RNA–Protein interactions for RNA: ENST00000528216.5

PGAP2-231, Transcript of post-GPI attachment to proteins 2, human

TSL 1 (best)

Gene PGAP2, Length 1,815 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGAP2-231	ENST00000528216	DCC	P43146	1447 aa		12.91	□□□□□ -0.34
PGAP2-231	ENST00000528216	ABCC4	O15439	1325 aa		12.91	□□□□□ -0.34
PGAP2-231	ENST00000528216	ORAI2	Q96SN7	254 aa		12.91	□□□□□ -0.34
PGAP2-231	ENST00000528216	TNN	Q9UQP3	1299 aa		12.91	□□□□□ -0.34
PGAP2-231	ENST00000528216	LAS1L	Q9Y4W2	734 aa	Known RBP	12.91	□□□□□ -0.34
PGAP2-231	ENST00000528216	MAP3K19	Q56UN5	1328 aa		12.91	□□□□□ -0.34
PGAP2-231	ENST00000528216	CHL1	O00533	1208 aa		12.9	□□□□□ -0.34
PGAP2-231	ENST00000528216	EIF5B	O60841	1220 aa	Known RBP	12.9	□□□□□ -0.34
PGAP2-231	ENST00000528216	GAS2L2	Q8NHY3	880 aa		12.9	□□□□□ -0.34
PGAP2-231	ENST00000528216	IGSF1	Q8N6C5	1336 aa		12.9	□□□□□ -0.34
PGAP2-231	ENST00000528216	GCC1	Q96CN9	775 aa		12.9	□□□□□ -0.34
PGAP2-231	ENST00000528216	BABAM1	Q9NWV8	329 aa		12.9	□□□□□ -0.34
PGAP2-231	ENST00000528216	MST1R	Q04912	1400 aa		12.9	□□□□□ -0.35
PGAP2-231	ENST00000528216	SKAP1	Q86WV1	359 aa		12.89	□□□□□ -0.35
PGAP2-231	ENST00000528216	MARF1	Q9Y4F3	1742 aa	Known RBP	12.89	□□□□□ -0.35
PGAP2-231	ENST00000528216	AMPH	P49418	695 aa		12.88	□□□□□ -0.35
PGAP2-231	ENST00000528216	HSP90AB2P	Q58FF8	381 aa		12.88	□□□□□ -0.35
PGAP2-231	ENST00000528216	BRINP3	Q76B58	766 aa		12.88	□□□□□ -0.35
PGAP2-231	ENST00000528216	PHRF1	Q9P1Y6	1649 aa	Known RBP	12.88	□□□□□ -0.35
PGAP2-231	ENST00000528216	C1orf167	Q5SNV9	1468 aa		12.88	□□□□□ -0.35
PGAP2-231	ENST00000528216	PTPRC	P08575	1304 aa		12.88	□□□□□ -0.35
PGAP2-231	ENST00000528216	RTL5	Q5HYW3	569 aa	Predicted RBP	12.88	□□□□□ -0.35
PGAP2-231	ENST00000528216	LRRC37A3	O60309	1634 aa		12.87	□□□□□ -0.35
PGAP2-231	ENST00000528216	ZBTB7B	O15156	539 aa	Predicted RBP	12.87	□□□□□ -0.35
PGAP2-231	ENST00000528216	RTF1	Q92541	710 aa	Known RBP	12.87	□□□□□ -0.35
PGAP2-231	ENST00000528216	CRB1	P82279	1406 aa		12.86	□□□□□ -0.35
PGAP2-231	ENST00000528216	NLRP6	P59044	892 aa		12.86	□□□□□ -0.35
PGAP2-231	ENST00000528216	BECN1	Q14457	450 aa		12.86	□□□□□ -0.35
PGAP2-231	ENST00000528216	DDX17	Q92841	729 aa	Known RBP	12.86	□□□□□ -0.35
PGAP2-231	ENST00000528216	THUMPD2	Q9BTF0	503 aa	Known RBP	12.86	□□□□□ -0.35
PGAP2-231	ENST00000528216	CHMP4A	Q9BY43	222 aa		12.86	□□□□□ -0.35
PGAP2-231	ENST00000528216	PHF8	Q9UPP1	1060 aa		12.86	□□□□□ -0.35
PGAP2-231	ENST00000528216	NUCB1	Q02818	461 aa		12.85	□□□□□ -0.35
PGAP2-231	ENST00000528216	AEBP1	Q8IUX7	1158 aa		12.85	□□□□□ -0.35
PGAP2-231	ENST00000528216	FOXO3	O43524	673 aa		12.85	□□□□□ -0.35
PGAP2-231	ENST00000528216	HSPA1L	P34931	641 aa		12.85	□□□□□ -0.35
PGAP2-231	ENST00000528216	INTS3	Q68E01	1043 aa	Known RBP	12.85	□□□□□ -0.35
PGAP2-231	ENST00000528216	TSPYL6	Q8N831	410 aa		12.85	□□□□□ -0.35
PGAP2-231	ENST00000528216	C8orf58	Q8NAV2	365 aa		12.85	□□□□□ -0.35
PGAP2-231	ENST00000528216	KCNH5	Q8NCM2	988 aa		12.84	□□□□□ -0.35
PGAP2-231	ENST00000528216	CACNA1F	O60840	1977 aa		12.84	□□□□□ -0.35
PGAP2-231	ENST00000528216	HOXC9	P31274	260 aa		12.83	□□□□□ -0.36
PGAP2-231	ENST00000528216	XPC	Q01831	940 aa	Predicted RBP	12.83	□□□□□ -0.36
PGAP2-231	ENST00000528216	PSME1	Q06323	249 aa		12.83	□□□□□ -0.36
PGAP2-231	ENST00000528216	KIF1A	Q12756	1690 aa		12.83	□□□□□ -0.36
PGAP2-231	ENST00000528216	ABTB2	Q8N961	1025 aa		12.83	□□□□□ -0.36
PGAP2-231	ENST00000528216	EYA1	Q99502	592 aa		12.83	□□□□□ -0.36
PGAP2-231	ENST00000528216	ROBO1	Q9Y6N7	1651 aa		12.82	□□□□□ -0.36
PGAP2-231	ENST00000528216	NFAT5	O94916	1531 aa		12.82	□□□□□ -0.36
PGAP2-231	ENST00000528216	USP19	O94966	1318 aa		12.82	□□□□□ -0.36
PGAP2-231	ENST00000528216	FAM83G	A6ND36	823 aa		12.82	□□□□□ -0.36
PGAP2-231	ENST00000528216	CHD1L	Q86WJ1	897 aa		12.82	□□□□□ -0.36
PGAP2-231	ENST00000528216	TBC1D32	Q96NH3	1257 aa		12.81	□□□□□ -0.36
PGAP2-231	ENST00000528216	LTN1	O94822	1766 aa		12.81	□□□□□ -0.36
PGAP2-231	ENST00000528216	MTHFSD	Q2M296	383 aa	Known RBP	12.81	□□□□□ -0.36
PGAP2-231	ENST00000528216	KRT28	Q7Z3Y7	464 aa		12.81	□□□□□ -0.36
PGAP2-231	ENST00000528216	RPAP2	Q8IXW5	612 aa	Predicted RBP	12.81	□□□□□ -0.36
PGAP2-231	ENST00000528216	MAP3K5	Q99683	1374 aa		12.8	□□□□□ -0.36
PGAP2-231	ENST00000528216	NPHP3	Q7Z494	1330 aa		12.8	□□□□□ -0.36
PGAP2-231	ENST00000528216	GNAT3	A8MTJ3	354 aa		12.8	□□□□□ -0.36
PGAP2-231	ENST00000528216	SOCS7	O14512	581 aa		12.8	□□□□□ -0.36
PGAP2-231	ENST00000528216	DCTN1	Q14203	1278 aa		12.8	□□□□□ -0.36
PGAP2-231	ENST00000528216	BMP2KL	Q5H9B9	411 aa		12.8	□□□□□ -0.36
PGAP2-231	ENST00000528216	IP6K1	Q92551	441 aa		12.8	□□□□□ -0.36
PGAP2-231	ENST00000528216	MCM10	Q7L590	875 aa		12.79	□□□□□ -0.36
PGAP2-231	ENST00000528216	TSPYL4	Q9UJ04	414 aa		12.79	□□□□□ -0.36
PGAP2-231	ENST00000528216	SLIT3	O75094	1523 aa		12.79	□□□□□ -0.36
PGAP2-231	ENST00000528216	ELL2	O00472	640 aa	Predicted RBP	12.78	□□□□□ -0.36
PGAP2-231	ENST00000528216	CCT4	P50991	539 aa	Known RBP	12.78	□□□□□ -0.36
PGAP2-231	ENST00000528216	RGS12	O14924	1447 aa		12.78	□□□□□ -0.36
PGAP2-231	ENST00000528216	N4BP2	Q86UW6	1770 aa	Predicted RBP	12.78	□□□□□ -0.36
PGAP2-231	ENST00000528216	LMOD2	Q6P5Q4	547 aa		12.78	□□□□□ -0.36
PGAP2-231	ENST00000528216	LRRC59	Q96AG4	307 aa	Known RBP	12.78	□□□□□ -0.36
PGAP2-231	ENST00000528216	OVOS2	A0A0G2JMS6	1433 aa		12.78	□□□□□ -0.36
PGAP2-231	ENST00000528216	PLEKHG2	Q9H7P9	1386 aa		12.78	□□□□□ -0.36
PGAP2-231	ENST00000528216	ANKRD44	Q8N8A2	993 aa		12.77	□□□□□ -0.37
PGAP2-231	ENST00000528216	STK31	Q9BXU1	1019 aa		12.77	□□□□□ -0.37
PGAP2-231	ENST00000528216	PXDNL	A1KZ92	1463 aa		12.77	□□□□□ -0.37
PGAP2-231	ENST00000528216	NCAPD2	Q15021	1401 aa		12.76	□□□□□ -0.37
PGAP2-231	ENST00000528216	SOX12	O15370	315 aa		12.76	□□□□□ -0.37
PGAP2-231	ENST00000528216	CCDC30	Q5VVM6	783 aa		12.76	□□□□□ -0.37
PGAP2-231	ENST00000528216	DCTPP1	Q9H773	170 aa		12.76	□□□□□ -0.37
PGAP2-231	ENST00000528216	SOS2	Q07890	1332 aa	Predicted RBP	12.76	□□□□□ -0.37
PGAP2-231	ENST00000528216	FAM208A	Q9UK61	1670 aa	Known RBP	12.76	□□□□□ -0.37
PGAP2-231	ENST00000528216	HMMR	O75330	724 aa		12.76	□□□□□ -0.37
PGAP2-231	ENST00000528216	PLEKHG5	O94827	1062 aa		12.76	□□□□□ -0.37
PGAP2-231	ENST00000528216	HOXB7	P09629	217 aa		12.76	□□□□□ -0.37
PGAP2-231	ENST00000528216	NBR1	Q14596	966 aa		12.76	□□□□□ -0.37
PGAP2-231	ENST00000528216	TAF7	Q15545	349 aa	Predicted RBP	12.76	□□□□□ -0.37
PGAP2-231	ENST00000528216	MED1	Q15648	1581 aa	Predicted RBP	12.75	□□□□□ -0.37
PGAP2-231	ENST00000528216	ANKRD45	Q5TZF3	282 aa		12.75	□□□□□ -0.37
PGAP2-231	ENST00000528216	ILDR2	Q71H61	639 aa		12.75	□□□□□ -0.37
PGAP2-231	ENST00000528216	LMO7	Q8WWI1	1683 aa		12.75	□□□□□ -0.37
PGAP2-231	ENST00000528216	SEC24B	O95487	1268 aa		12.74	□□□□□ -0.37
PGAP2-231	ENST00000528216	CAMTA1	Q9Y6Y1	1673 aa		12.74	□□□□□ -0.37
PGAP2-231	ENST00000528216	ATP10D	Q9P241	1426 aa		12.74	□□□□□ -0.37
PGAP2-231	ENST00000528216	PHLPP1	O60346	1717 aa		12.74	□□□□□ -0.37
PGAP2-231	ENST00000528216	TRPM3	Q9HCF6	1732 aa	Predicted RBP	12.74	□□□□□ -0.37
PGAP2-231	ENST00000528216	CEMIP	Q8WUJ3	1361 aa		12.74	□□□□□ -0.37
PGAP2-231	ENST00000528216	SLC4A2	P04920	1241 aa		12.74	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms