RNA–Protein interactions for RNA: ENST00000529813.1

USP47-208, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 3,123 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-208ENST00000529813 ARXQ96QS3 562 aa6.19□□□□□ -1.42
USP47-208ENST00000529813 CYP27B1O15528 508 aa6.18□□□□□ -1.42
USP47-208ENST00000529813 STK32BQ9NY57 414 aa6.18□□□□□ -1.42
USP47-208ENST00000529813 TMOD3Q9NYL9 352 aa6.18□□□□□ -1.42
USP47-208ENST00000529813 ABCA3Q99758 1704 aa6.18□□□□□ -1.42
USP47-208ENST00000529813 PTCD1O75127 700 aaKnown RBP6.18□□□□□ -1.42
USP47-208ENST00000529813 ZBTB7AO95365 584 aa6.18□□□□□ -1.42
USP47-208ENST00000529813 NEUROD2Q15784 382 aa6.18□□□□□ -1.42
USP47-208ENST00000529813 IFNL2Q8IZJ0 200 aa6.18□□□□□ -1.42
USP47-208ENST00000529813 ATF5Q9Y2D1 282 aaPredicted RBP6.18□□□□□ -1.42
USP47-208ENST00000529813 PCDH11XQ9BZA7 1347 aa6.18□□□□□ -1.42
USP47-208ENST00000529813 PCDH11YQ9BZA8 1340 aa6.18□□□□□ -1.42
USP47-208ENST00000529813 RTL1A6NKG5 1358 aa6.17□□□□□ -1.42
USP47-208ENST00000529813 PPP2R1AP30153 589 aa6.17□□□□□ -1.42
USP47-208ENST00000529813 CABP4P57796 275 aa6.17□□□□□ -1.42
USP47-208ENST00000529813 CAMKK2Q96RR4 588 aa6.17□□□□□ -1.42
USP47-208ENST00000529813 TFCP2L1Q9NZI6 479 aa6.17□□□□□ -1.42
USP47-208ENST00000529813 CCNL1Q9UK58 526 aaPredicted RBP6.17□□□□□ -1.42
USP47-208ENST00000529813 ZNF330Q9Y3S2 320 aaPredicted RBP6.17□□□□□ -1.42
USP47-208ENST00000529813 AKAP12Q02952 1782 aa6.17□□□□□ -1.42
USP47-208ENST00000529813 NSD2O96028 1365 aa6.17□□□□□ -1.42
USP47-208ENST00000529813 MARF1Q9Y4F3 1742 aaKnown RBP6.17□□□□□ -1.42
USP47-208ENST00000529813 PHF14O94880 888 aa6.17□□□□□ -1.42
USP47-208ENST00000529813 MON2Q7Z3U7 1717 aa6.17□□□□□ -1.42
USP47-208ENST00000529813 ZNF316A6NFI3 1004 aaPredicted RBP6.16□□□□□ -1.42
USP47-208ENST00000529813 NWD2Q9ULI1 1742 aa6.16□□□□□ -1.42
USP47-208ENST00000529813 MEGF6O75095 1541 aa6.16□□□□□ -1.42
USP47-208ENST00000529813 PRKAR2BP31323 418 aa6.16□□□□□ -1.42
USP47-208ENST00000529813 IL13P35225 146 aa6.16□□□□□ -1.42
USP47-208ENST00000529813 SMIM5Q71RC9 77 aa6.16□□□□□ -1.42
USP47-208ENST00000529813 ANO8Q9HCE9 1232 aaPredicted RBP6.16□□□□□ -1.42
USP47-208ENST00000529813 PHKG2P15735 406 aa6.15□□□□□ -1.42
USP47-208ENST00000529813 PDGFDQ9GZP0 370 aaPredicted RBP6.15□□□□□ -1.42
USP47-208ENST00000529813 ASAP1Q9ULH1 1129 aa6.15□□□□□ -1.42
USP47-208ENST00000529813 TNS2Q63HR2 1409 aa6.15□□□□□ -1.42
USP47-208ENST00000529813 TEFQ10587 303 aa6.15□□□□□ -1.43
USP47-208ENST00000529813 WDR43Q15061 677 aaKnown RBP eCLIP6.15□□□□□ -1.43
USP47-208ENST00000529813 AMOTQ4VCS5 1084 aa6.15□□□□□ -1.43
USP47-208ENST00000529813 NFATC2IPQ8NCF5 419 aa6.15□□□□□ -1.43
USP47-208ENST00000529813 PIGBQ92521 554 aa6.15□□□□□ -1.43
USP47-208ENST00000529813 RTF1Q92541 710 aaKnown RBP6.15□□□□□ -1.43
USP47-208ENST00000529813 WWC3Q9ULE0 1092 aa6.15□□□□□ -1.43
USP47-208ENST00000529813 RGPD5Q99666 1765 aa6.15□□□□□ -1.43
USP47-208ENST00000529813 ATP6V1AP38606 617 aa6.14□□□□□ -1.43
USP47-208ENST00000529813 SLC39A6Q13433 755 aa6.14□□□□□ -1.43
USP47-208ENST00000529813 MSL1Q68DK7 614 aa6.14□□□□□ -1.43
USP47-208ENST00000529813 CCDC146Q8IYE0 955 aa6.14□□□□□ -1.43
USP47-208ENST00000529813 PROM2Q8N271 834 aa6.14□□□□□ -1.43
USP47-208ENST00000529813 PIAS4Q8N2W9 510 aaPredicted RBP6.14□□□□□ -1.43
USP47-208ENST00000529813 SALL2Q9Y467 1007 aaPredicted RBP6.14□□□□□ -1.43
USP47-208ENST00000529813 LMO7Q8WWI1 1683 aa6.14□□□□□ -1.43
USP47-208ENST00000529813 NRAPQ86VF7 1730 aa6.14□□□□□ -1.43
USP47-208ENST00000529813 PLSCR1O15162 318 aa6.14□□□□□ -1.43
USP47-208ENST00000529813 MTHFSDQ2M296 383 aaKnown RBP6.14□□□□□ -1.43
USP47-208ENST00000529813 AK7Q96M32 723 aa6.14□□□□□ -1.43
USP47-208ENST00000529813 LGR6Q9HBX8 967 aa6.14□□□□□ -1.43
USP47-208ENST00000529813 IGSF1Q8N6C5 1336 aa6.14□□□□□ -1.43
USP47-208ENST00000529813 MAPK8IP3Q9UPT6 1336 aa6.14□□□□□ -1.43
USP47-208ENST00000529813 BRWD3Q6RI45 1802 aa6.14□□□□□ -1.43
USP47-208ENST00000529813 DISP2A7MBM2 1401 aa6.14□□□□□ -1.43
USP47-208ENST00000529813 HSP90AB1P08238 724 aaKnown RBP6.14□□□□□ -1.43
USP47-208ENST00000529813 DCTN1Q14203 1278 aa6.14□□□□□ -1.43
USP47-208ENST00000529813 LRRC4BQ9NT99 713 aa6.14□□□□□ -1.43
USP47-208ENST00000529813 RRP7AQ9Y3A4 280 aaKnown RBP6.14□□□□□ -1.43
USP47-208ENST00000529813 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.13□□□□□ -1.43
USP47-208ENST00000529813 KIF24Q5T7B8 1368 aa6.13□□□□□ -1.43
USP47-208ENST00000529813 ANP32CO43423 234 aa6.13□□□□□ -1.43
USP47-208ENST00000529813 SLC15A2Q16348 729 aa6.13□□□□□ -1.43
USP47-208ENST00000529813 NPM2Q86SE8 214 aaKnown RBP6.13□□□□□ -1.43
USP47-208ENST00000529813 LAS1LQ9Y4W2 734 aaKnown RBP6.13□□□□□ -1.43
USP47-208ENST00000529813 CRYBG1Q9Y4K1 1723 aa6.13□□□□□ -1.43
USP47-208ENST00000529813 TTC5Q8N0Z6 440 aa6.13□□□□□ -1.43
USP47-208ENST00000529813 SMARCC1Q92922 1105 aaPredicted RBP6.13□□□□□ -1.43
USP47-208ENST00000529813 DCAF5Q96JK2 942 aa6.13□□□□□ -1.43
USP47-208ENST00000529813 PHACTR3Q96KR7 559 aa6.13□□□□□ -1.43
USP47-208ENST00000529813 LTN1O94822 1766 aa6.13□□□□□ -1.43
USP47-208ENST00000529813 MYOM1P52179 1685 aa6.12□□□□□ -1.43
USP47-208ENST00000529813 MCM10Q7L590 875 aa6.12□□□□□ -1.43
USP47-208ENST00000529813 SPON1Q9HCB6 807 aa6.12□□□□□ -1.43
USP47-208ENST00000529813 PALLDQ8WX93 1383 aa6.12□□□□□ -1.43
USP47-208ENST00000529813 LOC102724428A0A0B4J2F2 783 aa6.12□□□□□ -1.43
USP47-208ENST00000529813 GNPATO15228 680 aa6.12□□□□□ -1.43
USP47-208ENST00000529813 SIK1P57059 783 aa6.12□□□□□ -1.43
USP47-208ENST00000529813 ZNF827Q17R98 1081 aa6.12□□□□□ -1.43
USP47-208ENST00000529813 GAS2L2Q8NHY3 880 aa6.12□□□□□ -1.43
USP47-208ENST00000529813 COL18A1P39060 1754 aa6.12□□□□□ -1.43
USP47-208ENST00000529813 RALBP1Q15311 655 aa6.12□□□□□ -1.43
USP47-208ENST00000529813 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.12□□□□□ -1.432e-7■■■□□ 15.3
USP47-208ENST00000529813 MIS18AQ9NYP9 233 aa6.12□□□□□ -1.43
USP47-208ENST00000529813 GNAT3A8MTJ3 354 aa6.11□□□□□ -1.43
USP47-208ENST00000529813 AKAP4Q5JQC9 854 aa6.11□□□□□ -1.43
USP47-208ENST00000529813 THUMPD2Q9BTF0 503 aaKnown RBP6.11□□□□□ -1.43
USP47-208ENST00000529813 NGEFQ8N5V2 710 aa6.11□□□□□ -1.43
USP47-208ENST00000529813 MRS2Q9HD23 443 aa6.11□□□□□ -1.43
USP47-208ENST00000529813 ATG3Q9NT62 314 aa6.11□□□□□ -1.43
USP47-208ENST00000529813 KIF20BQ96Q89 1820 aa6.11□□□□□ -1.43
USP47-208ENST00000529813 DCAF8L1A6NGE4 600 aa6.1□□□□□ -1.43
USP47-208ENST00000529813 RNMTO43148 476 aaKnown RBP6.1□□□□□ -1.43
USP47-208ENST00000529813 CANXP27824 592 aaKnown RBP6.1□□□□□ -1.43
USP47-208ENST00000529813 FAM9BQ8IZU0 186 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms