RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 PLEKHG2Q9H7P9 1386 aa15.22■□□□□ 0.03
CAPN1-217ENST00000529133 RBM6P78332 1123 aaKnown RBP15.21■□□□□ 0.03
CAPN1-217ENST00000529133 CCDC146Q8IYE0 955 aa15.21■□□□□ 0.03
CAPN1-217ENST00000529133 CDCA7Q9BWT1 371 aaPredicted RBP15.21■□□□□ 0.03
CAPN1-217ENST00000529133 LRRC37A3O60309 1634 aa15.21■□□□□ 0.02
CAPN1-217ENST00000529133 PNNQ9H307 717 aaKnown RBP15.2■□□□□ 0.02
CAPN1-217ENST00000529133 PKD1L3Q7Z443 1732 aa15.2■□□□□ 0.02
CAPN1-217ENST00000529133 TNS2Q63HR2 1409 aa15.19■□□□□ 0.02
CAPN1-217ENST00000529133 ONECUT3O60422 494 aaPredicted RBP15.19■□□□□ 0.02
CAPN1-217ENST00000529133 RUNDC1Q96C34 613 aa15.19■□□□□ 0.02
CAPN1-217ENST00000529133 PHACTR3Q96KR7 559 aa15.19■□□□□ 0.02
CAPN1-217ENST00000529133 MAPK8IP3Q9UPT6 1336 aa15.18■□□□□ 0.02
CAPN1-217ENST00000529133 RXRBP28702 533 aa15.18■□□□□ 0.02
CAPN1-217ENST00000529133 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.18■□□□□ 0.022e-6■■□□□ 11.9
CAPN1-217ENST00000529133 MTHFSDQ2M296 383 aaKnown RBP15.17■□□□□ 0.02
CAPN1-217ENST00000529133 AMOTQ4VCS5 1084 aa15.17■□□□□ 0.02
CAPN1-217ENST00000529133 PLEKHO1Q53GL0 409 aaPredicted RBP15.17■□□□□ 0.02
CAPN1-217ENST00000529133 SPG7Q9UQ90 795 aa15.17■□□□□ 0.02
CAPN1-217ENST00000529133 RGS12O14924 1447 aa15.17■□□□□ 0.02
CAPN1-217ENST00000529133 A0A0G2JS52 829 aa15.16■□□□□ 0.02
CAPN1-217ENST00000529133 NEFMP07197 916 aa15.16■□□□□ 0.02
CAPN1-217ENST00000529133 MYT1Q01538 1121 aa15.16■□□□□ 0.02
CAPN1-217ENST00000529133 DDB1Q16531 1140 aa15.16■□□□□ 0.02
CAPN1-217ENST00000529133 SEPT12Q8IYM1 358 aa15.16■□□□□ 0.02
CAPN1-217ENST00000529133 ZCRB1Q8TBF4 217 aaKnown RBP15.16■□□□□ 0.02
CAPN1-217ENST00000529133 SHANK3Q9BYB0 1731 aa15.16■□□□□ 0.02
CAPN1-217ENST00000529133 ZNF530Q6P9A1 599 aaPredicted RBP15.15■□□□□ 0.02
CAPN1-217ENST00000529133 GAS2L2Q8NHY3 880 aa15.15■□□□□ 0.02
CAPN1-217ENST00000529133 PCDH11XQ9BZA7 1347 aa15.15■□□□□ 0.02
CAPN1-217ENST00000529133 PCDH11YQ9BZA8 1340 aa15.15■□□□□ 0.02
CAPN1-217ENST00000529133 EXOC5O00471 708 aa15.14■□□□□ 0.01
CAPN1-217ENST00000529133 APAF1O14727 1248 aa15.14■□□□□ 0.01
CAPN1-217ENST00000529133 NFE2L2Q16236 605 aa15.14■□□□□ 0.01
CAPN1-217ENST00000529133 CYP27B1O15528 508 aa15.13■□□□□ 0.01
CAPN1-217ENST00000529133 PHKG2P15735 406 aa15.12■□□□□ 0.01
CAPN1-217ENST00000529133 TMPOP42166 694 aaKnown RBP15.12■□□□□ 0.01
CAPN1-217ENST00000529133 DDX54Q8TDD1 881 aaKnown RBP15.12■□□□□ 0.01
CAPN1-217ENST00000529133 RRP7AQ9Y3A4 280 aaKnown RBP15.12■□□□□ 0.01
CAPN1-217ENST00000529133 MAP3K5Q99683 1374 aa15.11■□□□□ 0.01
CAPN1-217ENST00000529133 SENP3-EIF4A1A0A087X0R7 540 aa15.11■□□□□ 0.01
CAPN1-217ENST00000529133 AKAP4Q5JQC9 854 aa15.11■□□□□ 0.01
CAPN1-217ENST00000529133 C1orf141Q5JVX7 400 aa15.11■□□□□ 0.01
CAPN1-217ENST00000529133 IFNL2Q8IZJ0 200 aa15.11■□□□□ 0.01
CAPN1-217ENST00000529133 MARCH10Q8NA82 808 aaPredicted RBP15.11■□□□□ 0.01
CAPN1-217ENST00000529133 PDE3BQ13370 1112 aa15.1■□□□□ 0.01
CAPN1-217ENST00000529133 KDM6AO15550 1401 aaPredicted RBP15.09■□□□□ 0.01
CAPN1-217ENST00000529133 RIPK4P57078 832 aa15.09■□□□□ 0.01
CAPN1-217ENST00000529133 NEUROD2Q15784 382 aa15.09■□□□□ 0.01
CAPN1-217ENST00000529133 GNAT3A8MTJ3 354 aa15.08■□□□□ 0
CAPN1-217ENST00000529133 NKX1-1Q15270 411 aaPredicted RBP15.08■□□□□ 0
CAPN1-217ENST00000529133 KRT27Q7Z3Y8 459 aa15.08■□□□□ 0
CAPN1-217ENST00000529133 ADAMTS7Q9UKP4 1686 aa15.08■□□□□ 0
CAPN1-217ENST00000529133 BRWD3Q6RI45 1802 aa15.08■□□□□ 0
CAPN1-217ENST00000529133 HTATSF1O43719 755 aaKnown RBP15.07■□□□□ 0
CAPN1-217ENST00000529133 HSP90AB1P08238 724 aaKnown RBP15.07■□□□□ 0
CAPN1-217ENST00000529133 MPRIPQ6WCQ1 1025 aa15.07■□□□□ 0
CAPN1-217ENST00000529133 TRIM35Q9UPQ4 493 aa15.07■□□□□ 0
CAPN1-217ENST00000529133 LMOD3Q0VAK6 560 aa15.06■□□□□ 0
CAPN1-217ENST00000529133 NCBP3Q53F19 620 aaKnown RBP15.06■□□□□ 0
CAPN1-217ENST00000529133 IL17REQ8NFR9 667 aa15.06■□□□□ 0
CAPN1-217ENST00000529133 DCAF5Q96JK2 942 aa15.06■□□□□ 0
CAPN1-217ENST00000529133 BCL9O00512 1426 aa15.06■□□□□ 0
CAPN1-217ENST00000529133 TOGARAM1Q9Y4F4 1720 aa15.06■□□□□ 0
CAPN1-217ENST00000529133 RNMTO43148 476 aaKnown RBP15.05■□□□□ -0
CAPN1-217ENST00000529133 HNRNPUQ00839 825 aaKnown RBP eCLIP15.05■□□□□ -0
CAPN1-217ENST00000529133 DCTN1Q14203 1278 aa15.05■□□□□ -0
CAPN1-217ENST00000529133 CCDC27Q2M243 656 aa15.05■□□□□ -0
CAPN1-217ENST00000529133 FAM182BQ5T319 152 aa15.05■□□□□ -0
CAPN1-217ENST00000529133 MCM10Q7L590 875 aa15.05■□□□□ -0
CAPN1-217ENST00000529133 NGEFQ8N5V2 710 aa15.05■□□□□ -0
CAPN1-217ENST00000529133 RTF1Q92541 710 aaKnown RBP15.05■□□□□ -0
CAPN1-217ENST00000529133 LGR6Q9HBX8 967 aa15.05■□□□□ -0
CAPN1-217ENST00000529133 SALL2Q9Y467 1007 aaPredicted RBP15.05■□□□□ -0
CAPN1-217ENST00000529133 CEMIPQ8WUJ3 1361 aa15.05■□□□□ -0
CAPN1-217ENST00000529133 MRC1P22897 1456 aa15.05■□□□□ -0
CAPN1-217ENST00000529133 DLG5Q8TDM6 1919 aa15.05■□□□□ -0
CAPN1-217ENST00000529133 THUMPD2Q9BTF0 503 aaKnown RBP15.04■□□□□ -0
CAPN1-217ENST00000529133 DOT1LQ8TEK3 1739 aa15.03■□□□□ -0
CAPN1-217ENST00000529133 WWC1Q8IX03 1113 aa15.03■□□□□ -0
CAPN1-217ENST00000529133 SCN11AQ9UI33 1791 aa15.02□□□□□ -0.01
CAPN1-217ENST00000529133 ZNF521Q96K83 1311 aa15.01□□□□□ -0.01
CAPN1-217ENST00000529133 ERVV-2B6SEH9 535 aa15.01□□□□□ -0.01
CAPN1-217ENST00000529133 FAM196AQ6ZSG2 479 aa15.01□□□□□ -0.01
CAPN1-217ENST00000529133 ACSBG1Q96GR2 724 aa15.01□□□□□ -0.01
CAPN1-217ENST00000529133 NHSQ6T4R5 1651 aa15□□□□□ -0.01
CAPN1-217ENST00000529133 SLC52A2Q9HAB3 445 aa15□□□□□ -0.01
CAPN1-217ENST00000529133 PRIM1P49642 420 aaKnown RBP14.99□□□□□ -0.01
CAPN1-217ENST00000529133 CABP4P57796 275 aa14.99□□□□□ -0.01
CAPN1-217ENST00000529133 TEFQ10587 303 aa14.99□□□□□ -0.01
CAPN1-217ENST00000529133 YTHDC1Q96MU7 727 aaKnown RBP14.99□□□□□ -0.01
CAPN1-217ENST00000529133 ZBED9Q6R2W3 1325 aa14.98□□□□□ -0.01
CAPN1-217ENST00000529133 KCNQ2O43526 872 aa14.98□□□□□ -0.01
CAPN1-217ENST00000529133 CALD1Q05682 793 aaKnown RBP14.98□□□□□ -0.01
CAPN1-217ENST00000529133 WDR63Q8IWG1 891 aa14.98□□□□□ -0.01
CAPN1-217ENST00000529133 SYTL4Q96C24 671 aaPredicted RBP14.98□□□□□ -0.01
CAPN1-217ENST00000529133 TMOD3Q9NYL9 352 aa14.98□□□□□ -0.01
CAPN1-217ENST00000529133 SIPA1L3O60292 1781 aaPredicted RBP14.98□□□□□ -0.01
CAPN1-217ENST00000529133 NFATC2IPQ8NCF5 419 aa14.97□□□□□ -0.01
CAPN1-217ENST00000529133 VIRMAQ69YN4 1812 aaKnown RBP14.96□□□□□ -0.01
CAPN1-217ENST00000529133 IL16Q14005 1332 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms