RNA–Protein interactions for RNA: ENST00000530345.1

NUP98-217, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-217ENST00000530345 SMG6Q86US8 1419 aaKnown RBP10.56□□□□□ -0.72
NUP98-217ENST00000530345 SENP3-EIF4A1A0A087X0R7 540 aa10.55□□□□□ -0.72
NUP98-217ENST00000530345 GRIN3BO60391 1043 aa10.55□□□□□ -0.72
NUP98-217ENST00000530345 GIGYF1O75420 1035 aaPredicted RBP10.55□□□□□ -0.72
NUP98-217ENST00000530345 CARD11Q9BXL7 1154 aa10.55□□□□□ -0.72
NUP98-217ENST00000530345 LRRC4BQ9NT99 713 aa10.55□□□□□ -0.72
NUP98-217ENST00000530345 NSD3Q9BZ95 1437 aa10.55□□□□□ -0.72
NUP98-217ENST00000530345 ANKRD26Q9UPS8 1709 aa10.55□□□□□ -0.72
NUP98-217ENST00000530345 PNPLA7Q6ZV29 1317 aa10.55□□□□□ -0.72
NUP98-217ENST00000530345 TMC1Q8TDI8 760 aa10.54□□□□□ -0.72
NUP98-217ENST00000530345 TFCP2L1Q9NZI6 479 aa10.54□□□□□ -0.72
NUP98-217ENST00000530345 KIF24Q5T7B8 1368 aa10.53□□□□□ -0.72
NUP98-217ENST00000530345 USP47Q96K76 1375 aa10.53□□□□□ -0.72
NUP98-217ENST00000530345 COG3Q96JB2 828 aa10.53□□□□□ -0.72
NUP98-217ENST00000530345 C4BP0C0L5 1744 aa10.53□□□□□ -0.72
NUP98-217ENST00000530345 NSD2O96028 1365 aa10.52□□□□□ -0.72
NUP98-217ENST00000530345 MAP2P11137 1827 aaKnown RBP10.52□□□□□ -0.73
NUP98-217ENST00000530345 KIF13BQ9NQT8 1826 aa10.52□□□□□ -0.73
NUP98-217ENST00000530345 FLAD1Q8NFF5 587 aa10.52□□□□□ -0.73
NUP98-217ENST00000530345 MEGF6O75095 1541 aa10.52□□□□□ -0.73
NUP98-217ENST00000530345 TOGARAM1Q9Y4F4 1720 aa10.51□□□□□ -0.73
NUP98-217ENST00000530345 HOXC9P31274 260 aa10.51□□□□□ -0.73
NUP98-217ENST00000530345 ZCRB1Q8TBF4 217 aaKnown RBP10.51□□□□□ -0.73
NUP98-217ENST00000530345 DDX54Q8TDD1 881 aaKnown RBP10.51□□□□□ -0.73
NUP98-217ENST00000530345 SLC12A5Q9H2X9 1139 aa10.51□□□□□ -0.73
NUP98-217ENST00000530345 CCNL1Q9UK58 526 aaPredicted RBP10.51□□□□□ -0.73
NUP98-217ENST00000530345 TONSLQ96HA7 1378 aa10.51□□□□□ -0.73
NUP98-217ENST00000530345 ZNF831Q5JPB2 1677 aa10.5□□□□□ -0.73
NUP98-217ENST00000530345 AMPHP49418 695 aa10.5□□□□□ -0.73
NUP98-217ENST00000530345 PRIM1P49642 420 aaKnown RBP10.5□□□□□ -0.73
NUP98-217ENST00000530345 NEUROD1Q13562 356 aa10.5□□□□□ -0.73
NUP98-217ENST00000530345 SYTL4Q96C24 671 aaPredicted RBP10.5□□□□□ -0.73
NUP98-217ENST00000530345 SIN3AQ96ST3 1273 aa10.5□□□□□ -0.73
NUP98-217ENST00000530345 MAP3K19Q56UN5 1328 aa10.5□□□□□ -0.73
NUP98-217ENST00000530345 PCDH11XQ9BZA7 1347 aa10.5□□□□□ -0.73
NUP98-217ENST00000530345 PCDH11YQ9BZA8 1340 aa10.5□□□□□ -0.73
NUP98-217ENST00000530345 CICQ96RK0 1608 aaPredicted RBP10.49□□□□□ -0.73
NUP98-217ENST00000530345 KLHL34Q8N239 644 aa10.49□□□□□ -0.73
NUP98-217ENST00000530345 RAPGEF4Q8WZA2 1011 aa10.49□□□□□ -0.73
NUP98-217ENST00000530345 CD2APQ9Y5K6 639 aa10.49□□□□□ -0.73
NUP98-217ENST00000530345 PLEKHG2Q9H7P9 1386 aa10.49□□□□□ -0.73
NUP98-217ENST00000530345 INSRP06213 1382 aa10.48□□□□□ -0.73
NUP98-217ENST00000530345 FLT4P35916 1363 aa10.48□□□□□ -0.73
NUP98-217ENST00000530345 ARFGEF1Q9Y6D6 1849 aa10.47□□□□□ -0.73
NUP98-217ENST00000530345 BRCA1P38398 1863 aaKnown RBP10.47□□□□□ -0.73
NUP98-217ENST00000530345 PELP1Q8IZL8 1130 aaKnown RBP10.47□□□□□ -0.73
NUP98-217ENST00000530345 SMARCC1Q92922 1105 aaPredicted RBP10.47□□□□□ -0.73
NUP98-217ENST00000530345 LTV1Q96GA3 475 aaPredicted RBP10.47□□□□□ -0.73
NUP98-217ENST00000530345 TATP17735 454 aaPredicted RBP10.46□□□□□ -0.73
NUP98-217ENST00000530345 NLGN2Q8NFZ4 835 aa10.46□□□□□ -0.73
NUP98-217ENST00000530345 TESK2Q96S53 571 aa10.46□□□□□ -0.73
NUP98-217ENST00000530345 ADCY9O60503 1353 aa10.46□□□□□ -0.74
NUP98-217ENST00000530345 PALLDQ8WX93 1383 aa10.46□□□□□ -0.74
NUP98-217ENST00000530345 NCAPD2Q15021 1401 aa10.46□□□□□ -0.74
NUP98-217ENST00000530345 ATP10DQ9P241 1426 aa10.46□□□□□ -0.74
NUP98-217ENST00000530345 CDCA8Q53HL2 280 aa10.45□□□□□ -0.74
NUP98-217ENST00000530345 COL5A3P25940 1745 aaPredicted RBP10.44□□□□□ -0.74
NUP98-217ENST00000530345 MSH5O43196 834 aa10.44□□□□□ -0.74
NUP98-217ENST00000530345 YBX3P16989 372 aaKnown RBP eCLIP10.44□□□□□ -0.74
NUP98-217ENST00000530345 IFFO2Q5TF58 517 aa10.44□□□□□ -0.74
NUP98-217ENST00000530345 COL23A1Q86Y22 540 aaPredicted RBP10.44□□□□□ -0.74
NUP98-217ENST00000530345 NBPF6Q5VWK0 638 aa10.43□□□□□ -0.74
NUP98-217ENST00000530345 AK7Q96M32 723 aa10.43□□□□□ -0.74
NUP98-217ENST00000530345 NBPF4Q96M43 638 aa10.43□□□□□ -0.74
NUP98-217ENST00000530345 GPBP1L1Q9HC44 474 aaPredicted RBP10.43□□□□□ -0.74
NUP98-217ENST00000530345 KIAA1551Q9HCM1 1747 aa10.43□□□□□ -0.74
NUP98-217ENST00000530345 VIRMAQ69YN4 1812 aaKnown RBP10.42□□□□□ -0.74
NUP98-217ENST00000530345 ST20-MTHFSA0A0A6YYL1 179 aa10.42□□□□□ -0.74
NUP98-217ENST00000530345 SSFA2P28290 1259 aa10.42□□□□□ -0.74
NUP98-217ENST00000530345 TMF1P82094 1093 aa10.42□□□□□ -0.74
NUP98-217ENST00000530345 N4BP2Q86UW6 1770 aaPredicted RBP10.42□□□□□ -0.74
NUP98-217ENST00000530345 C4AP0C0L4 1744 aa10.41□□□□□ -0.74
NUP98-217ENST00000530345 FYB1O15117 783 aa10.41□□□□□ -0.74
NUP98-217ENST00000530345 KCNQ4P56696 695 aa10.41□□□□□ -0.74
NUP98-217ENST00000530345 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.41□□□□□ -0.74
NUP98-217ENST00000530345 HSPA6P17066 643 aa10.4□□□□□ -0.74
NUP98-217ENST00000530345 RRS1Q15050 365 aaKnown RBP10.4□□□□□ -0.74
NUP98-217ENST00000530345 NKX1-1Q15270 411 aaPredicted RBP10.4□□□□□ -0.74
NUP98-217ENST00000530345 SPG7Q9UQ90 795 aa10.4□□□□□ -0.74
NUP98-217ENST00000530345 MYH14Q7Z406 1995 aaKnown RBP10.39□□□□□ -0.75
NUP98-217ENST00000530345 SBF1O95248 1867 aa10.39□□□□□ -0.75
NUP98-217ENST00000530345 MSL1Q68DK7 614 aa10.39□□□□□ -0.75
NUP98-217ENST00000530345 MPRIPQ6WCQ1 1025 aa10.39□□□□□ -0.75
NUP98-217ENST00000530345 IGSF1Q8N6C5 1336 aa10.38□□□□□ -0.75
NUP98-217ENST00000530345 TNRC6CQ9HCJ0 1690 aaKnown RBP10.38□□□□□ -0.75
NUP98-217ENST00000530345 CYP27B1O15528 508 aa10.38□□□□□ -0.75
NUP98-217ENST00000530345 GGNBP2Q9H3C7 697 aa10.38□□□□□ -0.75
NUP98-217ENST00000530345 WDR90Q96KV7 1748 aa10.38□□□□□ -0.75
NUP98-217ENST00000530345 SCN11AQ9UI33 1791 aa10.37□□□□□ -0.75
NUP98-217ENST00000530345 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.37□□□□□ -0.75
NUP98-217ENST00000530345 LOC102724428A0A0B4J2F2 783 aa10.37□□□□□ -0.75
NUP98-217ENST00000530345 SIK1P57059 783 aa10.37□□□□□ -0.75
NUP98-217ENST00000530345 HSP90AB2PQ58FF8 381 aa10.37□□□□□ -0.75
NUP98-217ENST00000530345 USHBP1Q8N6Y0 703 aa10.37□□□□□ -0.75
NUP98-217ENST00000530345 TMOD3Q9NYL9 352 aa10.37□□□□□ -0.75
NUP98-217ENST00000530345 ADRA2BP18089 450 aa10.36□□□□□ -0.75
NUP98-217ENST00000530345 WASHC2AQ641Q2 1341 aa10.35□□□□□ -0.75
NUP98-217ENST00000530345 C10orf71Q711Q0 1435 aa10.35□□□□□ -0.75
NUP98-217ENST00000530345 DLEC1Q9Y238 1755 aa10.35□□□□□ -0.75
NUP98-217ENST00000530345 FBLN1P23142 703 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms