RNA–Protein interactions for RNA: ENST00000530290.5

CTSB-216, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-216ENST00000530290 PELP1Q8IZL8 1130 aaKnown RBP8.03□□□□□ -1.12
CTSB-216ENST00000530290 KLHL34Q8N239 644 aa8.03□□□□□ -1.12
CTSB-216ENST00000530290 CD2APQ9Y5K6 639 aa8.03□□□□□ -1.12
CTSB-216ENST00000530290 TAF1LQ8IZX4 1826 aa8.03□□□□□ -1.12
CTSB-216ENST00000530290 CICQ96RK0 1608 aaPredicted RBP8.03□□□□□ -1.12
CTSB-216ENST00000530290 ROCK2O75116 1388 aaKnown RBP8.02□□□□□ -1.13
CTSB-216ENST00000530290 SOX12O15370 315 aa8.02□□□□□ -1.13
CTSB-216ENST00000530290 ANKRD24Q8TF21 1146 aa8.02□□□□□ -1.13
CTSB-216ENST00000530290 RTL1A6NKG5 1358 aa8.01□□□□□ -1.13
CTSB-216ENST00000530290 USP47Q96K76 1375 aa8.01□□□□□ -1.13
CTSB-216ENST00000530290 HDGFL2Q7Z4V5 671 aaPredicted RBP8.01□□□□□ -1.13
CTSB-216ENST00000530290 NLGN2Q8NFZ4 835 aa8.01□□□□□ -1.13
CTSB-216ENST00000530290 PUS7Q96PZ0 661 aaKnown RBP8.01□□□□□ -1.13
CTSB-216ENST00000530290 CCNL1Q9UK58 526 aaPredicted RBP8.01□□□□□ -1.13
CTSB-216ENST00000530290 NSD2O96028 1365 aa8□□□□□ -1.13
CTSB-216ENST00000530290 YBX3P16989 372 aaKnown RBP eCLIP8□□□□□ -1.131e-9■■□□□ 13.9
CTSB-216ENST00000530290 TERF2IPQ9NYB0 399 aa8□□□□□ -1.13
CTSB-216ENST00000530290 CD163L1Q9NR16 1453 aa8□□□□□ -1.13
CTSB-216ENST00000530290 SLC24A1O60721 1099 aa7.99□□□□□ -1.13
CTSB-216ENST00000530290 APLP1P51693 650 aa7.99□□□□□ -1.13
CTSB-216ENST00000530290 UBR3Q6ZT12 1888 aa7.99□□□□□ -1.13
CTSB-216ENST00000530290 SMG6Q86US8 1419 aaKnown RBP7.99□□□□□ -1.13
CTSB-216ENST00000530290 IP6K1Q92551 441 aa7.99□□□□□ -1.13
CTSB-216ENST00000530290 KIF3CO14782 793 aa7.98□□□□□ -1.13
CTSB-216ENST00000530290 JMYQ8N9B5 988 aa7.98□□□□□ -1.13
CTSB-216ENST00000530290 SYTL4Q96C24 671 aaPredicted RBP7.98□□□□□ -1.13
CTSB-216ENST00000530290 KIF13BQ9NQT8 1826 aa7.98□□□□□ -1.13
CTSB-216ENST00000530290 C4BP0C0L5 1744 aa7.98□□□□□ -1.13
CTSB-216ENST00000530290 PRIM1P49642 420 aaKnown RBP7.97□□□□□ -1.13
CTSB-216ENST00000530290 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.97□□□□□ -1.13
CTSB-216ENST00000530290 ZCRB1Q8TBF4 217 aaKnown RBP7.97□□□□□ -1.13
CTSB-216ENST00000530290 DDX54Q8TDD1 881 aaKnown RBP7.97□□□□□ -1.13
CTSB-216ENST00000530290 SMARCC1Q92922 1105 aaPredicted RBP7.97□□□□□ -1.13
CTSB-216ENST00000530290 MEGF6O75095 1541 aa7.97□□□□□ -1.13
CTSB-216ENST00000530290 PCDH11XQ9BZA7 1347 aa7.97□□□□□ -1.13
CTSB-216ENST00000530290 PCDH11YQ9BZA8 1340 aa7.97□□□□□ -1.13
CTSB-216ENST00000530290 A0A1W2PP64 1363 aa7.97□□□□□ -1.13
CTSB-216ENST00000530290 KIF24Q5T7B8 1368 aa7.97□□□□□ -1.13
CTSB-216ENST00000530290 MSH5O43196 834 aa7.96□□□□□ -1.14
CTSB-216ENST00000530290 NME9Q86XW9 330 aa7.96□□□□□ -1.14
CTSB-216ENST00000530290 COL23A1Q86Y22 540 aaPredicted RBP7.96□□□□□ -1.14
CTSB-216ENST00000530290 RGPD2P0DJD1 1756 aa7.96□□□□□ -1.14
CTSB-216ENST00000530290 ITGB4P16144 1822 aa7.96□□□□□ -1.14
CTSB-216ENST00000530290 PALLDQ8WX93 1383 aa7.96□□□□□ -1.14
CTSB-216ENST00000530290 PLEKHG2Q9H7P9 1386 aa7.96□□□□□ -1.14
CTSB-216ENST00000530290 PKD1L3Q7Z443 1732 aa7.95□□□□□ -1.14
CTSB-216ENST00000530290 WDR90Q96KV7 1748 aa7.95□□□□□ -1.14
CTSB-216ENST00000530290 TOGARAM1Q9Y4F4 1720 aa7.95□□□□□ -1.14
CTSB-216ENST00000530290 SSFA2P28290 1259 aa7.95□□□□□ -1.14
CTSB-216ENST00000530290 ZNF526Q8TF50 670 aaPredicted RBP7.95□□□□□ -1.14
CTSB-216ENST00000530290 RAPGEF4Q8WZA2 1011 aa7.95□□□□□ -1.14
CTSB-216ENST00000530290 L3MBTL2Q969R5 705 aa7.95□□□□□ -1.14
CTSB-216ENST00000530290 COG3Q96JB2 828 aa7.95□□□□□ -1.14
CTSB-216ENST00000530290 IGSF1Q8N6C5 1336 aa7.95□□□□□ -1.14
CTSB-216ENST00000530290 TOMM70O94826 608 aa7.94□□□□□ -1.14
CTSB-216ENST00000530290 HOXC9P31274 260 aa7.94□□□□□ -1.14
CTSB-216ENST00000530290 AMPHP49418 695 aa7.94□□□□□ -1.14
CTSB-216ENST00000530290 HTRA3P83110 453 aa7.94□□□□□ -1.14
CTSB-216ENST00000530290 AK7Q96M32 723 aa7.94□□□□□ -1.14
CTSB-216ENST00000530290 WWC3Q9ULE0 1092 aa7.94□□□□□ -1.14
CTSB-216ENST00000530290 MAP2P11137 1827 aaKnown RBP7.94□□□□□ -1.14
CTSB-216ENST00000530290 ARFGEF1Q9Y6D6 1849 aa7.94□□□□□ -1.14
CTSB-216ENST00000530290 C10orf71Q711Q0 1435 aa7.94□□□□□ -1.14
CTSB-216ENST00000530290 BRCA1P38398 1863 aaKnown RBP7.94□□□□□ -1.14
CTSB-216ENST00000530290 ZNF831Q5JPB2 1677 aa7.93□□□□□ -1.14
CTSB-216ENST00000530290 TMC1Q8TDI8 760 aa7.93□□□□□ -1.14
CTSB-216ENST00000530290 KLRG1Q96E93 195 aa7.93□□□□□ -1.14
CTSB-216ENST00000530290 MAP3K19Q56UN5 1328 aa7.93□□□□□ -1.14
CTSB-216ENST00000530290 TNRC6CQ9HCJ0 1690 aaKnown RBP7.92□□□□□ -1.14
CTSB-216ENST00000530290 TATP17735 454 aaPredicted RBP7.92□□□□□ -1.14
CTSB-216ENST00000530290 MSL1Q68DK7 614 aa7.92□□□□□ -1.14
CTSB-216ENST00000530290 RBM46Q8TBY0 533 aaKnown RBP7.92□□□□□ -1.14
CTSB-216ENST00000530290 KIF20BQ96Q89 1820 aa7.92□□□□□ -1.14
CTSB-216ENST00000530290 KCNQ4P56696 695 aa7.91□□□□□ -1.14
CTSB-216ENST00000530290 TGFB2P61812 414 aa7.91□□□□□ -1.14
CTSB-216ENST00000530290 FSTL1Q12841 308 aa7.91□□□□□ -1.14
CTSB-216ENST00000530290 LTV1Q96GA3 475 aaPredicted RBP7.91□□□□□ -1.14
CTSB-216ENST00000530290 CARD11Q9BXL7 1154 aa7.91□□□□□ -1.14
CTSB-216ENST00000530290 SLC12A5Q9H2X9 1139 aa7.91□□□□□ -1.14
CTSB-216ENST00000530290 INSRP06213 1382 aa7.91□□□□□ -1.14
CTSB-216ENST00000530290 FLT4P35916 1363 aa7.91□□□□□ -1.14
CTSB-216ENST00000530290 NCAPD2Q15021 1401 aa7.91□□□□□ -1.14
CTSB-216ENST00000530290 PXDNLA1KZ92 1463 aa7.91□□□□□ -1.14
CTSB-216ENST00000530290 KIAA1551Q9HCM1 1747 aa7.91□□□□□ -1.14
CTSB-216ENST00000530290 PCNTO95613 3336 aa7.91□□□□□ -1.14
CTSB-216ENST00000530290 ANKRD26Q9UPS8 1709 aa7.9□□□□□ -1.14
CTSB-216ENST00000530290 ZC3H4Q9UPT8 1303 aaKnown RBP7.9□□□□□ -1.14
CTSB-216ENST00000530290 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.9□□□□□ -1.14
CTSB-216ENST00000530290 ADRA2BP18089 450 aa7.9□□□□□ -1.14
CTSB-216ENST00000530290 C16orf71Q8IYS4 520 aaPredicted RBP7.89□□□□□ -1.15
CTSB-216ENST00000530290 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.89□□□□□ -1.15
CTSB-216ENST00000530290 C4AP0C0L4 1744 aa7.89□□□□□ -1.15
CTSB-216ENST00000530290 KDM2BQ8NHM5 1336 aa7.88□□□□□ -1.15
CTSB-216ENST00000530290 LOC102724428A0A0B4J2F2 783 aa7.88□□□□□ -1.15
CTSB-216ENST00000530290 SIK1P57059 783 aa7.88□□□□□ -1.15
CTSB-216ENST00000530290 NKX1-1Q15270 411 aaPredicted RBP7.88□□□□□ -1.15
CTSB-216ENST00000530290 NBPF6Q5VWK0 638 aa7.88□□□□□ -1.15
CTSB-216ENST00000530290 MPRIPQ6WCQ1 1025 aa7.88□□□□□ -1.15
CTSB-216ENST00000530290 NLGN1Q8N2Q7 840 aa7.88□□□□□ -1.15
CTSB-216ENST00000530290 NBPF4Q96M43 638 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms