RNA–Protein interactions for RNA: ENST00000529506.5

CMTM1-213, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-213ENST00000529506 SLC27A3Q5K4L6 730 aa24.46■■□□□ 1.51
CMTM1-213ENST00000529506 PRIM1P49642 420 aaKnown RBP24.45■■□□□ 1.5
CMTM1-213ENST00000529506 SYTL4Q96C24 671 aaPredicted RBP24.45■■□□□ 1.5
CMTM1-213ENST00000529506 DCAF8L1A6NGE4 600 aa24.44■■□□□ 1.5
CMTM1-213ENST00000529506 HMGB2P26583 209 aaKnown RBP24.44■■□□□ 1.5
CMTM1-213ENST00000529506 MYOM1P52179 1685 aa24.43■■□□□ 1.5
CMTM1-213ENST00000529506 PPM1GO15355 546 aaPredicted RBP24.43■■□□□ 1.5
CMTM1-213ENST00000529506 RGPD2P0DJD1 1756 aa24.43■■□□□ 1.5
CMTM1-213ENST00000529506 BTAF1O14981 1849 aa24.42■■□□□ 1.5
CMTM1-213ENST00000529506 USHBP1Q8N6Y0 703 aa24.42■■□□□ 1.5
CMTM1-213ENST00000529506 EMILIN1Q9Y6C2 1016 aa24.42■■□□□ 1.5
CMTM1-213ENST00000529506 WASHC2AQ641Q2 1341 aa24.41■■□□□ 1.5
CMTM1-213ENST00000529506 MEGF6O75095 1541 aa24.4■■□□□ 1.5
CMTM1-213ENST00000529506 ZBTB7AO95365 584 aa24.39■■□□□ 1.49
CMTM1-213ENST00000529506 PCDH11XQ9BZA7 1347 aa24.38■■□□□ 1.49
CMTM1-213ENST00000529506 PCDH11YQ9BZA8 1340 aa24.38■■□□□ 1.49
CMTM1-213ENST00000529506 MTFR1LQ9H019 292 aa24.38■■□□□ 1.49
CMTM1-213ENST00000529506 PANK3Q9H999 370 aa24.38■■□□□ 1.49
CMTM1-213ENST00000529506 MAP2P11137 1827 aaKnown RBP24.38■■□□□ 1.49
CMTM1-213ENST00000529506 POLKQ9UBT6 870 aa24.37■■□□□ 1.49
CMTM1-213ENST00000529506 ATF5Q9Y2D1 282 aaPredicted RBP24.37■■□□□ 1.49
CMTM1-213ENST00000529506 PDGFDQ9GZP0 370 aaPredicted RBP24.36■■□□□ 1.49
CMTM1-213ENST00000529506 LRRC4BQ9NT99 713 aa24.36■■□□□ 1.49
CMTM1-213ENST00000529506 CASZ1Q86V15 1759 aa24.35■■□□□ 1.49
CMTM1-213ENST00000529506 SPG7Q9UQ90 795 aa24.35■■□□□ 1.49
CMTM1-213ENST00000529506 SLC16A10Q8TF71 515 aa24.34■■□□□ 1.49
CMTM1-213ENST00000529506 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.33■■□□□ 1.49
CMTM1-213ENST00000529506 NSD2O96028 1365 aa24.32■■□□□ 1.48
CMTM1-213ENST00000529506 TNNT2P45379 298 aaPredicted RBP24.32■■□□□ 1.48
CMTM1-213ENST00000529506 AKT1S1Q96B36 256 aa24.32■■□□□ 1.48
CMTM1-213ENST00000529506 EYA1Q99502 592 aa24.32■■□□□ 1.48
CMTM1-213ENST00000529506 PTGER2P43116 358 aa24.31■■□□□ 1.48
CMTM1-213ENST00000529506 TFCP2L1Q9NZI6 479 aa24.31■■□□□ 1.48
CMTM1-213ENST00000529506 KNSTRNQ9Y448 316 aa24.31■■□□□ 1.48
CMTM1-213ENST00000529506 CCNL1Q9UK58 526 aaPredicted RBP24.3■■□□□ 1.48
CMTM1-213ENST00000529506 SHANK3Q9BYB0 1731 aa24.3■■□□□ 1.48
CMTM1-213ENST00000529506 CYP27B1O15528 508 aa24.29■■□□□ 1.48
CMTM1-213ENST00000529506 ZNF827Q17R98 1081 aa24.29■■□□□ 1.48
CMTM1-213ENST00000529506 DOT1LQ8TEK3 1739 aa24.29■■□□□ 1.48
CMTM1-213ENST00000529506 MPRIPQ6WCQ1 1025 aa24.28■■□□□ 1.48
CMTM1-213ENST00000529506 MORC1Q86VD1 984 aa24.28■■□□□ 1.48
CMTM1-213ENST00000529506 SMARCC1Q92922 1105 aaPredicted RBP24.28■■□□□ 1.48
CMTM1-213ENST00000529506 NKX1-1Q15270 411 aaPredicted RBP24.27■■□□□ 1.48
CMTM1-213ENST00000529506 PAPPAQ13219 1627 aa24.27■■□□□ 1.48
CMTM1-213ENST00000529506 ANKRD26Q9UPS8 1709 aa24.27■■□□□ 1.48
CMTM1-213ENST00000529506 NCAPD2Q15021 1401 aa24.27■■□□□ 1.48
CMTM1-213ENST00000529506 EIF4A2Q14240 407 aaKnown RBP24.25■■□□□ 1.47
CMTM1-213ENST00000529506 IFNL2Q8IZJ0 200 aa24.25■■□□□ 1.47
CMTM1-213ENST00000529506 ARXQ96QS3 562 aa24.25■■□□□ 1.47
CMTM1-213ENST00000529506 POLD1P28340 1107 aa24.24■■□□□ 1.47
CMTM1-213ENST00000529506 SGIP1Q9BQI5 828 aa24.24■■□□□ 1.47
CMTM1-213ENST00000529506 PLEKHG2Q9H7P9 1386 aa24.24■■□□□ 1.47
CMTM1-213ENST00000529506 LY75O60449 1722 aa24.24■■□□□ 1.47
CMTM1-213ENST00000529506 KCNQ4P56696 695 aa24.23■■□□□ 1.47
CMTM1-213ENST00000529506 SYT17Q9BSW7 474 aa24.23■■□□□ 1.47
CMTM1-213ENST00000529506 FLAD1Q8NFF5 587 aa24.21■■□□□ 1.47
CMTM1-213ENST00000529506 FHDC1Q9C0D6 1143 aaPredicted RBP24.21■■□□□ 1.47
CMTM1-213ENST00000529506 PNPLA7Q6ZV29 1317 aa24.2■■□□□ 1.46
CMTM1-213ENST00000529506 QSER1Q2KHR3 1735 aa24.2■■□□□ 1.46
CMTM1-213ENST00000529506 PALLDQ8WX93 1383 aa24.19■■□□□ 1.46
CMTM1-213ENST00000529506 PKD1L3Q7Z443 1732 aa24.19■■□□□ 1.46
CMTM1-213ENST00000529506 MSH5O43196 834 aa24.18■■□□□ 1.46
CMTM1-213ENST00000529506 HSP90AB1P08238 724 aaKnown RBP24.18■■□□□ 1.46
CMTM1-213ENST00000529506 PHKG2P15735 406 aa24.18■■□□□ 1.46
CMTM1-213ENST00000529506 AMOTQ4VCS5 1084 aa24.18■■□□□ 1.46
CMTM1-213ENST00000529506 PLEKHO1Q53GL0 409 aaPredicted RBP24.18■■□□□ 1.46
CMTM1-213ENST00000529506 PIGBQ92521 554 aa24.18■■□□□ 1.46
CMTM1-213ENST00000529506 TMOD3Q9NYL9 352 aa24.18■■□□□ 1.46
CMTM1-213ENST00000529506 IGSF1Q8N6C5 1336 aa24.17■■□□□ 1.46
CMTM1-213ENST00000529506 YY1P25490 414 aa24.17■■□□□ 1.46
CMTM1-213ENST00000529506 KIF7Q2M1P5 1343 aa24.15■■□□□ 1.46
CMTM1-213ENST00000529506 ITGB4P16144 1822 aa24.14■■□□□ 1.46
CMTM1-213ENST00000529506 MAP3K5Q99683 1374 aa24.14■■□□□ 1.45
CMTM1-213ENST00000529506 ERVV-2B6SEH9 535 aa24.13■■□□□ 1.45
CMTM1-213ENST00000529506 AMER1Q5JTC6 1135 aaPredicted RBP24.13■■□□□ 1.45
CMTM1-213ENST00000529506 COL23A1Q86Y22 540 aaPredicted RBP24.13■■□□□ 1.45
CMTM1-213ENST00000529506 DCAF5Q96JK2 942 aa24.12■■□□□ 1.45
CMTM1-213ENST00000529506 AK7Q96M32 723 aa24.11■■□□□ 1.45
CMTM1-213ENST00000529506 LOC102724428A0A0B4J2F2 783 aa24.1■■□□□ 1.45
CMTM1-213ENST00000529506 SIK1P57059 783 aa24.1■■□□□ 1.45
CMTM1-213ENST00000529506 PER1O15534 1290 aaPredicted RBP24.08■■□□□ 1.45
CMTM1-213ENST00000529506 C1orf141Q5JVX7 400 aa24.08■■□□□ 1.45
CMTM1-213ENST00000529506 ZNF530Q6P9A1 599 aaPredicted RBP24.08■■□□□ 1.45
CMTM1-213ENST00000529506 C5P01031 1676 aa24.08■■□□□ 1.44
CMTM1-213ENST00000529506 SULT6B1Q6IMI4 303 aa24.07■■□□□ 1.44
CMTM1-213ENST00000529506 KLHL34Q8N239 644 aa24.07■■□□□ 1.44
CMTM1-213ENST00000529506 ASAP1Q9ULH1 1129 aa24.07■■□□□ 1.44
CMTM1-213ENST00000529506 TOGARAM1Q9Y4F4 1720 aa24.07■■□□□ 1.44
CMTM1-213ENST00000529506 TAF1LQ8IZX4 1826 aa24.06■■□□□ 1.44
CMTM1-213ENST00000529506 TUBGCP6Q96RT7 1819 aa24.06■■□□□ 1.44
CMTM1-213ENST00000529506 IL13P35225 146 aa24.06■■□□□ 1.44
CMTM1-213ENST00000529506 ATP6V1AP38606 617 aa24.06■■□□□ 1.44
CMTM1-213ENST00000529506 MTHFSP49914 203 aa24.06■■□□□ 1.44
CMTM1-213ENST00000529506 COL24A1Q17RW2 1714 aa24.05■■□□□ 1.44
CMTM1-213ENST00000529506 CABP4P57796 275 aa24.05■■□□□ 1.44
CMTM1-213ENST00000529506 ATG3Q9NT62 314 aa24.05■■□□□ 1.44
CMTM1-213ENST00000529506 GPR162Q16538 588 aa24.04■■□□□ 1.44
CMTM1-213ENST00000529506 SSFA2P28290 1259 aa24.03■■□□□ 1.44
CMTM1-213ENST00000529506 CC2D1BQ5T0F9 858 aaKnown RBP24.02■■□□□ 1.44
CMTM1-213ENST00000529506 AEBP1Q8IUX7 1158 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms