RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 SLIT3O75094 1523 aa15.43■□□□□ 0.06
USF1-208ENST00000528768 POLD1P28340 1107 aa15.43■□□□□ 0.06
USF1-208ENST00000528768 NLRP6P59044 892 aa15.43■□□□□ 0.06
USF1-208ENST00000528768 CARD10Q9BWT7 1032 aa15.43■□□□□ 0.06
USF1-208ENST00000528768 ADAMTS8Q9UP79 889 aa15.43■□□□□ 0.06
USF1-208ENST00000528768 NSD3Q9BZ95 1437 aa15.43■□□□□ 0.06
USF1-208ENST00000528768 ZBTB7CA1YPR0 619 aa15.42■□□□□ 0.06
USF1-208ENST00000528768 CFAP53Q96M91 514 aa15.42■□□□□ 0.06
USF1-208ENST00000528768 CARD14Q9BXL6 1004 aa15.42■□□□□ 0.06
USF1-208ENST00000528768 PPIP5K1Q6PFW1 1433 aa15.42■□□□□ 0.06
USF1-208ENST00000528768 ANKRD36BQ8N2N9 1353 aa15.41■□□□□ 0.06
USF1-208ENST00000528768 GRIN3BO60391 1043 aa15.41■□□□□ 0.06
USF1-208ENST00000528768 SALL2Q9Y467 1007 aaPredicted RBP15.41■□□□□ 0.06
USF1-208ENST00000528768 KCNH5Q8NCM2 988 aa15.4■□□□□ 0.06
USF1-208ENST00000528768 NHSQ6T4R5 1651 aa15.39■□□□□ 0.05
USF1-208ENST00000528768 CSB-PGBD3P0DP91 1061 aa15.39■□□□□ 0.05
USF1-208ENST00000528768 RRP1P56182 461 aaKnown RBP15.39■□□□□ 0.05
USF1-208ENST00000528768 SRPK2P78362 688 aaKnown RBP15.39■□□□□ 0.05
USF1-208ENST00000528768 SLC12A5Q9H2X9 1139 aa15.39■□□□□ 0.05
USF1-208ENST00000528768 TERF2IPQ9NYB0 399 aa15.39■□□□□ 0.05
USF1-208ENST00000528768 CPSF1Q10570 1443 aaKnown RBP15.39■□□□□ 0.05
USF1-208ENST00000528768 PAPPAQ13219 1627 aa15.39■□□□□ 0.05
USF1-208ENST00000528768 COL18A1P39060 1754 aa15.39■□□□□ 0.05
USF1-208ENST00000528768 USP6P35125 1406 aa15.38■□□□□ 0.05
USF1-208ENST00000528768 TNS2Q63HR2 1409 aa15.38■□□□□ 0.05
USF1-208ENST00000528768 CCDC136Q96JN2 1154 aa15.38■□□□□ 0.05
USF1-208ENST00000528768 GOLGA2Q08379 1002 aa15.37■□□□□ 0.05
USF1-208ENST00000528768 ARHGEF25Q86VW2 580 aa15.37■□□□□ 0.05
USF1-208ENST00000528768 AXIN2Q9Y2T1 843 aa15.37■□□□□ 0.05
USF1-208ENST00000528768 SHANK3Q9BYB0 1731 aa15.37■□□□□ 0.05
USF1-208ENST00000528768 SLC27A3Q5K4L6 730 aa15.36■□□□□ 0.05
USF1-208ENST00000528768 HDGFL2Q7Z4V5 671 aaPredicted RBP15.36■□□□□ 0.05
USF1-208ENST00000528768 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.36■□□□□ 0.05
USF1-208ENST00000528768 ABCC6O95255 1503 aa15.36■□□□□ 0.05
USF1-208ENST00000528768 QSER1Q2KHR3 1735 aa15.34■□□□□ 0.05
USF1-208ENST00000528768 HSPA6P17066 643 aa15.34■□□□□ 0.05
USF1-208ENST00000528768 B4GALNT3Q6L9W6 998 aa15.34■□□□□ 0.05
USF1-208ENST00000528768 KLHL34Q8N239 644 aa15.34■□□□□ 0.05
USF1-208ENST00000528768 CABP2Q9NPB3 220 aa15.34■□□□□ 0.05
USF1-208ENST00000528768 ZNF827Q17R98 1081 aa15.33■□□□□ 0.04
USF1-208ENST00000528768 ZNF692Q9BU19 519 aaPredicted RBP15.33■□□□□ 0.04
USF1-208ENST00000528768 COL24A1Q17RW2 1714 aa15.33■□□□□ 0.04
USF1-208ENST00000528768 AKT1S1Q96B36 256 aa15.32■□□□□ 0.04
USF1-208ENST00000528768 GPBP1L1Q9HC44 474 aaPredicted RBP15.32■□□□□ 0.04
USF1-208ENST00000528768 CABP1Q9NZU7 370 aa15.32■□□□□ 0.04
USF1-208ENST00000528768 GOLGB1Q14789 3259 aaKnown RBP15.32■□□□□ 0.04
USF1-208ENST00000528768 NCBP3Q53F19 620 aaKnown RBP15.31■□□□□ 0.04
USF1-208ENST00000528768 CDCA7LQ96GN5 454 aa15.31■□□□□ 0.04
USF1-208ENST00000528768 ACSBG1Q96GR2 724 aa15.31■□□□□ 0.04
USF1-208ENST00000528768 TTC21AQ8NDW8 1320 aa15.31■□□□□ 0.04
USF1-208ENST00000528768 PIK3C2AO00443 1686 aa15.31■□□□□ 0.04
USF1-208ENST00000528768 E9PSI1 815 aa15.3■□□□□ 0.04
USF1-208ENST00000528768 HMGB2P26583 209 aaKnown RBP15.3■□□□□ 0.04
USF1-208ENST00000528768 ZNF521Q96K83 1311 aa15.3■□□□□ 0.04
USF1-208ENST00000528768 ATP10DQ9P241 1426 aa15.3■□□□□ 0.04
USF1-208ENST00000528768 IL2RBP14784 551 aa15.29■□□□□ 0.04
USF1-208ENST00000528768 RUNDC1Q96C34 613 aa15.29■□□□□ 0.04
USF1-208ENST00000528768 LRRC4BQ9NT99 713 aa15.29■□□□□ 0.04
USF1-208ENST00000528768 TFCP2L1Q9NZI6 479 aa15.29■□□□□ 0.04
USF1-208ENST00000528768 BTAF1O14981 1849 aa15.29■□□□□ 0.04
USF1-208ENST00000528768 PNPLA7Q6ZV29 1317 aa15.28■□□□□ 0.04
USF1-208ENST00000528768 APAF1O14727 1248 aa15.28■□□□□ 0.04
USF1-208ENST00000528768 SLFN5Q08AF3 891 aa15.28■□□□□ 0.04
USF1-208ENST00000528768 NLGN2Q8NFZ4 835 aa15.28■□□□□ 0.04
USF1-208ENST00000528768 PNNQ9H307 717 aaKnown RBP15.28■□□□□ 0.04
USF1-208ENST00000528768 RBM19Q9Y4C8 960 aaKnown RBP15.28■□□□□ 0.04
USF1-208ENST00000528768 TTC21BQ7Z4L5 1316 aa15.27■□□□□ 0.04
USF1-208ENST00000528768 MTHFSP49914 203 aa15.27■□□□□ 0.04
USF1-208ENST00000528768 CCDC146Q8IYE0 955 aa15.27■□□□□ 0.04
USF1-208ENST00000528768 RGPD5Q99666 1765 aa15.26■□□□□ 0.03
USF1-208ENST00000528768 A0A1W2PP64 1363 aa15.26■□□□□ 0.03
USF1-208ENST00000528768 YBX3P16989 372 aaKnown RBP eCLIP15.26■□□□□ 0.03
USF1-208ENST00000528768 TNNT2P45379 298 aaPredicted RBP15.26■□□□□ 0.03
USF1-208ENST00000528768 DUSP27Q5VZP5 1158 aa15.26■□□□□ 0.03
USF1-208ENST00000528768 ERBB3P21860 1342 aa15.25■□□□□ 0.03
USF1-208ENST00000528768 NLRP2Q9NX02 1062 aa15.25■□□□□ 0.03
USF1-208ENST00000528768 NFAT5O94916 1531 aa15.25■□□□□ 0.03
USF1-208ENST00000528768 CD2APQ9Y5K6 639 aa15.24■□□□□ 0.03
USF1-208ENST00000528768 ADCY9O60503 1353 aa15.24■□□□□ 0.03
USF1-208ENST00000528768 SOX12O15370 315 aa15.23■□□□□ 0.03
USF1-208ENST00000528768 TRMT2AQ8IZ69 625 aaKnown RBP15.23■□□□□ 0.03
USF1-208ENST00000528768 CCDC27Q2M243 656 aa15.22■□□□□ 0.03
USF1-208ENST00000528768 WDR63Q8IWG1 891 aa15.22■□□□□ 0.03
USF1-208ENST00000528768 EXOC6Q8TAG9 804 aa15.22■□□□□ 0.03
USF1-208ENST00000528768 KAT6BQ8WYB5 2073 aa15.21■□□□□ 0.03
USF1-208ENST00000528768 APLP1P51693 650 aa15.21■□□□□ 0.03
USF1-208ENST00000528768 ANKRD26Q9UPS8 1709 aa15.2■□□□□ 0.02
USF1-208ENST00000528768 U2AF1L5P0DN76 240 aaPredicted RBP15.2■□□□□ 0.02
USF1-208ENST00000528768 U2AF1Q01081 240 aaKnown RBP eCLIP15.2■□□□□ 0.02
USF1-208ENST00000528768 FYB1O15117 783 aa15.19■□□□□ 0.02
USF1-208ENST00000528768 NEFMP07197 916 aa15.19■□□□□ 0.02
USF1-208ENST00000528768 WWC1Q8IX03 1113 aa15.19■□□□□ 0.02
USF1-208ENST00000528768 FLAD1Q8NFF5 587 aa15.19■□□□□ 0.02
USF1-208ENST00000528768 MYH16Q9H6N6 1097 aa15.19■□□□□ 0.02
USF1-208ENST00000528768 USP31Q70CQ4 1352 aa15.19■□□□□ 0.02
USF1-208ENST00000528768 MSH5O43196 834 aa15.18■□□□□ 0.02
USF1-208ENST00000528768 ANKRD24Q8TF21 1146 aa15.18■□□□□ 0.02
USF1-208ENST00000528768 GGNBP2Q9H3C7 697 aa15.18■□□□□ 0.02
USF1-208ENST00000528768 FANCIQ9NVI1 1328 aa15.17■□□□□ 0.02
USF1-208ENST00000528768 MAPK8IP3Q9UPT6 1336 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms