RNA–Protein interactions for RNA: ENST00000530335.1

ME3-208, Transcript of malic enzyme 3, humanhuman

TSL 4

Gene ME3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-208ENST00000530335 KIF7Q2M1P5 1343 aa28.69■■■□□ 2.18
ME3-208ENST00000530335 DOT1LQ8TEK3 1739 aa28.69■■■□□ 2.18
ME3-208ENST00000530335 DDX54Q8TDD1 881 aaKnown RBP28.69■■■□□ 2.18
ME3-208ENST00000530335 WASHC2AQ641Q2 1341 aa28.69■■■□□ 2.18
ME3-208ENST00000530335 PPM1GO15355 546 aaPredicted RBP28.68■■■□□ 2.18
ME3-208ENST00000530335 ZCRB1Q8TBF4 217 aaKnown RBP28.68■■■□□ 2.18
ME3-208ENST00000530335 POLKQ9UBT6 870 aa28.67■■■□□ 2.18
ME3-208ENST00000530335 NCAPD2Q15021 1401 aa28.67■■■□□ 2.18
ME3-208ENST00000530335 PROM2Q8N271 834 aa28.66■■■□□ 2.18
ME3-208ENST00000530335 RAPGEF4Q8WZA2 1011 aa28.66■■■□□ 2.18
ME3-208ENST00000530335 PKD1L3Q7Z443 1732 aa28.64■■■□□ 2.18
ME3-208ENST00000530335 TATP17735 454 aaPredicted RBP28.63■■■□□ 2.17
ME3-208ENST00000530335 TXNRD1Q16881 649 aa28.63■■■□□ 2.17
ME3-208ENST00000530335 TNNT2P45379 298 aaPredicted RBP28.62■■■□□ 2.17
ME3-208ENST00000530335 KNSTRNQ9Y448 316 aa28.61■■■□□ 2.17
ME3-208ENST00000530335 ANO8Q9HCE9 1232 aaPredicted RBP28.59■■■□□ 2.17
ME3-208ENST00000530335 PAPPAQ13219 1627 aa28.58■■■□□ 2.17
ME3-208ENST00000530335 CASZ1Q86V15 1759 aa28.57■■■□□ 2.16
ME3-208ENST00000530335 MORC1Q86VD1 984 aa28.57■■■□□ 2.16
ME3-208ENST00000530335 PCDH11XQ9BZA7 1347 aa28.57■■■□□ 2.16
ME3-208ENST00000530335 PCDH11YQ9BZA8 1340 aa28.57■■■□□ 2.16
ME3-208ENST00000530335 EYA1Q99502 592 aa28.56■■■□□ 2.16
ME3-208ENST00000530335 LY75O60449 1722 aa28.55■■■□□ 2.16
ME3-208ENST00000530335 EIF4A2Q14240 407 aaKnown RBP28.54■■■□□ 2.16
ME3-208ENST00000530335 AMER1Q5JTC6 1135 aaPredicted RBP28.54■■■□□ 2.16
ME3-208ENST00000530335 PRIM1P49642 420 aaKnown RBP28.53■■■□□ 2.16
ME3-208ENST00000530335 SYTL4Q96C24 671 aaPredicted RBP28.52■■■□□ 2.16
ME3-208ENST00000530335 TOGARAM1Q9Y4F4 1720 aa28.52■■■□□ 2.16
ME3-208ENST00000530335 STK32BQ9NY57 414 aa28.51■■■□□ 2.15
ME3-208ENST00000530335 ITGB4P16144 1822 aa28.5■■■□□ 2.15
ME3-208ENST00000530335 CYP27B1O15528 508 aa28.49■■■□□ 2.15
ME3-208ENST00000530335 PER1O15534 1290 aaPredicted RBP28.49■■■□□ 2.15
ME3-208ENST00000530335 PLEKHG2Q9H7P9 1386 aa28.49■■■□□ 2.15
ME3-208ENST00000530335 SLC15A2Q16348 729 aa28.48■■■□□ 2.15
ME3-208ENST00000530335 IGSF1Q8N6C5 1336 aa28.47■■■□□ 2.15
ME3-208ENST00000530335 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.47■■■□□ 2.15
ME3-208ENST00000530335 SPG7Q9UQ90 795 aa28.47■■■□□ 2.15
ME3-208ENST00000530335 SLC27A3Q5K4L6 730 aa28.46■■■□□ 2.15
ME3-208ENST00000530335 LRRC4BQ9NT99 713 aa28.46■■■□□ 2.15
ME3-208ENST00000530335 QSER1Q2KHR3 1735 aa28.46■■■□□ 2.15
ME3-208ENST00000530335 SPON1Q9HCB6 807 aa28.43■■■□□ 2.14
ME3-208ENST00000530335 NKX1-1Q15270 411 aaPredicted RBP28.42■■■□□ 2.14
ME3-208ENST00000530335 PDGFDQ9GZP0 370 aaPredicted RBP28.42■■■□□ 2.14
ME3-208ENST00000530335 NPC1L1Q9UHC9 1359 aa28.41■■■□□ 2.14
ME3-208ENST00000530335 TUBGCP6Q96RT7 1819 aa28.4■■■□□ 2.14
ME3-208ENST00000530335 ZNF827Q17R98 1081 aa28.39■■■□□ 2.14
ME3-208ENST00000530335 CC2D1BQ5T0F9 858 aaKnown RBP28.39■■■□□ 2.14
ME3-208ENST00000530335 IFNL2Q8IZJ0 200 aa28.37■■■□□ 2.13
ME3-208ENST00000530335 TAF1LQ8IZX4 1826 aa28.36■■■□□ 2.13
ME3-208ENST00000530335 C5P01031 1676 aa28.36■■■□□ 2.13
ME3-208ENST00000530335 PHKG2P15735 406 aa28.36■■■□□ 2.13
ME3-208ENST00000530335 MPRIPQ6WCQ1 1025 aa28.36■■■□□ 2.13
ME3-208ENST00000530335 AKT1S1Q96B36 256 aa28.36■■■□□ 2.13
ME3-208ENST00000530335 IL13P35225 146 aa28.35■■■□□ 2.13
ME3-208ENST00000530335 CNGB1Q14028 1251 aaPredicted RBP28.35■■■□□ 2.13
ME3-208ENST00000530335 CCNL1Q9UK58 526 aaPredicted RBP28.35■■■□□ 2.13
ME3-208ENST00000530335 ZBTB7AO95365 584 aa28.34■■■□□ 2.13
ME3-208ENST00000530335 MTHFSP49914 203 aa28.34■■■□□ 2.13
ME3-208ENST00000530335 KCNQ4P56696 695 aa28.34■■■□□ 2.13
ME3-208ENST00000530335 KDRP35968 1356 aa28.34■■■□□ 2.13
ME3-208ENST00000530335 PALLDQ8WX93 1383 aa28.33■■■□□ 2.13
ME3-208ENST00000530335 AEBP1Q8IUX7 1158 aa28.32■■■□□ 2.12
ME3-208ENST00000530335 PLEKHO1Q53GL0 409 aaPredicted RBP28.31■■■□□ 2.12
ME3-208ENST00000530335 PPP1R1BQ9UD71 204 aaPredicted RBP28.31■■■□□ 2.12
ME3-208ENST00000530335 PIGBQ92521 554 aa28.3■■■□□ 2.12
ME3-208ENST00000530335 SMARCC1Q92922 1105 aaPredicted RBP28.3■■■□□ 2.12
ME3-208ENST00000530335 MTFR1LQ9H019 292 aa28.3■■■□□ 2.12
ME3-208ENST00000530335 AMOTQ4VCS5 1084 aa28.29■■■□□ 2.12
ME3-208ENST00000530335 SULT6B1Q6IMI4 303 aa28.29■■■□□ 2.12
ME3-208ENST00000530335 PTGER2P43116 358 aa28.28■■■□□ 2.12
ME3-208ENST00000530335 ATF5Q9Y2D1 282 aaPredicted RBP28.28■■■□□ 2.12
ME3-208ENST00000530335 COL24A1Q17RW2 1714 aa28.27■■■□□ 2.12
ME3-208ENST00000530335 TMOD3Q9NYL9 352 aa28.27■■■□□ 2.12
ME3-208ENST00000530335 PNPLA7Q6ZV29 1317 aa28.26■■■□□ 2.11
ME3-208ENST00000530335 HSP90AB1P08238 724 aaKnown RBP28.26■■■□□ 2.11
ME3-208ENST00000530335 HMGB2P26583 209 aaKnown RBP28.26■■■□□ 2.11
ME3-208ENST00000530335 TFCP2L1Q9NZI6 479 aa28.26■■■□□ 2.11
ME3-208ENST00000530335 ZNF530Q6P9A1 599 aaPredicted RBP28.25■■■□□ 2.11
ME3-208ENST00000530335 COL3A1P02461 1466 aaPredicted RBP28.25■■■□□ 2.11
ME3-208ENST00000530335 C4BP0C0L5 1744 aa28.24■■■□□ 2.11
ME3-208ENST00000530335 DCAF5Q96JK2 942 aa28.24■■■□□ 2.11
ME3-208ENST00000530335 DIAPH1O60610 1272 aaKnown RBP28.23■■■□□ 2.11
ME3-208ENST00000530335 SLC16A10Q8TF71 515 aa28.23■■■□□ 2.11
ME3-208ENST00000530335 SGIP1Q9BQI5 828 aa28.23■■■□□ 2.11
ME3-208ENST00000530335 KDM6AO15550 1401 aaPredicted RBP28.23■■■□□ 2.11
ME3-208ENST00000530335 SCN11AQ9UI33 1791 aa28.22■■■□□ 2.11
ME3-208ENST00000530335 ERVV-2B6SEH9 535 aa28.22■■■□□ 2.11
ME3-208ENST00000530335 VIRMAQ69YN4 1812 aaKnown RBP28.21■■■□□ 2.11
ME3-208ENST00000530335 C1orf141Q5JVX7 400 aa28.2■■■□□ 2.1
ME3-208ENST00000530335 ZNF831Q5JPB2 1677 aa28.19■■■□□ 2.1
ME3-208ENST00000530335 ASAP1Q9ULH1 1129 aa28.19■■■□□ 2.1
ME3-208ENST00000530335 UBR3Q6ZT12 1888 aa28.19■■■□□ 2.1
ME3-208ENST00000530335 LOC102724428A0A0B4J2F2 783 aa28.17■■■□□ 2.1
ME3-208ENST00000530335 HMOX1P09601 288 aa28.17■■■□□ 2.1
ME3-208ENST00000530335 SIK1P57059 783 aa28.17■■■□□ 2.1
ME3-208ENST00000530335 ATG3Q9NT62 314 aa28.17■■■□□ 2.1
ME3-208ENST00000530335 CABP4P57796 275 aa28.13■■■□□ 2.09
ME3-208ENST00000530335 COL23A1Q86Y22 540 aaPredicted RBP28.13■■■□□ 2.09
ME3-208ENST00000530335 AKAP4Q5JQC9 854 aa28.12■■■□□ 2.09
ME3-208ENST00000530335 ARXQ96QS3 562 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms