RNA–Protein interactions for RNA: ENST00000529939.5

MVB12A-211, Transcript of multivesicular body subunit 12A, humanhuman

TSL 3 BASIC

Gene MVB12A, Length 1,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MVB12A-211ENST00000529939 ST20-MTHFSA0A0A6YYL1 179 aa23.55■■□□□ 1.36
MVB12A-211ENST00000529939 SLC24A1O60721 1099 aa23.55■■□□□ 1.36
MVB12A-211ENST00000529939 DOT1LQ8TEK3 1739 aa23.55■■□□□ 1.36
MVB12A-211ENST00000529939 CHD4Q14839 1912 aa23.55■■□□□ 1.36
MVB12A-211ENST00000529939 SHANK3Q9BYB0 1731 aa23.54■■□□□ 1.36
MVB12A-211ENST00000529939 PRIM1P49642 420 aaKnown RBP23.54■■□□□ 1.36
MVB12A-211ENST00000529939 MEGF6O75095 1541 aa23.54■■□□□ 1.36
MVB12A-211ENST00000529939 RTL1A6NKG5 1358 aa23.53■■□□□ 1.36
MVB12A-211ENST00000529939 LY75O60449 1722 aa23.53■■□□□ 1.36
MVB12A-211ENST00000529939 FBLN1P23142 703 aa23.53■■□□□ 1.36
MVB12A-211ENST00000529939 AMPHP49418 695 aa23.53■■□□□ 1.36
MVB12A-211ENST00000529939 ZCRB1Q8TBF4 217 aaKnown RBP23.52■■□□□ 1.36
MVB12A-211ENST00000529939 SYTL4Q96C24 671 aaPredicted RBP23.52■■□□□ 1.36
MVB12A-211ENST00000529939 TUBGCP6Q96RT7 1819 aa23.52■■□□□ 1.36
MVB12A-211ENST00000529939 RGPD2P0DJD1 1756 aa23.51■■□□□ 1.35
MVB12A-211ENST00000529939 POLD1P28340 1107 aa23.51■■□□□ 1.35
MVB12A-211ENST00000529939 TFCP2L1Q9NZI6 479 aa23.51■■□□□ 1.35
MVB12A-211ENST00000529939 KCNQ4P56696 695 aa23.5■■□□□ 1.35
MVB12A-211ENST00000529939 CGNL1Q0VF96 1302 aa23.48■■□□□ 1.35
MVB12A-211ENST00000529939 GPR162Q16538 588 aa23.47■■□□□ 1.35
MVB12A-211ENST00000529939 FYB1O15117 783 aa23.46■■□□□ 1.35
MVB12A-211ENST00000529939 RRS1Q15050 365 aaKnown RBP23.46■■□□□ 1.35
MVB12A-211ENST00000529939 NBPF6Q5VWK0 638 aa23.46■■□□□ 1.35
MVB12A-211ENST00000529939 NBPF4Q96M43 638 aa23.46■■□□□ 1.35
MVB12A-211ENST00000529939 CCNL1Q9UK58 526 aaPredicted RBP23.46■■□□□ 1.35
MVB12A-211ENST00000529939 KLHL34Q8N239 644 aa23.44■■□□□ 1.34
MVB12A-211ENST00000529939 SMG6Q86US8 1419 aaKnown RBP23.43■■□□□ 1.34
MVB12A-211ENST00000529939 GGNBP2Q9H3C7 697 aa23.43■■□□□ 1.34
MVB12A-211ENST00000529939 USHBP1Q8N6Y0 703 aa23.42■■□□□ 1.34
MVB12A-211ENST00000529939 RAPGEF4Q8WZA2 1011 aa23.42■■□□□ 1.34
MVB12A-211ENST00000529939 INSRP06213 1382 aa23.41■■□□□ 1.34
MVB12A-211ENST00000529939 C1QTNF8P60827 252 aa23.41■■□□□ 1.34
MVB12A-211ENST00000529939 TMF1P82094 1093 aa23.41■■□□□ 1.34
MVB12A-211ENST00000529939 NLGN2Q8NFZ4 835 aa23.41■■□□□ 1.34
MVB12A-211ENST00000529939 KIF24Q5T7B8 1368 aa23.4■■□□□ 1.34
MVB12A-211ENST00000529939 TATP17735 454 aaPredicted RBP23.39■■□□□ 1.33
MVB12A-211ENST00000529939 COL23A1Q86Y22 540 aaPredicted RBP23.39■■□□□ 1.33
MVB12A-211ENST00000529939 PCDH11XQ9BZA7 1347 aa23.38■■□□□ 1.33
MVB12A-211ENST00000529939 PCDH11YQ9BZA8 1340 aa23.38■■□□□ 1.33
MVB12A-211ENST00000529939 EIF4G2P78344 907 aaKnown RBP eCLIP23.38■■□□□ 1.33
MVB12A-211ENST00000529939 HSP90AB2PQ58FF8 381 aa23.38■■□□□ 1.33
MVB12A-211ENST00000529939 FLT4P35916 1363 aa23.38■■□□□ 1.33
MVB12A-211ENST00000529939 PELP1Q8IZL8 1130 aaKnown RBP23.37■■□□□ 1.33
MVB12A-211ENST00000529939 C5P01031 1676 aa23.37■■□□□ 1.33
MVB12A-211ENST00000529939 KIF20BQ96Q89 1820 aa23.36■■□□□ 1.33
MVB12A-211ENST00000529939 CDCA8Q53HL2 280 aa23.36■■□□□ 1.33
MVB12A-211ENST00000529939 MSH5O43196 834 aa23.35■■□□□ 1.33
MVB12A-211ENST00000529939 HMGB2P26583 209 aaKnown RBP23.35■■□□□ 1.33
MVB12A-211ENST00000529939 SENP3-EIF4A1A0A087X0R7 540 aa23.34■■□□□ 1.33
MVB12A-211ENST00000529939 PALLDQ8WX93 1383 aa23.34■■□□□ 1.33
MVB12A-211ENST00000529939 GOLGB1Q14789 3259 aaKnown RBP23.34■■□□□ 1.33
MVB12A-211ENST00000529939 YBX3P16989 372 aaKnown RBP eCLIP23.33■■□□□ 1.334e-8■■□□□ 14.2
MVB12A-211ENST00000529939 CYP27B1O15528 508 aa23.32■■□□□ 1.32
MVB12A-211ENST00000529939 GRIN3BO60391 1043 aa23.32■■□□□ 1.32
MVB12A-211ENST00000529939 NCAPD2Q15021 1401 aa23.32■■□□□ 1.32
MVB12A-211ENST00000529939 TAF1LQ8IZX4 1826 aa23.31■■□□□ 1.32
MVB12A-211ENST00000529939 HSPA5P11021 654 aaKnown RBP23.31■■□□□ 1.32
MVB12A-211ENST00000529939 MSL1Q68DK7 614 aa23.31■■□□□ 1.32
MVB12A-211ENST00000529939 FLAD1Q8NFF5 587 aa23.31■■□□□ 1.32
MVB12A-211ENST00000529939 PKD1L3Q7Z443 1732 aa23.3■■□□□ 1.32
MVB12A-211ENST00000529939 TOGARAM1Q9Y4F4 1720 aa23.3■■□□□ 1.32
MVB12A-211ENST00000529939 GIGYF1O75420 1035 aaPredicted RBP23.3■■□□□ 1.32
MVB12A-211ENST00000529939 MPRIPQ6WCQ1 1025 aa23.3■■□□□ 1.32
MVB12A-211ENST00000529939 CARD14Q9BXL6 1004 aa23.3■■□□□ 1.32
MVB12A-211ENST00000529939 SMARCC1Q92922 1105 aaPredicted RBP23.28■■□□□ 1.32
MVB12A-211ENST00000529939 CD2APQ9Y5K6 639 aa23.28■■□□□ 1.32
MVB12A-211ENST00000529939 EMILIN1Q9Y6C2 1016 aa23.28■■□□□ 1.32
MVB12A-211ENST00000529939 C4BP0C0L5 1744 aa23.28■■□□□ 1.32
MVB12A-211ENST00000529939 NSD3Q9BZ95 1437 aa23.27■■□□□ 1.32
MVB12A-211ENST00000529939 ITGB4P16144 1822 aa23.26■■□□□ 1.31
MVB12A-211ENST00000529939 ANKRD26Q9UPS8 1709 aa23.26■■□□□ 1.31
MVB12A-211ENST00000529939 NKX1-1Q15270 411 aaPredicted RBP23.26■■□□□ 1.31
MVB12A-211ENST00000529939 PIGBQ92521 554 aa23.24■■□□□ 1.31
MVB12A-211ENST00000529939 AMIGO3Q86WK7 504 aa23.23■■□□□ 1.31
MVB12A-211ENST00000529939 AK7Q96M32 723 aa23.23■■□□□ 1.31
MVB12A-211ENST00000529939 SPG7Q9UQ90 795 aa23.22■■□□□ 1.31
MVB12A-211ENST00000529939 WASHC2AQ641Q2 1341 aa23.22■■□□□ 1.31
MVB12A-211ENST00000529939 UBR3Q6ZT12 1888 aa23.22■■□□□ 1.31
MVB12A-211ENST00000529939 MAP2P11137 1827 aaKnown RBP23.21■■□□□ 1.31
MVB12A-211ENST00000529939 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.2■■□□□ 1.3
MVB12A-211ENST00000529939 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.19■■□□□ 1.3
MVB12A-211ENST00000529939 PPM1GO15355 546 aaPredicted RBP23.19■■□□□ 1.3
MVB12A-211ENST00000529939 POLR3GLQ9BT43 218 aa23.19■■□□□ 1.3
MVB12A-211ENST00000529939 ATP10DQ9P241 1426 aa23.18■■□□□ 1.3
MVB12A-211ENST00000529939 LOC102724428A0A0B4J2F2 783 aa23.18■■□□□ 1.3
MVB12A-211ENST00000529939 SSFA2P28290 1259 aa23.18■■□□□ 1.3
MVB12A-211ENST00000529939 SIK1P57059 783 aa23.18■■□□□ 1.3
MVB12A-211ENST00000529939 EYA1Q99502 592 aa23.18■■□□□ 1.3
MVB12A-211ENST00000529939 PHF14O94880 888 aa23.17■■□□□ 1.3
MVB12A-211ENST00000529939 LINC00116Q8NCU8 138 aa23.17■■□□□ 1.3
MVB12A-211ENST00000529939 ADCY9O60503 1353 aa23.16■■□□□ 1.3
MVB12A-211ENST00000529939 SMIM5Q71RC9 77 aa23.16■■□□□ 1.3
MVB12A-211ENST00000529939 TMOD3Q9NYL9 352 aa23.16■■□□□ 1.3
MVB12A-211ENST00000529939 POLKQ9UBT6 870 aa23.15■■□□□ 1.3
MVB12A-211ENST00000529939 PLEKHG2Q9H7P9 1386 aa23.14■■□□□ 1.3
MVB12A-211ENST00000529939 PHKG2P15735 406 aa23.14■■□□□ 1.29
MVB12A-211ENST00000529939 ASAP1Q9ULH1 1129 aa23.14■■□□□ 1.29
MVB12A-211ENST00000529939 IGSF1Q8N6C5 1336 aa23.13■■□□□ 1.29
MVB12A-211ENST00000529939 ITPK1Q13572 414 aa23.13■■□□□ 1.29
MVB12A-211ENST00000529939 IFNL2Q8IZJ0 200 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms