RNA–Protein interactions for RNA: ENST00000530369.1

USP47-210, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-210ENST00000530369 USP17L5A8MUK1 530 aa6.83□□□□□ -1.32
USP47-210ENST00000530369 ATP9BO43861 1147 aa6.83□□□□□ -1.32
USP47-210ENST00000530369 LILRA1O75019 489 aa6.83□□□□□ -1.32
USP47-210ENST00000530369 RELBQ01201 579 aa6.83□□□□□ -1.32
USP47-210ENST00000530369 ESCO1Q5FWF5 840 aa6.83□□□□□ -1.32
USP47-210ENST00000530369 C6orf118Q5T5N4 469 aa6.83□□□□□ -1.32
USP47-210ENST00000530369 CCDC97Q96F63 343 aaPredicted RBP6.83□□□□□ -1.32
USP47-210ENST00000530369 PURBQ96QR8 312 aaKnown RBP6.83□□□□□ -1.32
USP47-210ENST00000530369 CHIC2Q9UKJ5 165 aa6.83□□□□□ -1.32
USP47-210ENST00000530369 C11orf95C9JLR9 678 aaPredicted RBP6.82□□□□□ -1.32
USP47-210ENST00000530369 GNRH1P01148 92 aa6.82□□□□□ -1.32
USP47-210ENST00000530369 PTGIRP43119 386 aa6.82□□□□□ -1.32
USP47-210ENST00000530369 ATP1A2P50993 1020 aa6.82□□□□□ -1.32
USP47-210ENST00000530369 PLEKHM2Q8IWE5 1019 aa6.82□□□□□ -1.32
USP47-210ENST00000530369 ADAMTS19Q8TE59 1207 aa6.82□□□□□ -1.32
USP47-210ENST00000530369 TRIM47Q96LD4 638 aa6.82□□□□□ -1.32
USP47-210ENST00000530369 NLRP3Q96P20 1036 aa6.82□□□□□ -1.32
USP47-210ENST00000530369 RBM19Q9Y4C8 960 aaKnown RBP6.82□□□□□ -1.32
USP47-210ENST00000530369 POTECB2RU33 542 aa6.81□□□□□ -1.32
USP47-210ENST00000530369 PIK3CDO00329 1044 aa6.81□□□□□ -1.32
USP47-210ENST00000530369 SPINT1O43278 529 aa6.81□□□□□ -1.32
USP47-210ENST00000530369 GTF2E1P29083 439 aaPredicted RBP6.81□□□□□ -1.32
USP47-210ENST00000530369 TRIM46Q7Z4K8 759 aa6.81□□□□□ -1.32
USP47-210ENST00000530369 ZFP42Q96MM3 310 aa6.81□□□□□ -1.32
USP47-210ENST00000530369 POLMQ9NP87 494 aaPredicted RBP6.81□□□□□ -1.32
USP47-210ENST00000530369 GMPR2Q9P2T1 348 aaKnown RBP6.81□□□□□ -1.32
USP47-210ENST00000530369 USP17L3A6NCW0 530 aa6.8□□□□□ -1.32
USP47-210ENST00000530369 USP17L4A6NCW7 530 aa6.8□□□□□ -1.32
USP47-210ENST00000530369 MAN1A2O60476 641 aa6.8□□□□□ -1.32
USP47-210ENST00000530369 SCTRP47872 440 aa6.8□□□□□ -1.32
USP47-210ENST00000530369 PSME1Q06323 249 aa6.8□□□□□ -1.32
USP47-210ENST00000530369 NCOA4Q13772 614 aa6.8□□□□□ -1.32
USP47-210ENST00000530369 USP17L2Q6R6M4 530 aa6.8□□□□□ -1.32
USP47-210ENST00000530369 USP17L1Q7RTZ2 530 aa6.8□□□□□ -1.32
USP47-210ENST00000530369 AGBL1Q96MI9 1066 aa6.8□□□□□ -1.32
USP47-210ENST00000530369 CDCA7Q9BWT1 371 aaPredicted RBP6.8□□□□□ -1.32
USP47-210ENST00000530369 PPP1R12CQ9BZL4 782 aa6.8□□□□□ -1.32
USP47-210ENST00000530369 OSBPL3Q9H4L5 887 aa6.8□□□□□ -1.32
USP47-210ENST00000530369 SERPINA10Q9UK55 444 aa6.8□□□□□ -1.32
USP47-210ENST00000530369 MYO15BQ96JP2 1530 aa6.8□□□□□ -1.32
USP47-210ENST00000530369 PALM3A6NDB9 673 aaPredicted RBP6.79□□□□□ -1.32
USP47-210ENST00000530369 TTLL8A6PVC2 850 aa6.79□□□□□ -1.32
USP47-210ENST00000530369 MEN1O00255 615 aa6.79□□□□□ -1.32
USP47-210ENST00000530369 GPC1P35052 558 aa6.79□□□□□ -1.32
USP47-210ENST00000530369 ADD1P35611 737 aaKnown RBP6.79□□□□□ -1.32
USP47-210ENST00000530369 TBC1D9Q6ZT07 1266 aa6.79□□□□□ -1.32
USP47-210ENST00000530369 UCN2Q96RP3 112 aa6.79□□□□□ -1.32
USP47-210ENST00000530369 GTF2IP78347 998 aa6.78□□□□□ -1.32
USP47-210ENST00000530369 CLN3Q13286 438 aa6.78□□□□□ -1.32
USP47-210ENST00000530369 ZNF395Q9H8N7 513 aaPredicted RBP6.78□□□□□ -1.32
USP47-210ENST00000530369 ARHGEF10LQ9HCE6 1279 aa6.78□□□□□ -1.32
USP47-210ENST00000530369 TFIP11Q9UBB9 837 aaKnown RBP6.78□□□□□ -1.32
USP47-210ENST00000530369 DACH1Q9UI36 760 aa6.78□□□□□ -1.32
USP47-210ENST00000530369 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.77□□□□□ -1.33
USP47-210ENST00000530369 DEPDC4Q8N2C3 294 aa6.77□□□□□ -1.33
USP47-210ENST00000530369 INSM2Q96T92 566 aaPredicted RBP6.77□□□□□ -1.33
USP47-210ENST00000530369 MAFBQ9Y5Q3 323 aaPredicted RBP6.77□□□□□ -1.33
USP47-210ENST00000530369 A0A1W2PRU2 124 aa6.76□□□□□ -1.33
USP47-210ENST00000530369 LMOD1P29536 600 aaPredicted RBP6.76□□□□□ -1.33
USP47-210ENST00000530369 SLC27A3Q5K4L6 730 aa6.76□□□□□ -1.33
USP47-210ENST00000530369 LARP1Q6PKG0 1096 aaKnown RBP6.76□□□□□ -1.33
USP47-210ENST00000530369 TREML4Q6UXN2 200 aa6.76□□□□□ -1.33
USP47-210ENST00000530369 MKRN1Q9UHC7 482 aaKnown RBP6.76□□□□□ -1.33
USP47-210ENST00000530369 UNC13AQ9UPW8 1703 aa6.76□□□□□ -1.33
USP47-210ENST00000530369 SOS2Q07890 1332 aaPredicted RBP6.76□□□□□ -1.33
USP47-210ENST00000530369 BACH1O14867 736 aa6.75□□□□□ -1.33
USP47-210ENST00000530369 RNF144AP50876 292 aaPredicted RBP6.75□□□□□ -1.33
USP47-210ENST00000530369 GDF10P55107 478 aa6.75□□□□□ -1.33
USP47-210ENST00000530369 TSGA10IPQ3SY00 556 aa6.75□□□□□ -1.33
USP47-210ENST00000530369 NBPF15Q8N660 670 aa6.75□□□□□ -1.33
USP47-210ENST00000530369 CNKSR1Q969H4 720 aa6.75□□□□□ -1.33
USP47-210ENST00000530369 ESYT1Q9BSJ8 1104 aa6.75□□□□□ -1.33
USP47-210ENST00000530369 VRTNQ9H8Y1 702 aa6.75□□□□□ -1.33
USP47-210ENST00000530369 DNAAF2Q9NVR5 837 aaKnown RBP6.75□□□□□ -1.33
USP47-210ENST00000530369 BICRAQ9NZM4 1560 aa6.74□□□□□ -1.33
USP47-210ENST00000530369 WASLO00401 505 aaPredicted RBP6.74□□□□□ -1.33
USP47-210ENST00000530369 GNASQ5JWF2 1037 aa6.74□□□□□ -1.33
USP47-210ENST00000530369 LYSMD3Q7Z3D4 306 aa6.74□□□□□ -1.33
USP47-210ENST00000530369 LARGE2Q8N3Y3 721 aa6.74□□□□□ -1.33
USP47-210ENST00000530369 RAB6BQ9NRW1 208 aa6.74□□□□□ -1.33
USP47-210ENST00000530369 CECR2Q9BXF3 1484 aa6.73□□□□□ -1.33
USP47-210ENST00000530369 RASA1P20936 1047 aa6.73□□□□□ -1.33
USP47-210ENST00000530369 CTSOP43234 321 aaPredicted RBP6.73□□□□□ -1.33
USP47-210ENST00000530369 TLR1Q15399 786 aa6.73□□□□□ -1.33
USP47-210ENST00000530369 OGFOD1Q8N543 542 aa6.73□□□□□ -1.33
USP47-210ENST00000530369 RNF217Q8TC41 542 aa6.73□□□□□ -1.33
USP47-210ENST00000530369 TIMELESSQ9UNS1 1208 aa6.73□□□□□ -1.33
USP47-210ENST00000530369 ARID3CA6NKF2 412 aa6.72□□□□□ -1.33
USP47-210ENST00000530369 INHAP05111 366 aa6.72□□□□□ -1.33
USP47-210ENST00000530369 SNRPBP14678 240 aaKnown RBP6.72□□□□□ -1.33
USP47-210ENST00000530369 TMEM214Q6NUQ4 689 aaKnown RBP6.72□□□□□ -1.33
USP47-210ENST00000530369 KDF1Q8NAX2 398 aaPredicted RBP6.72□□□□□ -1.33
USP47-210ENST00000530369 XAGE2Q96GT9 111 aa6.72□□□□□ -1.33
USP47-210ENST00000530369 ZSCAN10Q96SZ4 725 aaPredicted RBP6.72□□□□□ -1.33
USP47-210ENST00000530369 ETNK1Q9HBU6 452 aa6.72□□□□□ -1.33
USP47-210ENST00000530369 PCDHGA11Q9Y5H2 935 aa6.72□□□□□ -1.33
USP47-210ENST00000530369 FIGNL2A6NMB9 653 aa6.71□□□□□ -1.34
USP47-210ENST00000530369 FAM196BA6NMK8 535 aa6.71□□□□□ -1.34
USP47-210ENST00000530369 IL2RAP01589 272 aa6.71□□□□□ -1.34
USP47-210ENST00000530369 FOXD4L5Q5VV16 416 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms