RNA–Protein interactions for RNA: ENST00000527962.5

CTTN-212, Transcript of cortactin, humanhuman

TSL 2

Gene CTTN, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-212ENST00000527962 FAM208AQ9UK61 1670 aaKnown RBP22.03■■□□□ 1.12
CTTN-212ENST00000527962 SMG6Q86US8 1419 aaKnown RBP22.03■■□□□ 1.12
CTTN-212ENST00000527962 BTAF1O14981 1849 aa22.03■■□□□ 1.12
CTTN-212ENST00000527962 KAT6BQ8WYB5 2073 aa22.02■■□□□ 1.12
CTTN-212ENST00000527962 KLHL34Q8N239 644 aa22.02■■□□□ 1.12
CTTN-212ENST00000527962 PAPPAQ13219 1627 aa22.02■■□□□ 1.11
CTTN-212ENST00000527962 CCNL1Q9UK58 526 aaPredicted RBP22■■□□□ 1.11
CTTN-212ENST00000527962 PNPLA7Q6ZV29 1317 aa22■■□□□ 1.11
CTTN-212ENST00000527962 USP47Q96K76 1375 aa21.99■■□□□ 1.11
CTTN-212ENST00000527962 FYB1O15117 783 aa21.99■■□□□ 1.11
CTTN-212ENST00000527962 FBLN1P23142 703 aa21.99■■□□□ 1.11
CTTN-212ENST00000527962 MSH5O43196 834 aa21.98■■□□□ 1.11
CTTN-212ENST00000527962 TATP17735 454 aaPredicted RBP21.98■■□□□ 1.11
CTTN-212ENST00000527962 RRS1Q15050 365 aaKnown RBP21.98■■□□□ 1.11
CTTN-212ENST00000527962 NBPF6Q5VWK0 638 aa21.98■■□□□ 1.11
CTTN-212ENST00000527962 NBPF4Q96M43 638 aa21.98■■□□□ 1.11
CTTN-212ENST00000527962 GGNBP2Q9H3C7 697 aa21.98■■□□□ 1.11
CTTN-212ENST00000527962 KCNQ4P56696 695 aa21.96■■□□□ 1.11
CTTN-212ENST00000527962 PELP1Q8IZL8 1130 aaKnown RBP21.95■■□□□ 1.1
CTTN-212ENST00000527962 PCDH11XQ9BZA7 1347 aa21.94■■□□□ 1.1
CTTN-212ENST00000527962 PCDH11YQ9BZA8 1340 aa21.94■■□□□ 1.1
CTTN-212ENST00000527962 KIF24Q5T7B8 1368 aa21.94■■□□□ 1.1
CTTN-212ENST00000527962 MEGF6O75095 1541 aa21.94■■□□□ 1.1
CTTN-212ENST00000527962 UTRNP46939 3433 aa21.93■■□□□ 1.1
CTTN-212ENST00000527962 NSD2O96028 1365 aa21.93■■□□□ 1.1
CTTN-212ENST00000527962 USHBP1Q8N6Y0 703 aa21.93■■□□□ 1.1
CTTN-212ENST00000527962 INSRP06213 1382 aa21.92■■□□□ 1.1
CTTN-212ENST00000527962 FLAD1Q8NFF5 587 aa21.92■■□□□ 1.1
CTTN-212ENST00000527962 FLT4P35916 1363 aa21.91■■□□□ 1.1
CTTN-212ENST00000527962 GRIN3BO60391 1043 aa21.9■■□□□ 1.1
CTTN-212ENST00000527962 HSP90AB2PQ58FF8 381 aa21.9■■□□□ 1.1
CTTN-212ENST00000527962 MPRIPQ6WCQ1 1025 aa21.88■■□□□ 1.09
CTTN-212ENST00000527962 COL23A1Q86Y22 540 aaPredicted RBP21.88■■□□□ 1.09
CTTN-212ENST00000527962 SMARCC1Q92922 1105 aaPredicted RBP21.88■■□□□ 1.09
CTTN-212ENST00000527962 QSER1Q2KHR3 1735 aa21.87■■□□□ 1.09
CTTN-212ENST00000527962 DOT1LQ8TEK3 1739 aa21.87■■□□□ 1.09
CTTN-212ENST00000527962 C1QTNF8P60827 252 aa21.87■■□□□ 1.09
CTTN-212ENST00000527962 SENP3-EIF4A1A0A087X0R7 540 aa21.85■■□□□ 1.09
CTTN-212ENST00000527962 NLGN2Q8NFZ4 835 aa21.85■■□□□ 1.09
CTTN-212ENST00000527962 SPG7Q9UQ90 795 aa21.85■■□□□ 1.09
CTTN-212ENST00000527962 PALLDQ8WX93 1383 aa21.85■■□□□ 1.09
CTTN-212ENST00000527962 PPM1GO15355 546 aaPredicted RBP21.84■■□□□ 1.09
CTTN-212ENST00000527962 CHD4Q14839 1912 aa21.84■■□□□ 1.09
CTTN-212ENST00000527962 LY75O60449 1722 aa21.83■■□□□ 1.09
CTTN-212ENST00000527962 GIGYF1O75420 1035 aaPredicted RBP21.83■■□□□ 1.09
CTTN-212ENST00000527962 TRIM26Q12899 539 aaPredicted RBP21.83■■□□□ 1.09
CTTN-212ENST00000527962 AK7Q96M32 723 aa21.83■■□□□ 1.09
CTTN-212ENST00000527962 CD2APQ9Y5K6 639 aa21.83■■□□□ 1.09
CTTN-212ENST00000527962 TIMELESSQ9UNS1 1208 aa21.82■■□□□ 1.08
CTTN-212ENST00000527962 CYP27B1O15528 508 aa21.81■■□□□ 1.08
CTTN-212ENST00000527962 MSL1Q68DK7 614 aa21.81■■□□□ 1.08
CTTN-212ENST00000527962 EMILIN1Q9Y6C2 1016 aa21.81■■□□□ 1.08
CTTN-212ENST00000527962 CARD14Q9BXL6 1004 aa21.8■■□□□ 1.08
CTTN-212ENST00000527962 NSD3Q9BZ95 1437 aa21.8■■□□□ 1.08
CTTN-212ENST00000527962 RGPD2P0DJD1 1756 aa21.79■■□□□ 1.08
CTTN-212ENST00000527962 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.79■■□□□ 1.082e-12■■□□□ 11.9
CTTN-212ENST00000527962 SHANK3Q9BYB0 1731 aa21.79■■□□□ 1.08
CTTN-212ENST00000527962 COL24A1Q17RW2 1714 aa21.78■■□□□ 1.08
CTTN-212ENST00000527962 NKX1-1Q15270 411 aaPredicted RBP21.78■■□□□ 1.08
CTTN-212ENST00000527962 WASHC2AQ641Q2 1341 aa21.78■■□□□ 1.08
CTTN-212ENST00000527962 YBX3P16989 372 aaKnown RBP eCLIP21.76■■□□□ 1.07
CTTN-212ENST00000527962 PIGBQ92521 554 aa21.76■■□□□ 1.07
CTTN-212ENST00000527962 TMOD3Q9NYL9 352 aa21.76■■□□□ 1.07
CTTN-212ENST00000527962 IFNL2Q8IZJ0 200 aa21.74■■□□□ 1.07
CTTN-212ENST00000527962 GOLGB1Q14789 3259 aaKnown RBP21.74■■□□□ 1.07
CTTN-212ENST00000527962 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.73■■□□□ 1.07
CTTN-212ENST00000527962 LOC102724428A0A0B4J2F2 783 aa21.73■■□□□ 1.07
CTTN-212ENST00000527962 PHF14O94880 888 aa21.73■■□□□ 1.07
CTTN-212ENST00000527962 SSFA2P28290 1259 aa21.73■■□□□ 1.07
CTTN-212ENST00000527962 SIK1P57059 783 aa21.73■■□□□ 1.07
CTTN-212ENST00000527962 EYA1Q99502 592 aa21.73■■□□□ 1.07
CTTN-212ENST00000527962 KIF20BQ96Q89 1820 aa21.73■■□□□ 1.07
CTTN-212ENST00000527962 TUBGCP6Q96RT7 1819 aa21.73■■□□□ 1.07
CTTN-212ENST00000527962 C5P01031 1676 aa21.72■■□□□ 1.07
CTTN-212ENST00000527962 POLR3GLQ9BT43 218 aa21.7■■□□□ 1.06
CTTN-212ENST00000527962 NCAPD2Q15021 1401 aa21.7■■□□□ 1.06
CTTN-212ENST00000527962 ATP6V1AP38606 617 aa21.69■■□□□ 1.06
CTTN-212ENST00000527962 POLKQ9UBT6 870 aa21.69■■□□□ 1.06
CTTN-212ENST00000527962 PHKG2P15735 406 aa21.68■■□□□ 1.06
CTTN-212ENST00000527962 PLEKHG2Q9H7P9 1386 aa21.68■■□□□ 1.06
CTTN-212ENST00000527962 CLSPNQ9HAW4 1339 aa21.67■■□□□ 1.06
CTTN-212ENST00000527962 GNPATO15228 680 aa21.67■■□□□ 1.06
CTTN-212ENST00000527962 HSP90AB1P08238 724 aaKnown RBP21.67■■□□□ 1.06
CTTN-212ENST00000527962 GPBP1L1Q9HC44 474 aaPredicted RBP21.67■■□□□ 1.06
CTTN-212ENST00000527962 C4BP0C0L5 1744 aa21.66■■□□□ 1.06
CTTN-212ENST00000527962 LINC00116Q8NCU8 138 aa21.66■■□□□ 1.06
CTTN-212ENST00000527962 ASAP1Q9ULH1 1129 aa21.66■■□□□ 1.06
CTTN-212ENST00000527962 IGSF1Q8N6C5 1336 aa21.65■■□□□ 1.06
CTTN-212ENST00000527962 TNNT2P45379 298 aaPredicted RBP21.65■■□□□ 1.06
CTTN-212ENST00000527962 PKD1L3Q7Z443 1732 aa21.65■■□□□ 1.06
CTTN-212ENST00000527962 EIF4A2Q14240 407 aaKnown RBP21.64■■□□□ 1.05
CTTN-212ENST00000527962 ATP10DQ9P241 1426 aa21.63■■□□□ 1.05
CTTN-212ENST00000527962 ERVV-2B6SEH9 535 aa21.63■■□□□ 1.05
CTTN-212ENST00000527962 PLEKHO1Q53GL0 409 aaPredicted RBP21.63■■□□□ 1.05
CTTN-212ENST00000527962 TRAPPC3LQ5T215 181 aa21.63■■□□□ 1.05
CTTN-212ENST00000527962 AMIGO3Q86WK7 504 aa21.63■■□□□ 1.05
CTTN-212ENST00000527962 ATG3Q9NT62 314 aa21.63■■□□□ 1.05
CTTN-212ENST00000527962 RTCBQ9Y3I0 505 aaKnown RBP21.63■■□□□ 1.05
CTTN-212ENST00000527962 ITPK1Q13572 414 aa21.62■■□□□ 1.05
CTTN-212ENST00000527962 NLGN1Q8N2Q7 840 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms