RNA–Protein interactions for RNA: ENST00000529098.5

PDZD3-210, Transcript of PDZ domain containing 3, humanhuman

TSL 2

Gene PDZD3, Length 2,532 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-210ENST00000529098 USP25Q9UHP3 1055 aa21.85■■□□□ 1.09
PDZD3-210ENST00000529098 MYOM2P54296 1465 aa21.85■■□□□ 1.09
PDZD3-210ENST00000529098 LMTK2Q8IWU2 1503 aa21.84■■□□□ 1.09
PDZD3-210ENST00000529098 GABPB1Q06547 395 aaPredicted RBP21.84■■□□□ 1.09
PDZD3-210ENST00000529098 MPNDQ8N594 471 aa21.84■■□□□ 1.09
PDZD3-210ENST00000529098 ARHGAP45Q92619 1136 aa21.84■■□□□ 1.09
PDZD3-210ENST00000529098 ANKRD36BQ8N2N9 1353 aa21.84■■□□□ 1.09
PDZD3-210ENST00000529098 RIOK3O14730 519 aaKnown RBP21.83■■□□□ 1.09
PDZD3-210ENST00000529098 CASC1Q6TDU7 716 aa21.83■■□□□ 1.09
PDZD3-210ENST00000529098 CGNQ9P2M7 1197 aaKnown RBP21.83■■□□□ 1.09
PDZD3-210ENST00000529098 NSD2O96028 1365 aa21.83■■□□□ 1.09
PDZD3-210ENST00000529098 CHGAP10645 457 aaKnown RBP21.82■■□□□ 1.08
PDZD3-210ENST00000529098 BCL11BQ9C0K0 894 aaPredicted RBP21.82■■□□□ 1.08
PDZD3-210ENST00000529098 FOXD4L5Q5VV16 416 aaPredicted RBP21.82■■□□□ 1.08
PDZD3-210ENST00000529098 FOXD4L4Q8WXT5 416 aaPredicted RBP21.82■■□□□ 1.08
PDZD3-210ENST00000529098 KIAA1524Q8TCG1 905 aa21.81■■□□□ 1.08
PDZD3-210ENST00000529098 MROH2AA6NES4 1674 aa21.81■■□□□ 1.08
PDZD3-210ENST00000529098 ABCC3O15438 1527 aa21.81■■□□□ 1.08
PDZD3-210ENST00000529098 TPM3P06753 285 aa21.81■■□□□ 1.08
PDZD3-210ENST00000529098 IGSF3O75054 1194 aa21.8■■□□□ 1.08
PDZD3-210ENST00000529098 PTCH1Q13635 1447 aa21.8■■□□□ 1.08
PDZD3-210ENST00000529098 REC8O95072 547 aa21.8■■□□□ 1.08
PDZD3-210ENST00000529098 KIF1BO60333 1816 aa21.79■■□□□ 1.08
PDZD3-210ENST00000529098 SYCP1Q15431 976 aa21.79■■□□□ 1.08
PDZD3-210ENST00000529098 ADGRF5Q8IZF2 1346 aa21.79■■□□□ 1.08
PDZD3-210ENST00000529098 MCM2P49736 904 aa21.79■■□□□ 1.08
PDZD3-210ENST00000529098 TMX3Q96JJ7 454 aa21.78■■□□□ 1.08
PDZD3-210ENST00000529098 U2SURPO15042 1029 aaKnown RBP21.77■■□□□ 1.08
PDZD3-210ENST00000529098 KDM4AO75164 1064 aa21.77■■□□□ 1.08
PDZD3-210ENST00000529098 CCDC183Q5T5S1 534 aa21.76■■□□□ 1.07
PDZD3-210ENST00000529098 DCTPP1Q9H773 170 aa21.76■■□□□ 1.07
PDZD3-210ENST00000529098 SIGLEC1Q9BZZ2 1709 aa21.76■■□□□ 1.07
PDZD3-210ENST00000529098 CUL4AQ13619 759 aa21.76■■□□□ 1.07
PDZD3-210ENST00000529098 MRPL50Q8N5N7 158 aaKnown RBP21.76■■□□□ 1.07
PDZD3-210ENST00000529098 ABCC4O15439 1325 aa21.75■■□□□ 1.07
PDZD3-210ENST00000529098 KLHL34Q8N239 644 aa21.75■■□□□ 1.07
PDZD3-210ENST00000529098 PDIA4P13667 645 aaKnown RBP21.75■■□□□ 1.07
PDZD3-210ENST00000529098 INTS4Q96HW7 963 aaKnown RBP21.75■■□□□ 1.07
PDZD3-210ENST00000529098 CAMSAP1Q5T5Y3 1602 aa21.75■■□□□ 1.07
PDZD3-210ENST00000529098 GADD45BO75293 160 aaPredicted RBP21.74■■□□□ 1.07
PDZD3-210ENST00000529098 SDSP20132 328 aa21.74■■□□□ 1.07
PDZD3-210ENST00000529098 CDK11BP21127 795 aaKnown RBP21.74■■□□□ 1.07
PDZD3-210ENST00000529098 CTNNA3Q9UI47 895 aa21.74■■□□□ 1.07
PDZD3-210ENST00000529098 NCBP1Q09161 790 aaKnown RBP21.73■■□□□ 1.07
PDZD3-210ENST00000529098 USP48Q86UV5 1035 aa21.73■■□□□ 1.07
PDZD3-210ENST00000529098 ERC2O15083 957 aa21.73■■□□□ 1.07
PDZD3-210ENST00000529098 SLFN14P0C7P3 912 aa21.73■■□□□ 1.07
PDZD3-210ENST00000529098 PYCARDQ9ULZ3 195 aa21.73■■□□□ 1.07
PDZD3-210ENST00000529098 CCDC66A2RUB6 948 aa21.72■■□□□ 1.07
PDZD3-210ENST00000529098 HCLS1P14317 486 aaPredicted RBP21.72■■□□□ 1.07
PDZD3-210ENST00000529098 KCNF1Q9H3M0 494 aa21.72■■□□□ 1.07
PDZD3-210ENST00000529098 DDX41Q9UJV9 622 aaKnown RBP21.72■■□□□ 1.07
PDZD3-210ENST00000529098 NEK4P51957 841 aa21.72■■□□□ 1.07
PDZD3-210ENST00000529098 TMEM87AQ8NBN3 555 aa21.72■■□□□ 1.07
PDZD3-210ENST00000529098 MX1P20591 662 aa21.71■■□□□ 1.07
PDZD3-210ENST00000529098 COL3A1P02461 1466 aaPredicted RBP21.71■■□□□ 1.07
PDZD3-210ENST00000529098 NRXN1Q9ULB1 1477 aa21.71■■□□□ 1.07
PDZD3-210ENST00000529098 ADGRB3O60242 1522 aa21.7■■□□□ 1.06
PDZD3-210ENST00000529098 IFT172Q9UG01 1749 aa21.7■■□□□ 1.06
PDZD3-210ENST00000529098 GOLGA6L6A8MZA4 724 aa21.7■■□□□ 1.06
PDZD3-210ENST00000529098 C16orf71Q8IYS4 520 aaPredicted RBP21.7■■□□□ 1.06
PDZD3-210ENST00000529098 MORC2Q9Y6X9 1032 aaPredicted RBP21.7■■□□□ 1.06
PDZD3-210ENST00000529098 SETBP1Q9Y6X0 1596 aa21.7■■□□□ 1.06
PDZD3-210ENST00000529098 ZC3H13Q5T200 1668 aaKnown RBP21.7■■□□□ 1.06
PDZD3-210ENST00000529098 VAMP4O75379 141 aa21.7■■□□□ 1.06
PDZD3-210ENST00000529098 NUTM2DQ5VT03 806 aaPredicted RBP21.7■■□□□ 1.06
PDZD3-210ENST00000529098 KIF24Q5T7B8 1368 aa21.69■■□□□ 1.06
PDZD3-210ENST00000529098 IRX5P78411 483 aaPredicted RBP21.69■■□□□ 1.06
PDZD3-210ENST00000529098 VGLL3A8MV65 326 aa21.69■■□□□ 1.06
PDZD3-210ENST00000529098 ZBTB22O15209 634 aa21.69■■□□□ 1.06
PDZD3-210ENST00000529098 SLC20A2Q08357 652 aa21.68■■□□□ 1.06
PDZD3-210ENST00000529098 PUS7Q96PZ0 661 aaKnown RBP21.68■■□□□ 1.06
PDZD3-210ENST00000529098 GDPD2Q9HCC8 539 aa21.68■■□□□ 1.06
PDZD3-210ENST00000529098 WDR33Q9C0J8 1336 aaKnown RBP21.68■■□□□ 1.06
PDZD3-210ENST00000529098 KIF13AQ9H1H9 1805 aa21.68■■□□□ 1.06
PDZD3-210ENST00000529098 SMARCA5O60264 1052 aaPredicted RBP21.67■■□□□ 1.06
PDZD3-210ENST00000529098 KCNJ4P48050 445 aa21.67■■□□□ 1.06
PDZD3-210ENST00000529098 SENP3Q9H4L4 574 aaPredicted RBP21.67■■□□□ 1.06
PDZD3-210ENST00000529098 QRICH2Q9H0J4 1663 aa21.67■■□□□ 1.06
PDZD3-210ENST00000529098 SMTNL1A8MU46 457 aa21.66■■□□□ 1.06
PDZD3-210ENST00000529098 API5Q9BZZ5 524 aaKnown RBP21.66■■□□□ 1.06
PDZD3-210ENST00000529098 TERF2Q15554 542 aa21.66■■□□□ 1.06
PDZD3-210ENST00000529098 OTUD7AQ8TE49 926 aaPredicted RBP21.65■■□□□ 1.06
PDZD3-210ENST00000529098 TRAK1Q9UPV9 953 aa21.65■■□□□ 1.06
PDZD3-210ENST00000529098 TIGD1Q96MW7 591 aa21.65■■□□□ 1.06
PDZD3-210ENST00000529098 DNAJC2Q99543 621 aaKnown RBP21.64■■□□□ 1.05
PDZD3-210ENST00000529098 FUCA2Q9BTY2 467 aa21.64■■□□□ 1.05
PDZD3-210ENST00000529098 RTL1A6NKG5 1358 aa21.64■■□□□ 1.05
PDZD3-210ENST00000529098 PLCB2Q00722 1185 aa21.63■■□□□ 1.05
PDZD3-210ENST00000529098 UBE2HP62256 183 aa21.63■■□□□ 1.05
PDZD3-210ENST00000529098 IDI1Q13907 227 aa21.63■■□□□ 1.05
PDZD3-210ENST00000529098 FBXO31Q5XUX0 539 aaPredicted RBP21.63■■□□□ 1.05
PDZD3-210ENST00000529098 ANKRD44Q8N8A2 993 aa21.63■■□□□ 1.05
PDZD3-210ENST00000529098 KIF18AQ8NI77 898 aa21.63■■□□□ 1.05
PDZD3-210ENST00000529098 KNDC1Q76NI1 1749 aa21.62■■□□□ 1.05
PDZD3-210ENST00000529098 AP5Z1O43299 807 aa21.62■■□□□ 1.05
PDZD3-210ENST00000529098 FOXD4L6Q3SYB3 417 aaPredicted RBP21.62■■□□□ 1.05
PDZD3-210ENST00000529098 FOXD4L3Q6VB84 417 aaPredicted RBP21.62■■□□□ 1.05
PDZD3-210ENST00000529098 PPLO60437 1756 aa21.62■■□□□ 1.05
PDZD3-210ENST00000529098 FAM193AP78312 1265 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms