RNA–Protein interactions for RNA: ENST00000527599.1

CTNND1-217, Transcript of catenin delta 1, humanhuman

TSL 2

Gene CTNND1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-217ENST00000527599 SLFNL1Q499Z3 407 aa16.1■□□□□ 0.17
CTNND1-217ENST00000527599 RNF217Q8TC41 542 aa16.1■□□□□ 0.17
CTNND1-217ENST00000527599 CLUAP1Q96AJ1 413 aa16.1■□□□□ 0.17
CTNND1-217ENST00000527599 ALG2Q9H553 416 aa16.1■□□□□ 0.17
CTNND1-217ENST00000527599 POLMQ9NP87 494 aaPredicted RBP16.1■□□□□ 0.17
CTNND1-217ENST00000527599 POM121CA8CG34 1229 aa16.09■□□□□ 0.17
CTNND1-217ENST00000527599 RNF135Q8IUD6 432 aa16.09■□□□□ 0.17
CTNND1-217ENST00000527599 H3BM21 787 aa16.08■□□□□ 0.16
CTNND1-217ENST00000527599 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.08■□□□□ 0.167e-7■■□□□ 13
CTNND1-217ENST00000527599 A0A1W2PRU2 124 aa16.07■□□□□ 0.16
CTNND1-217ENST00000527599 SOX11P35716 441 aa16.07■□□□□ 0.16
CTNND1-217ENST00000527599 TRIM52Q96A61 297 aa16.07■□□□□ 0.16
CTNND1-217ENST00000527599 PIK3CDO00329 1044 aa16.06■□□□□ 0.16
CTNND1-217ENST00000527599 NPAS3Q8IXF0 933 aa16.06■□□□□ 0.16
CTNND1-217ENST00000527599 ADAMTS19Q8TE59 1207 aa16.06■□□□□ 0.16
CTNND1-217ENST00000527599 DOLKQ9UPQ8 538 aa16.06■□□□□ 0.16
CTNND1-217ENST00000527599 PTSQ03393 145 aa16.04■□□□□ 0.16
CTNND1-217ENST00000527599 CYP2U1Q7Z449 544 aa16.04■□□□□ 0.16
CTNND1-217ENST00000527599 ERBB4Q15303 1308 aa16.03■□□□□ 0.16
CTNND1-217ENST00000527599 FNBP4Q8N3X1 1017 aaPredicted RBP16.03■□□□□ 0.16
CTNND1-217ENST00000527599 MEN1O00255 615 aa16.02■□□□□ 0.16
CTNND1-217ENST00000527599 PPFIA3O75145 1194 aa16.02■□□□□ 0.16
CTNND1-217ENST00000527599 RNF144AP50876 292 aaPredicted RBP16.02■□□□□ 0.16
CTNND1-217ENST00000527599 WWC1Q8IX03 1113 aa16.01■□□□□ 0.15
CTNND1-217ENST00000527599 PLPP7Q8NBV4 271 aa16.01■□□□□ 0.15
CTNND1-217ENST00000527599 ARHGEF10LQ9HCE6 1279 aa16.01■□□□□ 0.15
CTNND1-217ENST00000527599 MYCP01106 439 aaPredicted RBP16■□□□□ 0.15
CTNND1-217ENST00000527599 OXLD1Q5BKU9 147 aa16■□□□□ 0.15
CTNND1-217ENST00000527599 SLC16A10Q8TF71 515 aa16■□□□□ 0.15
CTNND1-217ENST00000527599 RAB6BQ9NRW1 208 aa16■□□□□ 0.15
CTNND1-217ENST00000527599 CLN3Q13286 438 aa15.99■□□□□ 0.15
CTNND1-217ENST00000527599 SENP3-EIF4A1A0A087X0R7 540 aa15.98■□□□□ 0.15
CTNND1-217ENST00000527599 STAU1O95793 577 aaKnown RBP15.98■□□□□ 0.15
CTNND1-217ENST00000527599 ESF1Q9H501 851 aaKnown RBP15.98■□□□□ 0.15
CTNND1-217ENST00000527599 SLC35F4A4IF30 521 aa15.97■□□□□ 0.15
CTNND1-217ENST00000527599 USP4Q13107 963 aa15.97■□□□□ 0.15
CTNND1-217ENST00000527599 GNRH1P01148 92 aa15.96■□□□□ 0.15
CTNND1-217ENST00000527599 IL2RAP01589 272 aa15.96■□□□□ 0.15
CTNND1-217ENST00000527599 MAP7D1Q3KQU3 841 aa15.96■□□□□ 0.15
CTNND1-217ENST00000527599 PROSER2Q86WR7 435 aaPredicted RBP15.96■□□□□ 0.15
CTNND1-217ENST00000527599 LYSMD3Q7Z3D4 306 aa15.95■□□□□ 0.14
CTNND1-217ENST00000527599 PRICKLE2Q7Z3G6 844 aa15.95■□□□□ 0.14
CTNND1-217ENST00000527599 CCDC155Q8N6L0 562 aa15.95■□□□□ 0.14
CTNND1-217ENST00000527599 GPC1P35052 558 aa15.94■□□□□ 0.14
CTNND1-217ENST00000527599 HDGFL1Q5TGJ6 251 aa15.94■□□□□ 0.14
CTNND1-217ENST00000527599 IRF7Q92985 503 aa15.94■□□□□ 0.14
CTNND1-217ENST00000527599 GRIP2Q9C0E4 1043 aa15.94■□□□□ 0.14
CTNND1-217ENST00000527599 HRH3Q9Y5N1 445 aa15.94■□□□□ 0.14
CTNND1-217ENST00000527599 WIPF1O43516 503 aa15.93■□□□□ 0.14
CTNND1-217ENST00000527599 GMPRP36959 345 aa15.93■□□□□ 0.14
CTNND1-217ENST00000527599 NLRP3Q96P20 1036 aa15.93■□□□□ 0.14
CTNND1-217ENST00000527599 VSIG8P0DPA2 414 aa15.92■□□□□ 0.14
CTNND1-217ENST00000527599 SKIP12755 728 aa15.91■□□□□ 0.14
CTNND1-217ENST00000527599 RHOQP17081 205 aa15.91■□□□□ 0.14
CTNND1-217ENST00000527599 CNKSR1Q969H4 720 aa15.91■□□□□ 0.14
CTNND1-217ENST00000527599 XAGE2Q96GT9 111 aa15.91■□□□□ 0.14
CTNND1-217ENST00000527599 UCN2Q96RP3 112 aa15.91■□□□□ 0.14
CTNND1-217ENST00000527599 ESYT1Q9BSJ8 1104 aa15.91■□□□□ 0.14
CTNND1-217ENST00000527599 A6NJR5 290 aa15.9■□□□□ 0.14
CTNND1-217ENST00000527599 ETNK1Q9HBU6 452 aa15.9■□□□□ 0.14
CTNND1-217ENST00000527599 NFATC2IPQ8NCF5 419 aa15.89■□□□□ 0.13
CTNND1-217ENST00000527599 CENPCQ03188 943 aa15.88■□□□□ 0.13
CTNND1-217ENST00000527599 SCNN1DP51172 638 aa15.87■□□□□ 0.13
CTNND1-217ENST00000527599 POU4F2Q12837 409 aa15.87■□□□□ 0.13
CTNND1-217ENST00000527599 SLC27A3Q5K4L6 730 aa15.87■□□□□ 0.13
CTNND1-217ENST00000527599 SIRT1Q96EB6 747 aa15.87■□□□□ 0.13
CTNND1-217ENST00000527599 FHDC1Q9C0D6 1143 aaPredicted RBP15.87■□□□□ 0.13
CTNND1-217ENST00000527599 GPR161Q8N6U8 529 aaKnown RBP15.86■□□□□ 0.13
CTNND1-217ENST00000527599 ITGA6P23229 1130 aa15.85■□□□□ 0.13
CTNND1-217ENST00000527599 TBC1D9Q6ZT07 1266 aa15.85■□□□□ 0.13
CTNND1-217ENST00000527599 DEPDC4Q8N2C3 294 aa15.85■□□□□ 0.13
CTNND1-217ENST00000527599 PCDHGA11Q9Y5H2 935 aa15.85■□□□□ 0.13
CTNND1-217ENST00000527599 CUEDC1Q9NWM3 386 aaPredicted RBP15.84■□□□□ 0.13
CTNND1-217ENST00000527599 SPATA31C2B4DYI2 1134 aa15.83■□□□□ 0.12
CTNND1-217ENST00000527599 NCOA4Q13772 614 aa15.83■□□□□ 0.12
CTNND1-217ENST00000527599 NBPF10Q6P3W6 841 aaKnown RBP15.83■□□□□ 0.12
CTNND1-217ENST00000527599 NBPF15Q8N660 670 aa15.83■□□□□ 0.12
CTNND1-217ENST00000527599 GLMNQ92990 594 aa15.83■□□□□ 0.12
CTNND1-217ENST00000527599 USP17L5A8MUK1 530 aa15.82■□□□□ 0.12
CTNND1-217ENST00000527599 NANOS1Q8WY41 292 aaKnown RBP15.82■□□□□ 0.12
CTNND1-217ENST00000527599 EML3Q32P44 896 aa15.81■□□□□ 0.12
CTNND1-217ENST00000527599 ESCO1Q5FWF5 840 aa15.81■□□□□ 0.12
CTNND1-217ENST00000527599 GDF10P55107 478 aa15.8■□□□□ 0.12
CTNND1-217ENST00000527599 TMEM229AB2RXF0 380 aa15.79■□□□□ 0.12
CTNND1-217ENST00000527599 INHAP05111 366 aa15.79■□□□□ 0.12
CTNND1-217ENST00000527599 VWA5B2Q8N398 1253 aa15.79■□□□□ 0.12
CTNND1-217ENST00000527599 LZTS3O60299 673 aaPredicted RBP15.78■□□□□ 0.12
CTNND1-217ENST00000527599 LORP23490 312 aaPredicted RBP15.78■□□□□ 0.12
CTNND1-217ENST00000527599 ZSCAN10Q96SZ4 725 aaPredicted RBP15.78■□□□□ 0.12
CTNND1-217ENST00000527599 NOD1Q9Y239 953 aa15.78■□□□□ 0.12
CTNND1-217ENST00000527599 ATP9BO43861 1147 aa15.77■□□□□ 0.12
CTNND1-217ENST00000527599 WASLO00401 505 aaPredicted RBP15.76■□□□□ 0.11
CTNND1-217ENST00000527599 GTF2IP78347 998 aa15.76■□□□□ 0.11
CTNND1-217ENST00000527599 TAS1R3Q7RTX0 852 aa15.76■□□□□ 0.11
CTNND1-217ENST00000527599 PLEKHM2Q8IWE5 1019 aa15.76■□□□□ 0.11
CTNND1-217ENST00000527599 USP17L3A6NCW0 530 aa15.75■□□□□ 0.11
CTNND1-217ENST00000527599 USP17L4A6NCW7 530 aa15.75■□□□□ 0.11
CTNND1-217ENST00000527599 KRT76Q01546 638 aa15.75■□□□□ 0.11
CTNND1-217ENST00000527599 WDR44Q5JSH3 913 aa15.75■□□□□ 0.11
CTNND1-217ENST00000527599 USP17L2Q6R6M4 530 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms