RNA–Protein interactions for RNA: ENST00000530695.1

PKP3-207, Transcript of plakophilin 3, humanhuman

TSL 5

Gene PKP3, Length 441 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-207ENST00000530695 FLT4P35916 1363 aa23.61■■□□□ 1.37
PKP3-207ENST00000530695 HSP90AB2PQ58FF8 381 aa23.6■■□□□ 1.37
PKP3-207ENST00000530695 USHBP1Q8N6Y0 703 aa23.6■■□□□ 1.37
PKP3-207ENST00000530695 INSRP06213 1382 aa23.6■■□□□ 1.37
PKP3-207ENST00000530695 SYTL4Q96C24 671 aaPredicted RBP23.59■■□□□ 1.37
PKP3-207ENST00000530695 KIF24Q5T7B8 1368 aa23.59■■□□□ 1.37
PKP3-207ENST00000530695 PRIM1P49642 420 aaKnown RBP23.58■■□□□ 1.37
PKP3-207ENST00000530695 ATF5Q9Y2D1 282 aaPredicted RBP23.58■■□□□ 1.37
PKP3-207ENST00000530695 LY75O60449 1722 aa23.58■■□□□ 1.37
PKP3-207ENST00000530695 CGNL1Q0VF96 1302 aa23.58■■□□□ 1.36
PKP3-207ENST00000530695 ANKRD26Q9UPS8 1709 aa23.57■■□□□ 1.36
PKP3-207ENST00000530695 RAPGEF4Q8WZA2 1011 aa23.57■■□□□ 1.36
PKP3-207ENST00000530695 LRRC4BQ9NT99 713 aa23.57■■□□□ 1.36
PKP3-207ENST00000530695 POLR3GLQ9BT43 218 aa23.56■■□□□ 1.36
PKP3-207ENST00000530695 QSER1Q2KHR3 1735 aa23.56■■□□□ 1.36
PKP3-207ENST00000530695 PTGER2P43116 358 aa23.55■■□□□ 1.36
PKP3-207ENST00000530695 EMILIN1Q9Y6C2 1016 aa23.55■■□□□ 1.36
PKP3-207ENST00000530695 TATP17735 454 aaPredicted RBP23.54■■□□□ 1.36
PKP3-207ENST00000530695 ZNF827Q17R98 1081 aa23.54■■□□□ 1.36
PKP3-207ENST00000530695 SLC27A3Q5K4L6 730 aa23.54■■□□□ 1.36
PKP3-207ENST00000530695 CCER1Q8TC90 406 aaPredicted RBP23.54■■□□□ 1.36
PKP3-207ENST00000530695 MTFR1LQ9H019 292 aa23.54■■□□□ 1.36
PKP3-207ENST00000530695 NSD2O96028 1365 aa23.53■■□□□ 1.36
PKP3-207ENST00000530695 TUBGCP6Q96RT7 1819 aa23.53■■□□□ 1.36
PKP3-207ENST00000530695 PPM1GO15355 546 aaPredicted RBP23.52■■□□□ 1.36
PKP3-207ENST00000530695 DCAF8L1A6NGE4 600 aa23.51■■□□□ 1.35
PKP3-207ENST00000530695 EIF4G2P78344 907 aaKnown RBP eCLIP23.51■■□□□ 1.35
PKP3-207ENST00000530695 PCDH11XQ9BZA7 1347 aa23.5■■□□□ 1.35
PKP3-207ENST00000530695 PCDH11YQ9BZA8 1340 aa23.5■■□□□ 1.35
PKP3-207ENST00000530695 PKD1L3Q7Z443 1732 aa23.5■■□□□ 1.35
PKP3-207ENST00000530695 HSPA5P11021 654 aaKnown RBP23.49■■□□□ 1.35
PKP3-207ENST00000530695 KCNQ4P56696 695 aa23.49■■□□□ 1.35
PKP3-207ENST00000530695 AKT1S1Q96B36 256 aa23.49■■□□□ 1.35
PKP3-207ENST00000530695 ITGB4P16144 1822 aa23.49■■□□□ 1.35
PKP3-207ENST00000530695 SGIP1Q9BQI5 828 aa23.47■■□□□ 1.35
PKP3-207ENST00000530695 WASHC2AQ641Q2 1341 aa23.46■■□□□ 1.35
PKP3-207ENST00000530695 TOGARAM1Q9Y4F4 1720 aa23.45■■□□□ 1.34
PKP3-207ENST00000530695 NCAPD2Q15021 1401 aa23.45■■□□□ 1.34
PKP3-207ENST00000530695 FHDC1Q9C0D6 1143 aaPredicted RBP23.45■■□□□ 1.34
PKP3-207ENST00000530695 TFCP2L1Q9NZI6 479 aa23.45■■□□□ 1.34
PKP3-207ENST00000530695 CCNL1Q9UK58 526 aaPredicted RBP23.45■■□□□ 1.34
PKP3-207ENST00000530695 POLKQ9UBT6 870 aa23.44■■□□□ 1.34
PKP3-207ENST00000530695 COL24A1Q17RW2 1714 aa23.44■■□□□ 1.34
PKP3-207ENST00000530695 TAF1LQ8IZX4 1826 aa23.43■■□□□ 1.34
PKP3-207ENST00000530695 CYP27B1O15528 508 aa23.43■■□□□ 1.34
PKP3-207ENST00000530695 TNNT2P45379 298 aaPredicted RBP23.43■■□□□ 1.34
PKP3-207ENST00000530695 SYT17Q9BSW7 474 aa23.43■■□□□ 1.34
PKP3-207ENST00000530695 C5P01031 1676 aa23.43■■□□□ 1.34
PKP3-207ENST00000530695 PNPLA7Q6ZV29 1317 aa23.42■■□□□ 1.34
PKP3-207ENST00000530695 YY1P25490 414 aa23.42■■□□□ 1.34
PKP3-207ENST00000530695 ARXQ96QS3 562 aa23.42■■□□□ 1.34
PKP3-207ENST00000530695 PANK3Q9H999 370 aa23.42■■□□□ 1.34
PKP3-207ENST00000530695 SLC16A10Q8TF71 515 aa23.41■■□□□ 1.34
PKP3-207ENST00000530695 EYA1Q99502 592 aa23.41■■□□□ 1.34
PKP3-207ENST00000530695 MPRIPQ6WCQ1 1025 aa23.4■■□□□ 1.34
PKP3-207ENST00000530695 SPG7Q9UQ90 795 aa23.39■■□□□ 1.33
PKP3-207ENST00000530695 UTRNP46939 3433 aa23.38■■□□□ 1.33
PKP3-207ENST00000530695 CHD4Q14839 1912 aa23.37■■□□□ 1.33
PKP3-207ENST00000530695 PALLDQ8WX93 1383 aa23.37■■□□□ 1.33
PKP3-207ENST00000530695 POLD1P28340 1107 aa23.36■■□□□ 1.33
PKP3-207ENST00000530695 EIF4A2Q14240 407 aaKnown RBP23.36■■□□□ 1.33
PKP3-207ENST00000530695 NKX1-1Q15270 411 aaPredicted RBP23.35■■□□□ 1.33
PKP3-207ENST00000530695 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.35■■□□□ 1.33
PKP3-207ENST00000530695 MAP3K5Q99683 1374 aa23.35■■□□□ 1.33
PKP3-207ENST00000530695 MSH5O43196 834 aa23.33■■□□□ 1.33
PKP3-207ENST00000530695 HMGB2P26583 209 aaKnown RBP23.33■■□□□ 1.33
PKP3-207ENST00000530695 SMARCC1Q92922 1105 aaPredicted RBP23.33■■□□□ 1.33
PKP3-207ENST00000530695 PIGBQ92521 554 aa23.32■■□□□ 1.32
PKP3-207ENST00000530695 C4BP0C0L5 1744 aa23.32■■□□□ 1.32
PKP3-207ENST00000530695 COL23A1Q86Y22 540 aaPredicted RBP23.31■■□□□ 1.32
PKP3-207ENST00000530695 KLHL34Q8N239 644 aa23.31■■□□□ 1.32
PKP3-207ENST00000530695 MORC1Q86VD1 984 aa23.3■■□□□ 1.32
PKP3-207ENST00000530695 IFNL2Q8IZJ0 200 aa23.3■■□□□ 1.32
PKP3-207ENST00000530695 PHKG2P15735 406 aa23.29■■□□□ 1.32
PKP3-207ENST00000530695 UBR3Q6ZT12 1888 aa23.29■■□□□ 1.32
PKP3-207ENST00000530695 IGSF1Q8N6C5 1336 aa23.29■■□□□ 1.32
PKP3-207ENST00000530695 GOLGB1Q14789 3259 aaKnown RBP23.28■■□□□ 1.32
PKP3-207ENST00000530695 TMOD3Q9NYL9 352 aa23.28■■□□□ 1.32
PKP3-207ENST00000530695 KNSTRNQ9Y448 316 aa23.28■■□□□ 1.32
PKP3-207ENST00000530695 PLEKHG2Q9H7P9 1386 aa23.27■■□□□ 1.32
PKP3-207ENST00000530695 FLAD1Q8NFF5 587 aa23.25■■□□□ 1.31
PKP3-207ENST00000530695 MSL1Q68DK7 614 aa23.24■■□□□ 1.31
PKP3-207ENST00000530695 AK7Q96M32 723 aa23.24■■□□□ 1.31
PKP3-207ENST00000530695 LOC102724428A0A0B4J2F2 783 aa23.23■■□□□ 1.31
PKP3-207ENST00000530695 SIK1P57059 783 aa23.23■■□□□ 1.31
PKP3-207ENST00000530695 ASAP1Q9ULH1 1129 aa23.23■■□□□ 1.31
PKP3-207ENST00000530695 GPR162Q16538 588 aa23.22■■□□□ 1.31
PKP3-207ENST00000530695 KIF7Q2M1P5 1343 aa23.22■■□□□ 1.31
PKP3-207ENST00000530695 PLEKHO1Q53GL0 409 aaPredicted RBP23.21■■□□□ 1.31
PKP3-207ENST00000530695 LINC00116Q8NCU8 138 aa23.2■■□□□ 1.3
PKP3-207ENST00000530695 NLGN2Q8NFZ4 835 aa23.2■■□□□ 1.3
PKP3-207ENST00000530695 PHF14O94880 888 aa23.19■■□□□ 1.3
PKP3-207ENST00000530695 HSP90AB1P08238 724 aaKnown RBP23.19■■□□□ 1.3
PKP3-207ENST00000530695 AMER1Q5JTC6 1135 aaPredicted RBP23.19■■□□□ 1.3
PKP3-207ENST00000530695 AMIGO3Q86WK7 504 aa23.19■■□□□ 1.3
PKP3-207ENST00000530695 ATG3Q9NT62 314 aa23.19■■□□□ 1.3
PKP3-207ENST00000530695 ERVV-2B6SEH9 535 aa23.18■■□□□ 1.3
PKP3-207ENST00000530695 ATP6V1AP38606 617 aa23.18■■□□□ 1.3
PKP3-207ENST00000530695 AMOTQ4VCS5 1084 aa23.18■■□□□ 1.3
PKP3-207ENST00000530695 ZNF530Q6P9A1 599 aaPredicted RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms