RNA–Protein interactions for RNA: ENST00000528608.5

COMMD9-205, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 988 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-205ENST00000528608 GOPCQ9HD26 462 aa13.33□□□□□ -0.28
COMMD9-205ENST00000528608 ABCC10Q5T3U5 1492 aa13.33□□□□□ -0.28
COMMD9-205ENST00000528608 RAPGEF6Q8TEU7 1601 aa13.32□□□□□ -0.28
COMMD9-205ENST00000528608 ZIC2O95409 532 aaPredicted RBP13.32□□□□□ -0.28
COMMD9-205ENST00000528608 NR3C2P08235 984 aa13.32□□□□□ -0.28
COMMD9-205ENST00000528608 USP17L8P0C7I0 530 aa13.32□□□□□ -0.28
COMMD9-205ENST00000528608 RFC5P40937 340 aa13.32□□□□□ -0.28
COMMD9-205ENST00000528608 GRM5P41594 1212 aa13.32□□□□□ -0.28
COMMD9-205ENST00000528608 FAM69CQ0P6D2 419 aa13.32□□□□□ -0.28
COMMD9-205ENST00000528608 PDXDC2PQ6P474 469 aa13.32□□□□□ -0.28
COMMD9-205ENST00000528608 ARHGAP9Q9BRR9 750 aa13.32□□□□□ -0.28
COMMD9-205ENST00000528608 MAP4K5Q9Y4K4 846 aa13.32□□□□□ -0.28
COMMD9-205ENST00000528608 ZC3H4Q9UPT8 1303 aaKnown RBP13.32□□□□□ -0.28
COMMD9-205ENST00000528608 ATP10BO94823 1461 aa13.31□□□□□ -0.28
COMMD9-205ENST00000528608 ERFEQ4G0M1 354 aa13.31□□□□□ -0.28
COMMD9-205ENST00000528608 TPRNQ4KMQ1 711 aa13.31□□□□□ -0.28
COMMD9-205ENST00000528608 DIP2BQ9P265 1576 aa13.31□□□□□ -0.28
COMMD9-205ENST00000528608 BRPF1P55201 1214 aaPredicted RBP13.3□□□□□ -0.28
COMMD9-205ENST00000528608 SCARF1Q14162 830 aa13.3□□□□□ -0.28
COMMD9-205ENST00000528608 MRPL14Q6P1L8 145 aaKnown RBP13.3□□□□□ -0.28
COMMD9-205ENST00000528608 KLF16Q9BXK1 252 aaPredicted RBP13.3□□□□□ -0.28
COMMD9-205ENST00000528608 NUP153P49790 1475 aaKnown RBP13.29□□□□□ -0.28
COMMD9-205ENST00000528608 WFS1O76024 890 aa13.29□□□□□ -0.28
COMMD9-205ENST00000528608 PNMA1Q8ND90 353 aa13.29□□□□□ -0.28
COMMD9-205ENST00000528608 ITPKCQ96DU7 683 aa13.29□□□□□ -0.28
COMMD9-205ENST00000528608 ZFP42Q96MM3 310 aa13.29□□□□□ -0.28
COMMD9-205ENST00000528608 ZFAND3Q9H8U3 227 aa13.29□□□□□ -0.28
COMMD9-205ENST00000528608 CLIP1P30622 1438 aa13.29□□□□□ -0.28
COMMD9-205ENST00000528608 ZBTB33Q86T24 672 aa13.28□□□□□ -0.28
COMMD9-205ENST00000528608 SLC10A4Q96EP9 437 aa13.27□□□□□ -0.29
COMMD9-205ENST00000528608 PURBQ96QR8 312 aaKnown RBP13.27□□□□□ -0.29
COMMD9-205ENST00000528608 HMX1Q9NP08 348 aaPredicted RBP13.27□□□□□ -0.29
COMMD9-205ENST00000528608 EPRSP07814 1512 aaKnown RBP13.26□□□□□ -0.29
COMMD9-205ENST00000528608 PTK2Q05397 1052 aa13.26□□□□□ -0.29
COMMD9-205ENST00000528608 EPS8L1Q8TE68 723 aa13.26□□□□□ -0.29
COMMD9-205ENST00000528608 WDR7Q9Y4E6 1490 aa13.25□□□□□ -0.29
COMMD9-205ENST00000528608 FMN1Q68DA7 1419 aa13.25□□□□□ -0.29
COMMD9-205ENST00000528608 CCDC116Q8IYX3 515 aa13.25□□□□□ -0.29
COMMD9-205ENST00000528608 CEP162Q5TB80 1403 aa13.24□□□□□ -0.29
COMMD9-205ENST00000528608 NFX1Q12986 1120 aaKnown RBP13.24□□□□□ -0.29
COMMD9-205ENST00000528608 TMEM259Q4ZIN3 620 aa13.24□□□□□ -0.29
COMMD9-205ENST00000528608 LCE2AQ5TA79 106 aaPredicted RBP13.24□□□□□ -0.29
COMMD9-205ENST00000528608 TERTO14746 1132 aaKnown RBP13.23□□□□□ -0.29
COMMD9-205ENST00000528608 CDV3Q9UKY7 258 aaKnown RBP13.23□□□□□ -0.29
COMMD9-205ENST00000528608 EMILIN1Q9Y6C2 1016 aa13.23□□□□□ -0.29
COMMD9-205ENST00000528608 GLI2P10070 1586 aa13.23□□□□□ -0.29
COMMD9-205ENST00000528608 GPSM3Q9Y4H4 160 aa13.22□□□□□ -0.29
COMMD9-205ENST00000528608 TSPOAP1O95153 1857 aa13.22□□□□□ -0.29
COMMD9-205ENST00000528608 CDK13Q14004 1512 aaKnown RBP13.22□□□□□ -0.29
COMMD9-205ENST00000528608 UPP2O95045 317 aa13.21□□□□□ -0.29
COMMD9-205ENST00000528608 C6orf118Q5T5N4 469 aa13.21□□□□□ -0.29
COMMD9-205ENST00000528608 LRRIQ1Q96JM4 1722 aa13.2□□□□□ -0.3
COMMD9-205ENST00000528608 ADAM32Q8TC27 787 aa13.2□□□□□ -0.3
COMMD9-205ENST00000528608 PCF11O94913 1555 aaKnown RBP13.2□□□□□ -0.3
COMMD9-205ENST00000528608 MEIOBQ8N635 442 aa13.19□□□□□ -0.3
COMMD9-205ENST00000528608 KCTD15Q96SI1 283 aaPredicted RBP13.19□□□□□ -0.3
COMMD9-205ENST00000528608 OCSTAMPQ9BR26 566 aa13.19□□□□□ -0.3
COMMD9-205ENST00000528608 HECW1Q76N89 1606 aa13.19□□□□□ -0.3
COMMD9-205ENST00000528608 CASKIN1Q8WXD9 1431 aa13.19□□□□□ -0.3
COMMD9-205ENST00000528608 PPRC1Q5VV67 1664 aaKnown RBP13.18□□□□□ -0.3
COMMD9-205ENST00000528608 LINC00528Q8N1L1 170 aa13.18□□□□□ -0.3
COMMD9-205ENST00000528608 NXF1Q9UBU9 619 aaKnown RBP13.18□□□□□ -0.3
COMMD9-205ENST00000528608 MAP3K4Q9Y6R4 1608 aa13.17□□□□□ -0.3
COMMD9-205ENST00000528608 PLEKHD1A6NEE1 506 aa13.17□□□□□ -0.3
COMMD9-205ENST00000528608 BMP2P12643 396 aa13.17□□□□□ -0.3
COMMD9-205ENST00000528608 PPP1R26Q5T8A7 1209 aaPredicted RBP13.17□□□□□ -0.3
COMMD9-205ENST00000528608 PGPEP1Q9NXJ5 209 aa13.17□□□□□ -0.3
COMMD9-205ENST00000528608 SLC16A10Q8TF71 515 aa13.16□□□□□ -0.3
COMMD9-205ENST00000528608 DHX9Q08211 1270 aaKnown RBP13.15□□□□□ -0.3
COMMD9-205ENST00000528608 TRIM34Q9BYJ4 488 aa13.15□□□□□ -0.3
COMMD9-205ENST00000528608 CD109Q6YHK3 1445 aa13.14□□□□□ -0.31
COMMD9-205ENST00000528608 NBPF20Q3BBV1 942 aa13.14□□□□□ -0.31
COMMD9-205ENST00000528608 INTS6LQ5JSJ4 861 aaKnown RBP13.14□□□□□ -0.31
COMMD9-205ENST00000528608 FYCO1Q9BQS8 1478 aa13.13□□□□□ -0.31
COMMD9-205ENST00000528608 SOBPA7XYQ1 873 aa13.13□□□□□ -0.31
COMMD9-205ENST00000528608 MAN1A2O60476 641 aa13.13□□□□□ -0.31
COMMD9-205ENST00000528608 DZIP3Q86Y13 1208 aaKnown RBP13.13□□□□□ -0.31
COMMD9-205ENST00000528608 TSEN34Q9BSV6 310 aaKnown RBP13.13□□□□□ -0.31
COMMD9-205ENST00000528608 CFAP43Q8NDM7 1665 aa13.12□□□□□ -0.31
COMMD9-205ENST00000528608 ABCA9Q8IUA7 1624 aa13.12□□□□□ -0.31
COMMD9-205ENST00000528608 VEGFBP49765 207 aa13.11□□□□□ -0.31
COMMD9-205ENST00000528608 NPAS3Q8IXF0 933 aa13.11□□□□□ -0.31
COMMD9-205ENST00000528608 MAGI3Q5TCQ9 1506 aa13.1□□□□□ -0.31
COMMD9-205ENST00000528608 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.1□□□□□ -0.31
COMMD9-205ENST00000528608 RAB15P59190 212 aa13.1□□□□□ -0.31
COMMD9-205ENST00000528608 CBLBQ13191 982 aa13.1□□□□□ -0.31
COMMD9-205ENST00000528608 COL17A1Q9UMD9 1497 aaPredicted RBP13.1□□□□□ -0.31
COMMD9-205ENST00000528608 TROQ12816 1431 aaPredicted RBP13.09□□□□□ -0.31
COMMD9-205ENST00000528608 LCE2CQ5TA81 110 aa13.09□□□□□ -0.31
COMMD9-205ENST00000528608 CDK11AQ9UQ88 783 aaPredicted RBP13.09□□□□□ -0.31
COMMD9-205ENST00000528608 CCDC18Q5T9S5 1454 aa13.09□□□□□ -0.31
COMMD9-205ENST00000528608 WIPF1O43516 503 aa13.08□□□□□ -0.32
COMMD9-205ENST00000528608 GJD4Q96KN9 370 aaPredicted RBP13.08□□□□□ -0.32
COMMD9-205ENST00000528608 KIF14Q15058 1648 aa13.08□□□□□ -0.32
COMMD9-205ENST00000528608 TTC37Q6PGP7 1564 aa13.07□□□□□ -0.32
COMMD9-205ENST00000528608 VPS8Q8N3P4 1428 aa13.07□□□□□ -0.32
COMMD9-205ENST00000528608 TEX14Q8IWB6 1497 aa13.07□□□□□ -0.32
COMMD9-205ENST00000528608 KDM6BO15054 1643 aa13.06□□□□□ -0.32
COMMD9-205ENST00000528608 ZBBXA8MT70 800 aa13.06□□□□□ -0.32
COMMD9-205ENST00000528608 H3BM21 787 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms