00000530906 CRIPAKQ8N1N5 446 aa7.49□□□□□ -1.21
PCF11-205ENST00000530906 TMC1Q8TDI8 760 aa7.49□□□□□ -1.21
PCF11-205ENST00000530906 PIK3C2GO75747 1445 aa7.49□□□□□ -1.21
PCF11-205ENST00000530906 PER1O15534 1290 aaPredicted RBP7.48□□□□□ -1.21
PCF11-205ENST00000530906 AVPP01185 164 aa7.48□□□□□ -1.21
PCF11-205ENST00000530906 HAP1P54257 671 aaPredicted RBP7.48□□□□□ -1.21
PCF11-205ENST00000530906 MAP2K5Q13163 448 aa7.48□□□□□ -1.21
PCF11-205ENST00000530906 SMG6Q86US8 1419 aaKnown RBP7.48□□□□□ -1.21
PCF11-205ENST00000530906 PNISRQ8TF01 805 aaKnown RBP7.48□□□□□ -1.21
PCF11-205ENST00000530906 PUS7Q96PZ0 661 aaKnown RBP7.48□□□□□ -1.21
PCF11-205ENST00000530906 SLC52A1Q9NWF4 448 aa7.48□□□□□ -1.21
PCF11-205ENST00000530906 UGGT1Q9NYU2 1555 aa7.47□□□□□ -1.21
PCF11-205ENST00000530906 MMP16P51512 607 aa7.47□□□□□ -1.21
PCF11-205ENST00000530906 GRIPAP1Q4V328 841 aa7.47□□□□□ -1.21
PCF11-205ENST00000530906 FAM9BQ8IZU0 186 aa7.47□□□□□ -1.21
PCF11-205ENST00000530906 POLR3GLQ9BT43 218 aa7.47□□□□□ -1.21
PCF11-205ENST00000530906 MYOM1P52179 1685 aa7.47□□□□□ -1.21
PCF11-205ENST00000530906 PREX1Q8TCU6 1659 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms