RNA–Protein interactions for RNA: ENST00000530174.1

PCNX3-203, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 1,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-203ENST00000530174 SHANK3Q9BYB0 1731 aa25.85■■□□□ 1.73
PCNX3-203ENST00000530174 WASHC2AQ641Q2 1341 aa25.85■■□□□ 1.73
PCNX3-203ENST00000530174 ZCRB1Q8TBF4 217 aaKnown RBP25.84■■□□□ 1.73
PCNX3-203ENST00000530174 RAPGEF4Q8WZA2 1011 aa25.83■■□□□ 1.73
PCNX3-203ENST00000530174 NBPF14Q5TI25 921 aa25.82■■□□□ 1.72
PCNX3-203ENST00000530174 KNSTRNQ9Y448 316 aa25.82■■□□□ 1.72
PCNX3-203ENST00000530174 KAT6BQ8WYB5 2073 aa25.81■■□□□ 1.72
PCNX3-203ENST00000530174 PROM2Q8N271 834 aa25.8■■□□□ 1.72
PCNX3-203ENST00000530174 BTAF1O14981 1849 aa25.79■■□□□ 1.72
PCNX3-203ENST00000530174 LRP5O75197 1615 aa25.79■■□□□ 1.72
PCNX3-203ENST00000530174 TATP17735 454 aaPredicted RBP25.79■■□□□ 1.72
PCNX3-203ENST00000530174 NCAPD2Q15021 1401 aa25.79■■□□□ 1.72
PCNX3-203ENST00000530174 MORC1Q86VD1 984 aa25.78■■□□□ 1.72
PCNX3-203ENST00000530174 TXNRD1Q16881 649 aa25.77■■□□□ 1.72
PCNX3-203ENST00000530174 AMER1Q5JTC6 1135 aaPredicted RBP25.76■■□□□ 1.71
PCNX3-203ENST00000530174 DOT1LQ8TEK3 1739 aa25.76■■□□□ 1.71
PCNX3-203ENST00000530174 EYA1Q99502 592 aa25.75■■□□□ 1.71
PCNX3-203ENST00000530174 ANO8Q9HCE9 1232 aaPredicted RBP25.75■■□□□ 1.71
PCNX3-203ENST00000530174 EIF4A2Q14240 407 aaKnown RBP25.74■■□□□ 1.71
PCNX3-203ENST00000530174 PCDH11XQ9BZA7 1347 aa25.72■■□□□ 1.71
PCNX3-203ENST00000530174 PCDH11YQ9BZA8 1340 aa25.72■■□□□ 1.71
PCNX3-203ENST00000530174 PRIM1P49642 420 aaKnown RBP25.72■■□□□ 1.71
PCNX3-203ENST00000530174 SYTL4Q96C24 671 aaPredicted RBP25.72■■□□□ 1.71
PCNX3-203ENST00000530174 PKD1L3Q7Z443 1732 aa25.71■■□□□ 1.71
PCNX3-203ENST00000530174 PER1O15534 1290 aaPredicted RBP25.7■■□□□ 1.7
PCNX3-203ENST00000530174 CYP27B1O15528 508 aa25.68■■□□□ 1.7
PCNX3-203ENST00000530174 IGSF1Q8N6C5 1336 aa25.65■■□□□ 1.7
PCNX3-203ENST00000530174 STK32BQ9NY57 414 aa25.65■■□□□ 1.7
PCNX3-203ENST00000530174 PAPPAQ13219 1627 aa25.65■■□□□ 1.7
PCNX3-203ENST00000530174 CC2D1BQ5T0F9 858 aaKnown RBP25.64■■□□□ 1.7
PCNX3-203ENST00000530174 SPG7Q9UQ90 795 aa25.64■■□□□ 1.7
PCNX3-203ENST00000530174 LRRC4BQ9NT99 713 aa25.63■■□□□ 1.69
PCNX3-203ENST00000530174 CASZ1Q86V15 1759 aa25.62■■□□□ 1.69
PCNX3-203ENST00000530174 SLC15A2Q16348 729 aa25.62■■□□□ 1.69
PCNX3-203ENST00000530174 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.62■■□□□ 1.69
PCNX3-203ENST00000530174 TOGARAM1Q9Y4F4 1720 aa25.62■■□□□ 1.69
PCNX3-203ENST00000530174 LY75O60449 1722 aa25.6■■□□□ 1.69
PCNX3-203ENST00000530174 SLC27A3Q5K4L6 730 aa25.6■■□□□ 1.69
PCNX3-203ENST00000530174 PDGFDQ9GZP0 370 aaPredicted RBP25.6■■□□□ 1.69
PCNX3-203ENST00000530174 PLEKHG2Q9H7P9 1386 aa25.59■■□□□ 1.69
PCNX3-203ENST00000530174 NPC1L1Q9UHC9 1359 aa25.59■■□□□ 1.69
PCNX3-203ENST00000530174 MTHFSP49914 203 aa25.58■■□□□ 1.69
PCNX3-203ENST00000530174 NKX1-1Q15270 411 aaPredicted RBP25.58■■□□□ 1.69
PCNX3-203ENST00000530174 KCNQ4P56696 695 aa25.57■■□□□ 1.68
PCNX3-203ENST00000530174 SPON1Q9HCB6 807 aa25.57■■□□□ 1.68
PCNX3-203ENST00000530174 ITGB4P16144 1822 aa25.56■■□□□ 1.68
PCNX3-203ENST00000530174 PHKG2P15735 406 aa25.56■■□□□ 1.68
PCNX3-203ENST00000530174 IL13P35225 146 aa25.56■■□□□ 1.68
PCNX3-203ENST00000530174 CNGB1Q14028 1251 aaPredicted RBP25.56■■□□□ 1.68
PCNX3-203ENST00000530174 ZNF827Q17R98 1081 aa25.56■■□□□ 1.68
PCNX3-203ENST00000530174 MPRIPQ6WCQ1 1025 aa25.56■■□□□ 1.68
PCNX3-203ENST00000530174 AEBP1Q8IUX7 1158 aa25.56■■□□□ 1.68
PCNX3-203ENST00000530174 IFNL2Q8IZJ0 200 aa25.55■■□□□ 1.68
PCNX3-203ENST00000530174 CCNL1Q9UK58 526 aaPredicted RBP25.53■■□□□ 1.68
PCNX3-203ENST00000530174 ZBTB7AO95365 584 aa25.52■■□□□ 1.68
PCNX3-203ENST00000530174 SULT6B1Q6IMI4 303 aa25.52■■□□□ 1.68
PCNX3-203ENST00000530174 AKT1S1Q96B36 256 aa25.52■■□□□ 1.68
PCNX3-203ENST00000530174 PLEKHO1Q53GL0 409 aaPredicted RBP25.51■■□□□ 1.67
PCNX3-203ENST00000530174 PIGBQ92521 554 aa25.51■■□□□ 1.67
PCNX3-203ENST00000530174 KDRP35968 1356 aa25.51■■□□□ 1.67
PCNX3-203ENST00000530174 PALLDQ8WX93 1383 aa25.51■■□□□ 1.67
PCNX3-203ENST00000530174 AMOTQ4VCS5 1084 aa25.48■■□□□ 1.67
PCNX3-203ENST00000530174 ZNF530Q6P9A1 599 aaPredicted RBP25.48■■□□□ 1.67
PCNX3-203ENST00000530174 QSER1Q2KHR3 1735 aa25.47■■□□□ 1.67
PCNX3-203ENST00000530174 SMARCC1Q92922 1105 aaPredicted RBP25.47■■□□□ 1.67
PCNX3-203ENST00000530174 TMOD3Q9NYL9 352 aa25.47■■□□□ 1.67
PCNX3-203ENST00000530174 PPP1R1BQ9UD71 204 aaPredicted RBP25.47■■□□□ 1.67
PCNX3-203ENST00000530174 ATF5Q9Y2D1 282 aaPredicted RBP25.47■■□□□ 1.67
PCNX3-203ENST00000530174 TUBGCP6Q96RT7 1819 aa25.47■■□□□ 1.67
PCNX3-203ENST00000530174 DIAPH1O60610 1272 aaKnown RBP25.45■■□□□ 1.66
PCNX3-203ENST00000530174 MTFR1LQ9H019 292 aa25.45■■□□□ 1.66
PCNX3-203ENST00000530174 TFCP2L1Q9NZI6 479 aa25.45■■□□□ 1.66
PCNX3-203ENST00000530174 COL3A1P02461 1466 aaPredicted RBP25.45■■□□□ 1.66
PCNX3-203ENST00000530174 C5P01031 1676 aa25.45■■□□□ 1.66
PCNX3-203ENST00000530174 PNPLA7Q6ZV29 1317 aa25.44■■□□□ 1.66
PCNX3-203ENST00000530174 HSP90AB1P08238 724 aaKnown RBP25.44■■□□□ 1.66
PCNX3-203ENST00000530174 PTGER2P43116 358 aa25.44■■□□□ 1.66
PCNX3-203ENST00000530174 HMOX1P09601 288 aa25.43■■□□□ 1.66
PCNX3-203ENST00000530174 DCAF5Q96JK2 942 aa25.43■■□□□ 1.66
PCNX3-203ENST00000530174 KDM6AO15550 1401 aaPredicted RBP25.43■■□□□ 1.66
PCNX3-203ENST00000530174 TAF1LQ8IZX4 1826 aa25.42■■□□□ 1.66
PCNX3-203ENST00000530174 ERVV-2B6SEH9 535 aa25.41■■□□□ 1.66
PCNX3-203ENST00000530174 C1orf141Q5JVX7 400 aa25.41■■□□□ 1.66
PCNX3-203ENST00000530174 ASAP1Q9ULH1 1129 aa25.41■■□□□ 1.66
PCNX3-203ENST00000530174 SGIP1Q9BQI5 828 aa25.39■■□□□ 1.66
PCNX3-203ENST00000530174 LOC102724428A0A0B4J2F2 783 aa25.38■■□□□ 1.65
PCNX3-203ENST00000530174 SIK1P57059 783 aa25.38■■□□□ 1.65
PCNX3-203ENST00000530174 ATG3Q9NT62 314 aa25.38■■□□□ 1.65
PCNX3-203ENST00000530174 HMGB2P26583 209 aaKnown RBP25.37■■□□□ 1.65
PCNX3-203ENST00000530174 SLC16A10Q8TF71 515 aa25.37■■□□□ 1.65
PCNX3-203ENST00000530174 C4BP0C0L5 1744 aa25.37■■□□□ 1.65
PCNX3-203ENST00000530174 CABP4P57796 275 aa25.36■■□□□ 1.65
PCNX3-203ENST00000530174 U2SURPO15042 1029 aaKnown RBP25.35■■□□□ 1.65
PCNX3-203ENST00000530174 PPP2R1AP30153 589 aa25.34■■□□□ 1.65
PCNX3-203ENST00000530174 AKAP4Q5JQC9 854 aa25.34■■□□□ 1.65
PCNX3-203ENST00000530174 COL23A1Q86Y22 540 aaPredicted RBP25.33■■□□□ 1.65
PCNX3-203ENST00000530174 CFAP53Q96M91 514 aa25.33■■□□□ 1.65
PCNX3-203ENST00000530174 SCN11AQ9UI33 1791 aa25.33■■□□□ 1.65
PCNX3-203ENST00000530174 ITPK1Q13572 414 aa25.32■■□□□ 1.64
PCNX3-203ENST00000530174 LINC00116Q8NCU8 138 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms