RNA–Protein interactions for RNA: ENST00000527845.1

CKLF-CMTM1-202, Transcript of CKLF-CMTM1 readthrough, humanhuman

TSL 3

Gene CKLF-CMTM1, Length 504 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-202ENST00000527845 LY75O60449 1722 aa24.38■■□□□ 1.49
CKLF-CMTM1-202ENST00000527845 RRS1Q15050 365 aaKnown RBP24.37■■□□□ 1.49
CKLF-CMTM1-202ENST00000527845 FLT4P35916 1363 aa24.37■■□□□ 1.49
CKLF-CMTM1-202ENST00000527845 CLSPNQ9HAW4 1339 aa24.36■■□□□ 1.49
CKLF-CMTM1-202ENST00000527845 SGIP1Q9BQI5 828 aa24.36■■□□□ 1.49
CKLF-CMTM1-202ENST00000527845 INSRP06213 1382 aa24.36■■□□□ 1.49
CKLF-CMTM1-202ENST00000527845 FBLN1P23142 703 aa24.35■■□□□ 1.49
CKLF-CMTM1-202ENST00000527845 ZNF827Q17R98 1081 aa24.35■■□□□ 1.49
CKLF-CMTM1-202ENST00000527845 SLC16A10Q8TF71 515 aa24.35■■□□□ 1.49
CKLF-CMTM1-202ENST00000527845 RAPGEF4Q8WZA2 1011 aa24.35■■□□□ 1.49
CKLF-CMTM1-202ENST00000527845 SYTL4Q96C24 671 aaPredicted RBP24.35■■□□□ 1.49
CKLF-CMTM1-202ENST00000527845 LRRC4BQ9NT99 713 aa24.35■■□□□ 1.49
CKLF-CMTM1-202ENST00000527845 MAP3K5Q99683 1374 aa24.33■■□□□ 1.49
CKLF-CMTM1-202ENST00000527845 HMGB2P26583 209 aaKnown RBP24.33■■□□□ 1.49
CKLF-CMTM1-202ENST00000527845 PRIM1P49642 420 aaKnown RBP24.33■■□□□ 1.49
CKLF-CMTM1-202ENST00000527845 NBPF6Q5VWK0 638 aa24.33■■□□□ 1.49
CKLF-CMTM1-202ENST00000527845 AKT1S1Q96B36 256 aa24.33■■□□□ 1.49
CKLF-CMTM1-202ENST00000527845 NBPF4Q96M43 638 aa24.33■■□□□ 1.49
CKLF-CMTM1-202ENST00000527845 FHDC1Q9C0D6 1143 aaPredicted RBP24.33■■□□□ 1.49
CKLF-CMTM1-202ENST00000527845 NSD2O96028 1365 aa24.32■■□□□ 1.48
CKLF-CMTM1-202ENST00000527845 TATP17735 454 aaPredicted RBP24.32■■□□□ 1.48
CKLF-CMTM1-202ENST00000527845 ARXQ96QS3 562 aa24.32■■□□□ 1.48
CKLF-CMTM1-202ENST00000527845 SYT17Q9BSW7 474 aa24.32■■□□□ 1.48
CKLF-CMTM1-202ENST00000527845 COL24A1Q17RW2 1714 aa24.31■■□□□ 1.48
CKLF-CMTM1-202ENST00000527845 PCDH11XQ9BZA7 1347 aa24.31■■□□□ 1.48
CKLF-CMTM1-202ENST00000527845 PCDH11YQ9BZA8 1340 aa24.31■■□□□ 1.48
CKLF-CMTM1-202ENST00000527845 ANKRD26Q9UPS8 1709 aa24.3■■□□□ 1.48
CKLF-CMTM1-202ENST00000527845 NSD3Q9BZ95 1437 aa24.3■■□□□ 1.48
CKLF-CMTM1-202ENST00000527845 TUBGCP6Q96RT7 1819 aa24.3■■□□□ 1.48
CKLF-CMTM1-202ENST00000527845 TFCP2L1Q9NZI6 479 aa24.28■■□□□ 1.48
CKLF-CMTM1-202ENST00000527845 POLD1P28340 1107 aa24.27■■□□□ 1.48
CKLF-CMTM1-202ENST00000527845 HSP90AB2PQ58FF8 381 aa24.27■■□□□ 1.48
CKLF-CMTM1-202ENST00000527845 USHBP1Q8N6Y0 703 aa24.27■■□□□ 1.48
CKLF-CMTM1-202ENST00000527845 CCNL1Q9UK58 526 aaPredicted RBP24.26■■□□□ 1.47
CKLF-CMTM1-202ENST00000527845 PNPLA7Q6ZV29 1317 aa24.26■■□□□ 1.47
CKLF-CMTM1-202ENST00000527845 PKD1L3Q7Z443 1732 aa24.26■■□□□ 1.47
CKLF-CMTM1-202ENST00000527845 CHD4Q14839 1912 aa24.24■■□□□ 1.47
CKLF-CMTM1-202ENST00000527845 CARD14Q9BXL6 1004 aa24.24■■□□□ 1.47
CKLF-CMTM1-202ENST00000527845 NCAPD2Q15021 1401 aa24.23■■□□□ 1.47
CKLF-CMTM1-202ENST00000527845 C5P01031 1676 aa24.23■■□□□ 1.47
CKLF-CMTM1-202ENST00000527845 EMILIN1Q9Y6C2 1016 aa24.21■■□□□ 1.47
CKLF-CMTM1-202ENST00000527845 MAP2P11137 1827 aaKnown RBP24.21■■□□□ 1.47
CKLF-CMTM1-202ENST00000527845 ITGB4P16144 1822 aa24.19■■□□□ 1.46
CKLF-CMTM1-202ENST00000527845 WASHC2AQ641Q2 1341 aa24.18■■□□□ 1.46
CKLF-CMTM1-202ENST00000527845 KCNQ4P56696 695 aa24.18■■□□□ 1.46
CKLF-CMTM1-202ENST00000527845 TAF1LQ8IZX4 1826 aa24.18■■□□□ 1.46
CKLF-CMTM1-202ENST00000527845 TOGARAM1Q9Y4F4 1720 aa24.18■■□□□ 1.46
CKLF-CMTM1-202ENST00000527845 PLEKHG2Q9H7P9 1386 aa24.17■■□□□ 1.46
CKLF-CMTM1-202ENST00000527845 SMARCC1Q92922 1105 aaPredicted RBP24.17■■□□□ 1.46
CKLF-CMTM1-202ENST00000527845 SPG7Q9UQ90 795 aa24.17■■□□□ 1.46
CKLF-CMTM1-202ENST00000527845 PALLDQ8WX93 1383 aa24.16■■□□□ 1.46
CKLF-CMTM1-202ENST00000527845 PPM1GO15355 546 aaPredicted RBP24.15■■□□□ 1.46
CKLF-CMTM1-202ENST00000527845 CYP27B1O15528 508 aa24.15■■□□□ 1.46
CKLF-CMTM1-202ENST00000527845 FLAD1Q8NFF5 587 aa24.15■■□□□ 1.46
CKLF-CMTM1-202ENST00000527845 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.14■■□□□ 1.45
CKLF-CMTM1-202ENST00000527845 MPRIPQ6WCQ1 1025 aa24.13■■□□□ 1.45
CKLF-CMTM1-202ENST00000527845 KLHL34Q8N239 644 aa24.13■■□□□ 1.45
CKLF-CMTM1-202ENST00000527845 PCGF6Q9BYE7 350 aa24.13■■□□□ 1.45
CKLF-CMTM1-202ENST00000527845 MSH5O43196 834 aa24.12■■□□□ 1.45
CKLF-CMTM1-202ENST00000527845 NKX1-1Q15270 411 aaPredicted RBP24.12■■□□□ 1.45
CKLF-CMTM1-202ENST00000527845 GPR162Q16538 588 aa24.12■■□□□ 1.45
CKLF-CMTM1-202ENST00000527845 C4BP0C0L5 1744 aa24.12■■□□□ 1.45
CKLF-CMTM1-202ENST00000527845 EIF4G2P78344 907 aaKnown RBP eCLIP24.11■■□□□ 1.45
CKLF-CMTM1-202ENST00000527845 COL23A1Q86Y22 540 aaPredicted RBP24.1■■□□□ 1.45
CKLF-CMTM1-202ENST00000527845 ZNF784Q8NCA9 323 aaPredicted RBP24.1■■□□□ 1.45
CKLF-CMTM1-202ENST00000527845 POLR3GLQ9BT43 218 aa24.1■■□□□ 1.45
CKLF-CMTM1-202ENST00000527845 POLKQ9UBT6 870 aa24.1■■□□□ 1.45
CKLF-CMTM1-202ENST00000527845 EYA1Q99502 592 aa24.09■■□□□ 1.45
CKLF-CMTM1-202ENST00000527845 IFNL2Q8IZJ0 200 aa24.06■■□□□ 1.44
CKLF-CMTM1-202ENST00000527845 AK7Q96M32 723 aa24.06■■□□□ 1.44
CKLF-CMTM1-202ENST00000527845 UTRNP46939 3433 aa24.06■■□□□ 1.44
CKLF-CMTM1-202ENST00000527845 UBR3Q6ZT12 1888 aa24.06■■□□□ 1.44
CKLF-CMTM1-202ENST00000527845 PIGBQ92521 554 aa24.05■■□□□ 1.44
CKLF-CMTM1-202ENST00000527845 TMOD3Q9NYL9 352 aa24.05■■□□□ 1.44
CKLF-CMTM1-202ENST00000527845 EIF4A2Q14240 407 aaKnown RBP24.03■■□□□ 1.44
CKLF-CMTM1-202ENST00000527845 GRIN3BO60391 1043 aa24.02■■□□□ 1.44
CKLF-CMTM1-202ENST00000527845 HSPA5P11021 654 aaKnown RBP24.02■■□□□ 1.44
CKLF-CMTM1-202ENST00000527845 PHKG2P15735 406 aa24.02■■□□□ 1.44
CKLF-CMTM1-202ENST00000527845 PELP1Q8IZL8 1130 aaKnown RBP24.02■■□□□ 1.44
CKLF-CMTM1-202ENST00000527845 NLGN2Q8NFZ4 835 aa24.02■■□□□ 1.44
CKLF-CMTM1-202ENST00000527845 IGSF1Q8N6C5 1336 aa24.01■■□□□ 1.43
CKLF-CMTM1-202ENST00000527845 LOC102724428A0A0B4J2F2 783 aa24■■□□□ 1.43
CKLF-CMTM1-202ENST00000527845 SSFA2P28290 1259 aa24■■□□□ 1.43
CKLF-CMTM1-202ENST00000527845 TNNT2P45379 298 aaPredicted RBP24■■□□□ 1.43
CKLF-CMTM1-202ENST00000527845 SIK1P57059 783 aa24■■□□□ 1.43
CKLF-CMTM1-202ENST00000527845 MSL1Q68DK7 614 aa24■■□□□ 1.43
CKLF-CMTM1-202ENST00000527845 PANK3Q9H999 370 aa24■■□□□ 1.43
CKLF-CMTM1-202ENST00000527845 CD2APQ9Y5K6 639 aa24■■□□□ 1.43
CKLF-CMTM1-202ENST00000527845 HSP90AB1P08238 724 aaKnown RBP23.99■■□□□ 1.43
CKLF-CMTM1-202ENST00000527845 ZNF831Q5JPB2 1677 aa23.99■■□□□ 1.43
CKLF-CMTM1-202ENST00000527845 CCER1Q8TC90 406 aaPredicted RBP23.97■■□□□ 1.43
CKLF-CMTM1-202ENST00000527845 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.95■■□□□ 1.42
CKLF-CMTM1-202ENST00000527845 ERVV-2B6SEH9 535 aa23.95■■□□□ 1.42
CKLF-CMTM1-202ENST00000527845 PHF14O94880 888 aa23.94■■□□□ 1.42
CKLF-CMTM1-202ENST00000527845 ATP6V1AP38606 617 aa23.94■■□□□ 1.42
CKLF-CMTM1-202ENST00000527845 AMOTQ4VCS5 1084 aa23.94■■□□□ 1.42
CKLF-CMTM1-202ENST00000527845 PLEKHO1Q53GL0 409 aaPredicted RBP23.94■■□□□ 1.42
CKLF-CMTM1-202ENST00000527845 LINC00116Q8NCU8 138 aa23.94■■□□□ 1.42
CKLF-CMTM1-202ENST00000527845 DCAF5Q96JK2 942 aa23.94■■□□□ 1.42
CKLF-CMTM1-202ENST00000527845 ASAP1Q9ULH1 1129 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms