RNA–Protein interactions for RNA: ENST00000529183.5

CASP4-206, Transcript of caspase 4, humanhuman

TSL 5

Gene CASP4, Length 612 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-206ENST00000529183 SYCP2Q9BX26 1530 aa8.1□□□□□ -1.11
CASP4-206ENST00000529183 HSPA1LP34931 641 aa8.1□□□□□ -1.11
CASP4-206ENST00000529183 RETREG3Q86VR2 466 aa8.1□□□□□ -1.11
CASP4-206ENST00000529183 NPAS3Q8IXF0 933 aa8.1□□□□□ -1.11
CASP4-206ENST00000529183 CCDC102AQ96A19 550 aa8.1□□□□□ -1.11
CASP4-206ENST00000529183 UNC93B1Q9H1C4 597 aa8.1□□□□□ -1.11
CASP4-206ENST00000529183 FAM217BQ9NTX9 383 aaPredicted RBP8.1□□□□□ -1.11
CASP4-206ENST00000529183 CEP170BQ9Y4F5 1589 aaPredicted RBP8.1□□□□□ -1.11
CASP4-206ENST00000529183 ARHGAP35Q9NRY4 1499 aa8.09□□□□□ -1.11
CASP4-206ENST00000529183 TIMP2P16035 220 aa8.09□□□□□ -1.11
CASP4-206ENST00000529183 UBTFP17480 764 aaKnown RBP8.09□□□□□ -1.11
CASP4-206ENST00000529183 GSK3AP49840 483 aa8.09□□□□□ -1.11
CASP4-206ENST00000529183 NNTQ13423 1086 aa8.09□□□□□ -1.11
CASP4-206ENST00000529183 SUZ12Q15022 739 aaKnown RBP8.09□□□□□ -1.11
CASP4-206ENST00000529183 SAMD9LQ8IVG5 1584 aa8.09□□□□□ -1.11
CASP4-206ENST00000529183 POLR1AO95602 1720 aaPredicted RBP8.09□□□□□ -1.11
CASP4-206ENST00000529183 MROH2AA6NES4 1674 aa8.08□□□□□ -1.12
CASP4-206ENST00000529183 C6orf229H3BNL8 230 aa8.08□□□□□ -1.12
CASP4-206ENST00000529183 CCNYL3P0C7X3 344 aa8.08□□□□□ -1.12
CASP4-206ENST00000529183 NDUFV2P19404 249 aa8.08□□□□□ -1.12
CASP4-206ENST00000529183 MRPL14Q6P1L8 145 aaKnown RBP8.08□□□□□ -1.12
CASP4-206ENST00000529183 TROQ12816 1431 aaPredicted RBP8.08□□□□□ -1.12
CASP4-206ENST00000529183 REREQ9P2R6 1566 aa8.08□□□□□ -1.12
CASP4-206ENST00000529183 SETD1BQ9UPS6 1966 aaKnown RBP8.08□□□□□ -1.12
CASP4-206ENST00000529183 CLIP1P30622 1438 aa8.07□□□□□ -1.12
CASP4-206ENST00000529183 FDX1P10109 184 aa8.07□□□□□ -1.12
CASP4-206ENST00000529183 MS4A1P11836 297 aa8.07□□□□□ -1.12
CASP4-206ENST00000529183 SETD1AO15047 1707 aaKnown RBP8.06□□□□□ -1.12
CASP4-206ENST00000529183 KCTD17Q8N5Z5 321 aa8.06□□□□□ -1.12
CASP4-206ENST00000529183 KLF16Q9BXK1 252 aaPredicted RBP8.06□□□□□ -1.12
CASP4-206ENST00000529183 AGLP35573 1532 aa8.05□□□□□ -1.12
CASP4-206ENST00000529183 WDR4P57081 412 aaKnown RBP8.05□□□□□ -1.12
CASP4-206ENST00000529183 GGT6Q6P531 493 aa8.05□□□□□ -1.12
CASP4-206ENST00000529183 ZNF511Q8NB15 262 aa8.05□□□□□ -1.12
CASP4-206ENST00000529183 ZFAND3Q9H8U3 227 aa8.05□□□□□ -1.12
CASP4-206ENST00000529183 IQSEC2Q5JU85 1478 aa8.05□□□□□ -1.12
CASP4-206ENST00000529183 NEURL4Q96JN8 1562 aa8.05□□□□□ -1.12
CASP4-206ENST00000529183 ATP7AQ04656 1500 aa8.04□□□□□ -1.12
CASP4-206ENST00000529183 HNRNPMP52272 730 aaKnown RBP eCLIP8.04□□□□□ -1.12
CASP4-206ENST00000529183 NUTM1Q86Y26 1132 aa8.04□□□□□ -1.12
CASP4-206ENST00000529183 GPCPD1Q9NPB8 672 aa8.04□□□□□ -1.12
CASP4-206ENST00000529183 EVA1BQ9NVM1 165 aa8.04□□□□□ -1.12
CASP4-206ENST00000529183 ZMYM3Q14202 1370 aa8.04□□□□□ -1.12
CASP4-206ENST00000529183 MLH3Q9UHC1 1453 aa8.04□□□□□ -1.12
CASP4-206ENST00000529183 FMN1Q68DA7 1419 aa8.03□□□□□ -1.12
CASP4-206ENST00000529183 DNMT1P26358 1616 aaKnown RBP8.03□□□□□ -1.12
CASP4-206ENST00000529183 STRCP1A6NGW2 1772 aa8.03□□□□□ -1.12
CASP4-206ENST00000529183 ADGBQ8N7X0 1667 aa8.03□□□□□ -1.12
CASP4-206ENST00000529183 INO80Q9ULG1 1556 aaPredicted RBP8.03□□□□□ -1.12
CASP4-206ENST00000529183 MOXD2PA6NHM9 499 aa8.03□□□□□ -1.12
CASP4-206ENST00000529183 VSIG8P0DPA2 414 aa8.03□□□□□ -1.12
CASP4-206ENST00000529183 C6orf118Q5T5N4 469 aa8.03□□□□□ -1.12
CASP4-206ENST00000529183 NR3C2P08235 984 aa8.02□□□□□ -1.13
CASP4-206ENST00000529183 KCNH2Q12809 1159 aa8.02□□□□□ -1.13
CASP4-206ENST00000529183 PTPRNQ16849 979 aa8.02□□□□□ -1.13
CASP4-206ENST00000529183 PRR7Q8TB68 274 aa8.02□□□□□ -1.13
CASP4-206ENST00000529183 SPIRE2Q8WWL2 714 aa8.02□□□□□ -1.13
CASP4-206ENST00000529183 FOXJ1Q92949 421 aa8.02□□□□□ -1.13
CASP4-206ENST00000529183 ALKQ9UM73 1620 aa8.02□□□□□ -1.13
CASP4-206ENST00000529183 PTPRKQ15262 1439 aa8.02□□□□□ -1.13
CASP4-206ENST00000529183 CNTLNQ9NXG0 1405 aa8.02□□□□□ -1.13
CASP4-206ENST00000529183 KRT76Q01546 638 aa8.01□□□□□ -1.13
CASP4-206ENST00000529183 ITPKCQ96DU7 683 aa8.01□□□□□ -1.13
CASP4-206ENST00000529183 CDK11AQ9UQ88 783 aaPredicted RBP8.01□□□□□ -1.13
CASP4-206ENST00000529183 PLXNC1O60486 1568 aa8.01□□□□□ -1.13
CASP4-206ENST00000529183 SPAG9O60271 1321 aaKnown RBP8.01□□□□□ -1.13
CASP4-206ENST00000529183 MINK1Q8N4C8 1332 aaPredicted RBP8.01□□□□□ -1.13
CASP4-206ENST00000529183 TCOF1Q13428 1488 aaKnown RBP8□□□□□ -1.13
CASP4-206ENST00000529183 ADH1CP00326 375 aa8□□□□□ -1.13
CASP4-206ENST00000529183 GPR161Q8N6U8 529 aaKnown RBP8□□□□□ -1.13
CASP4-206ENST00000529183 KDM2AQ9Y2K7 1162 aa8□□□□□ -1.13
CASP4-206ENST00000529183 EEA1Q15075 1411 aa8□□□□□ -1.13
CASP4-206ENST00000529183 A2MP01023 1474 aa8□□□□□ -1.13
CASP4-206ENST00000529183 PLA2R1Q13018 1463 aa8□□□□□ -1.13
CASP4-206ENST00000529183 PPFIA3O75145 1194 aa7.99□□□□□ -1.13
CASP4-206ENST00000529183 ZIC2O95409 532 aaPredicted RBP7.99□□□□□ -1.13
CASP4-206ENST00000529183 VARSP26640 1264 aaKnown RBP7.99□□□□□ -1.13
CASP4-206ENST00000529183 CLCN1P35523 988 aa7.99□□□□□ -1.13
CASP4-206ENST00000529183 SCARF1Q14162 830 aa7.99□□□□□ -1.13
CASP4-206ENST00000529183 NPATQ14207 1427 aa7.99□□□□□ -1.13
CASP4-206ENST00000529183 ARID5BQ14865 1188 aa7.99□□□□□ -1.13
CASP4-206ENST00000529183 C4orf48Q5BLP8 95 aa7.99□□□□□ -1.13
CASP4-206ENST00000529183 FBXO31Q5XUX0 539 aaPredicted RBP7.99□□□□□ -1.13
CASP4-206ENST00000529183 VSIG10Q8N0Z9 540 aa7.99□□□□□ -1.13
CASP4-206ENST00000529183 MAP10Q9P2G4 905 aa7.99□□□□□ -1.13
CASP4-206ENST00000529183 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.98□□□□□ -1.13
CASP4-206ENST00000529183 VWDEQ8N2E2 1590 aa7.98□□□□□ -1.13
CASP4-206ENST00000529183 A2ML1A8K2U0 1454 aa7.98□□□□□ -1.13
CASP4-206ENST00000529183 SHANK2Q9UPX8 1470 aa7.98□□□□□ -1.13
CASP4-206ENST00000529183 IQGAP1P46940 1657 aa7.98□□□□□ -1.13
CASP4-206ENST00000529183 ZNF644Q9H582 1327 aaPredicted RBP7.98□□□□□ -1.13
CASP4-206ENST00000529183 CFAP65Q6ZU64 1925 aaKnown RBP7.97□□□□□ -1.13
CASP4-206ENST00000529183 KCNMA1Q12791 1236 aa7.97□□□□□ -1.13
CASP4-206ENST00000529183 DNMT3LQ9UJW3 386 aa7.97□□□□□ -1.13
CASP4-206ENST00000529183 RNF17Q9BXT8 1623 aaKnown RBP7.96□□□□□ -1.13
CASP4-206ENST00000529183 CCDC18Q5T9S5 1454 aa7.96□□□□□ -1.13
CASP4-206ENST00000529183 CEP152O94986 1710 aa7.96□□□□□ -1.14
CASP4-206ENST00000529183 MAN1A2O60476 641 aa7.96□□□□□ -1.14
CASP4-206ENST00000529183 TOM1O60784 492 aa7.96□□□□□ -1.14
CASP4-206ENST00000529183 SSTR3P32745 418 aaPredicted RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms