RNA–Protein interactions for RNA: ENST00000529577.5

SF3B2-207, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-207ENST00000529577 MTFR1LQ9H019 292 aa28.82■■■□□ 2.2
SF3B2-207ENST00000529577 KIF20BQ96Q89 1820 aa28.81■■■□□ 2.2
SF3B2-207ENST00000529577 AMPHP49418 695 aa28.8■■■□□ 2.2
SF3B2-207ENST00000529577 USHBP1Q8N6Y0 703 aa28.8■■■□□ 2.2
SF3B2-207ENST00000529577 SYT17Q9BSW7 474 aa28.8■■■□□ 2.2
SF3B2-207ENST00000529577 PRIM1P49642 420 aaKnown RBP28.79■■■□□ 2.2
SF3B2-207ENST00000529577 CARD14Q9BXL6 1004 aa28.79■■■□□ 2.2
SF3B2-207ENST00000529577 RTL1A6NKG5 1358 aa28.78■■■□□ 2.2
SF3B2-207ENST00000529577 TRIM26Q12899 539 aaPredicted RBP28.76■■■□□ 2.19
SF3B2-207ENST00000529577 ZCRB1Q8TBF4 217 aaKnown RBP28.76■■■□□ 2.19
SF3B2-207ENST00000529577 PNPLA7Q6ZV29 1317 aa28.75■■■□□ 2.19
SF3B2-207ENST00000529577 TMF1P82094 1093 aa28.75■■■□□ 2.19
SF3B2-207ENST00000529577 HSP90AB2PQ58FF8 381 aa28.75■■■□□ 2.19
SF3B2-207ENST00000529577 TOGARAM1Q9Y4F4 1720 aa28.72■■■□□ 2.19
SF3B2-207ENST00000529577 SLC27A3Q5K4L6 730 aa28.71■■■□□ 2.19
SF3B2-207ENST00000529577 ARXQ96QS3 562 aa28.71■■■□□ 2.19
SF3B2-207ENST00000529577 SYTL4Q96C24 671 aaPredicted RBP28.7■■■□□ 2.18
SF3B2-207ENST00000529577 INSRP06213 1382 aa28.7■■■□□ 2.18
SF3B2-207ENST00000529577 GOLGB1Q14789 3259 aaKnown RBP28.7■■■□□ 2.18
SF3B2-207ENST00000529577 SLC24A1O60721 1099 aa28.69■■■□□ 2.18
SF3B2-207ENST00000529577 MAP3K5Q99683 1374 aa28.68■■■□□ 2.18
SF3B2-207ENST00000529577 ANKRD26Q9UPS8 1709 aa28.67■■■□□ 2.18
SF3B2-207ENST00000529577 EMILIN1Q9Y6C2 1016 aa28.66■■■□□ 2.18
SF3B2-207ENST00000529577 NSD3Q9BZ95 1437 aa28.66■■■□□ 2.18
SF3B2-207ENST00000529577 NCAPD2Q15021 1401 aa28.65■■■□□ 2.18
SF3B2-207ENST00000529577 PKD1L3Q7Z443 1732 aa28.64■■■□□ 2.18
SF3B2-207ENST00000529577 FLT4P35916 1363 aa28.63■■■□□ 2.17
SF3B2-207ENST00000529577 ITGB4P16144 1822 aa28.62■■■□□ 2.17
SF3B2-207ENST00000529577 CYP27B1O15528 508 aa28.62■■■□□ 2.17
SF3B2-207ENST00000529577 TAF1LQ8IZX4 1826 aa28.62■■■□□ 2.17
SF3B2-207ENST00000529577 C5P01031 1676 aa28.61■■■□□ 2.17
SF3B2-207ENST00000529577 DCAF8L1A6NGE4 600 aa28.61■■■□□ 2.17
SF3B2-207ENST00000529577 CCNL1Q9UK58 526 aaPredicted RBP28.6■■■□□ 2.17
SF3B2-207ENST00000529577 CGNL1Q0VF96 1302 aa28.6■■■□□ 2.17
SF3B2-207ENST00000529577 KIF24Q5T7B8 1368 aa28.6■■■□□ 2.17
SF3B2-207ENST00000529577 CHD4Q14839 1912 aa28.59■■■□□ 2.17
SF3B2-207ENST00000529577 COL23A1Q86Y22 540 aaPredicted RBP28.59■■■□□ 2.17
SF3B2-207ENST00000529577 SLC16A10Q8TF71 515 aa28.59■■■□□ 2.17
SF3B2-207ENST00000529577 TFCP2L1Q9NZI6 479 aa28.59■■■□□ 2.17
SF3B2-207ENST00000529577 SMG6Q86US8 1419 aaKnown RBP28.59■■■□□ 2.17
SF3B2-207ENST00000529577 MAP2P11137 1827 aaKnown RBP28.58■■■□□ 2.17
SF3B2-207ENST00000529577 ZNF784Q8NCA9 323 aaPredicted RBP28.58■■■□□ 2.17
SF3B2-207ENST00000529577 RAPGEF4Q8WZA2 1011 aa28.58■■■□□ 2.17
SF3B2-207ENST00000529577 TATP17735 454 aaPredicted RBP28.57■■■□□ 2.16
SF3B2-207ENST00000529577 AMIGO3Q86WK7 504 aa28.57■■■□□ 2.16
SF3B2-207ENST00000529577 NLGN2Q8NFZ4 835 aa28.57■■■□□ 2.16
SF3B2-207ENST00000529577 PCDH11XQ9BZA7 1347 aa28.54■■■□□ 2.16
SF3B2-207ENST00000529577 PCDH11YQ9BZA8 1340 aa28.54■■■□□ 2.16
SF3B2-207ENST00000529577 CDCA8Q53HL2 280 aa28.54■■■□□ 2.16
SF3B2-207ENST00000529577 PALLDQ8WX93 1383 aa28.51■■■□□ 2.16
SF3B2-207ENST00000529577 SMIM5Q71RC9 77 aa28.51■■■□□ 2.15
SF3B2-207ENST00000529577 MPRIPQ6WCQ1 1025 aa28.5■■■□□ 2.15
SF3B2-207ENST00000529577 EYA1Q99502 592 aa28.5■■■□□ 2.15
SF3B2-207ENST00000529577 POLKQ9UBT6 870 aa28.5■■■□□ 2.15
SF3B2-207ENST00000529577 C4BP0C0L5 1744 aa28.49■■■□□ 2.15
SF3B2-207ENST00000529577 WASHC2AQ641Q2 1341 aa28.49■■■□□ 2.15
SF3B2-207ENST00000529577 NKX1-1Q15270 411 aaPredicted RBP28.48■■■□□ 2.15
SF3B2-207ENST00000529577 MSL1Q68DK7 614 aa28.48■■■□□ 2.15
SF3B2-207ENST00000529577 KLHL34Q8N239 644 aa28.48■■■□□ 2.15
SF3B2-207ENST00000529577 UBR3Q6ZT12 1888 aa28.47■■■□□ 2.15
SF3B2-207ENST00000529577 POLD1P28340 1107 aa28.47■■■□□ 2.15
SF3B2-207ENST00000529577 PIGBQ92521 554 aa28.47■■■□□ 2.15
SF3B2-207ENST00000529577 TIMELESSQ9UNS1 1208 aa28.47■■■□□ 2.15
SF3B2-207ENST00000529577 PPM1GO15355 546 aaPredicted RBP28.46■■■□□ 2.15
SF3B2-207ENST00000529577 YBX3P16989 372 aaKnown RBP eCLIP28.44■■■□□ 2.14
SF3B2-207ENST00000529577 GPR162Q16538 588 aa28.43■■■□□ 2.14
SF3B2-207ENST00000529577 MSH5O43196 834 aa28.41■■■□□ 2.14
SF3B2-207ENST00000529577 EIF4A2Q14240 407 aaKnown RBP28.41■■■□□ 2.14
SF3B2-207ENST00000529577 PCGF6Q9BYE7 350 aa28.41■■■□□ 2.14
SF3B2-207ENST00000529577 LINC00116Q8NCU8 138 aa28.38■■■□□ 2.13
SF3B2-207ENST00000529577 CLSPNQ9HAW4 1339 aa28.38■■■□□ 2.13
SF3B2-207ENST00000529577 HSPA5P11021 654 aaKnown RBP28.37■■■□□ 2.13
SF3B2-207ENST00000529577 PHKG2P15735 406 aa28.37■■■□□ 2.13
SF3B2-207ENST00000529577 TNNT2P45379 298 aaPredicted RBP28.37■■■□□ 2.13
SF3B2-207ENST00000529577 ITPK1Q13572 414 aa28.37■■■□□ 2.13
SF3B2-207ENST00000529577 ASAP1Q9ULH1 1129 aa28.37■■■□□ 2.13
SF3B2-207ENST00000529577 PELP1Q8IZL8 1130 aaKnown RBP28.36■■■□□ 2.13
SF3B2-207ENST00000529577 POLR3GLQ9BT43 218 aa28.36■■■□□ 2.13
SF3B2-207ENST00000529577 SPG7Q9UQ90 795 aa28.35■■■□□ 2.13
SF3B2-207ENST00000529577 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.34■■■□□ 2.13
SF3B2-207ENST00000529577 SMARCC1Q92922 1105 aaPredicted RBP28.33■■■□□ 2.13
SF3B2-207ENST00000529577 LOC102724428A0A0B4J2F2 783 aa28.32■■■□□ 2.12
SF3B2-207ENST00000529577 SIK1P57059 783 aa28.32■■■□□ 2.12
SF3B2-207ENST00000529577 SLC4A9Q96Q91 983 aa28.32■■■□□ 2.12
SF3B2-207ENST00000529577 PANK3Q9H999 370 aa28.32■■■□□ 2.12
SF3B2-207ENST00000529577 ATG3Q9NT62 314 aa28.32■■■□□ 2.12
SF3B2-207ENST00000529577 IGSF1Q8N6C5 1336 aa28.32■■■□□ 2.12
SF3B2-207ENST00000529577 PHF14O94880 888 aa28.31■■■□□ 2.12
SF3B2-207ENST00000529577 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.3■■■□□ 2.12
SF3B2-207ENST00000529577 KDRP35968 1356 aa28.29■■■□□ 2.12
SF3B2-207ENST00000529577 IFNL2Q8IZJ0 200 aa28.29■■■□□ 2.12
SF3B2-207ENST00000529577 FLAD1Q8NFF5 587 aa28.28■■■□□ 2.12
SF3B2-207ENST00000529577 AK7Q96M32 723 aa28.28■■■□□ 2.12
SF3B2-207ENST00000529577 KDM6AO15550 1401 aaPredicted RBP28.27■■■□□ 2.12
SF3B2-207ENST00000529577 TMOD3Q9NYL9 352 aa28.27■■■□□ 2.12
SF3B2-207ENST00000529577 CD2APQ9Y5K6 639 aa28.27■■■□□ 2.12
SF3B2-207ENST00000529577 C1QTNF8P60827 252 aa28.26■■■□□ 2.11
SF3B2-207ENST00000529577 EIF4G2P78344 907 aaKnown RBP eCLIP28.26■■■□□ 2.11
SF3B2-207ENST00000529577 COL5A3P25940 1745 aaPredicted RBP28.26■■■□□ 2.11
SF3B2-207ENST00000529577 KIAA1551Q9HCM1 1747 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms