RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 WNK3Q9BYP7 1800 aa10.69□□□□□ -0.7
VPS26B-204ENST00000527586 WASLO00401 505 aaPredicted RBP10.68□□□□□ -0.7
VPS26B-204ENST00000527586 HABP4Q5JVS0 413 aaKnown RBP10.68□□□□□ -0.7
VPS26B-204ENST00000527586 TGFB2P61812 414 aa10.67□□□□□ -0.7
VPS26B-204ENST00000527586 PPIP5K1Q6PFW1 1433 aa10.67□□□□□ -0.7
VPS26B-204ENST00000527586 GLTPD2A6NH11 291 aa10.66□□□□□ -0.7
VPS26B-204ENST00000527586 SOX10P56693 466 aa10.66□□□□□ -0.7
VPS26B-204ENST00000527586 SYTL4Q96C24 671 aaPredicted RBP10.66□□□□□ -0.7
VPS26B-204ENST00000527586 CCDC7Q96M83 1385 aa10.65□□□□□ -0.7
VPS26B-204ENST00000527586 ABCC6O95255 1503 aa10.65□□□□□ -0.7
VPS26B-204ENST00000527586 RGL3Q3MIN7 710 aa10.65□□□□□ -0.7
VPS26B-204ENST00000527586 CHADLQ6NUI6 762 aa10.65□□□□□ -0.7
VPS26B-204ENST00000527586 NUDT16Q96DE0 195 aaKnown RBP10.65□□□□□ -0.7
VPS26B-204ENST00000527586 PKD1L3Q7Z443 1732 aa10.64□□□□□ -0.71
VPS26B-204ENST00000527586 ACEP12821 1306 aa10.64□□□□□ -0.71
VPS26B-204ENST00000527586 ERBB3P21860 1342 aa10.64□□□□□ -0.71
VPS26B-204ENST00000527586 PIK3C2AO00443 1686 aa10.64□□□□□ -0.71
VPS26B-204ENST00000527586 DPEP1P16444 411 aa10.64□□□□□ -0.71
VPS26B-204ENST00000527586 ZNF219Q9P2Y4 722 aaPredicted RBP10.64□□□□□ -0.71
VPS26B-204ENST00000527586 PIK3C2GO75747 1445 aa10.64□□□□□ -0.71
VPS26B-204ENST00000527586 COL18A1P39060 1754 aa10.63□□□□□ -0.71
VPS26B-204ENST00000527586 POTECB2RU33 542 aa10.63□□□□□ -0.71
VPS26B-204ENST00000527586 PRIM1P49642 420 aaKnown RBP10.63□□□□□ -0.71
VPS26B-204ENST00000527586 DGKZQ13574 1117 aa10.63□□□□□ -0.71
VPS26B-204ENST00000527586 BEGAINQ9BUH8 593 aa10.63□□□□□ -0.71
VPS26B-204ENST00000527586 C14orf93Q9H972 538 aaKnown RBP10.63□□□□□ -0.71
VPS26B-204ENST00000527586 ROCK1Q13464 1354 aa10.63□□□□□ -0.71
VPS26B-204ENST00000527586 TMEM88BA6NKF7 163 aa10.62□□□□□ -0.71
VPS26B-204ENST00000527586 PHF14O94880 888 aa10.62□□□□□ -0.71
VPS26B-204ENST00000527586 CFAP70Q5T0N1 1121 aa10.62□□□□□ -0.71
VPS26B-204ENST00000527586 TSKSQ9UJT2 592 aa10.62□□□□□ -0.71
VPS26B-204ENST00000527586 KAT6BQ8WYB5 2073 aa10.62□□□□□ -0.71
VPS26B-204ENST00000527586 CUL9Q8IWT3 2517 aa10.61□□□□□ -0.71
VPS26B-204ENST00000527586 PITPNM2Q9BZ72 1349 aa10.61□□□□□ -0.71
VPS26B-204ENST00000527586 WDR33Q9C0J8 1336 aaKnown RBP10.61□□□□□ -0.71
VPS26B-204ENST00000527586 ZC3H4Q9UPT8 1303 aaKnown RBP10.61□□□□□ -0.71
VPS26B-204ENST00000527586 AMIGO3Q86WK7 504 aa10.61□□□□□ -0.71
VPS26B-204ENST00000527586 SLC17A8Q8NDX2 589 aa10.61□□□□□ -0.71
VPS26B-204ENST00000527586 DCAF5Q96JK2 942 aa10.61□□□□□ -0.71
VPS26B-204ENST00000527586 POLR3AO14802 1390 aaPredicted RBP10.61□□□□□ -0.71
VPS26B-204ENST00000527586 SPATA31E1Q6ZUB1 1445 aa10.6□□□□□ -0.71
VPS26B-204ENST00000527586 IL2RBP14784 551 aa10.6□□□□□ -0.71
VPS26B-204ENST00000527586 DEFB115Q30KQ5 88 aa10.6□□□□□ -0.71
VPS26B-204ENST00000527586 DDX54Q8TDD1 881 aaKnown RBP10.6□□□□□ -0.71
VPS26B-204ENST00000527586 PASKQ96RG2 1323 aa10.59□□□□□ -0.71
VPS26B-204ENST00000527586 MMP10P09238 476 aa10.59□□□□□ -0.71
VPS26B-204ENST00000527586 POTEIP0CG38 1075 aa10.59□□□□□ -0.71
VPS26B-204ENST00000527586 POTEJP0CG39 1038 aa10.59□□□□□ -0.71
VPS26B-204ENST00000527586 FXR1P51114 621 aaKnown RBP eCLIP10.59□□□□□ -0.71
VPS26B-204ENST00000527586 NLRP6P59044 892 aa10.59□□□□□ -0.71
VPS26B-204ENST00000527586 TRAK1Q9UPV9 953 aa10.59□□□□□ -0.71
VPS26B-204ENST00000527586 VIRMAQ69YN4 1812 aaKnown RBP10.58□□□□□ -0.72
VPS26B-204ENST00000527586 N4BP2Q86UW6 1770 aaPredicted RBP10.58□□□□□ -0.72
VPS26B-204ENST00000527586 NSD2O96028 1365 aa10.58□□□□□ -0.72
VPS26B-204ENST00000527586 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.58□□□□□ -0.72
VPS26B-204ENST00000527586 RASSF10A6NK89 507 aa10.58□□□□□ -0.72
VPS26B-204ENST00000527586 KCNA3P22001 575 aa10.58□□□□□ -0.72
VPS26B-204ENST00000527586 NBPF15Q8N660 670 aa10.58□□□□□ -0.72
VPS26B-204ENST00000527586 AK7Q96M32 723 aa10.58□□□□□ -0.72
VPS26B-204ENST00000527586 ANKRD36BQ8N2N9 1353 aa10.57□□□□□ -0.72
VPS26B-204ENST00000527586 USP47Q96K76 1375 aa10.57□□□□□ -0.72
VPS26B-204ENST00000527586 RASSF7Q02833 373 aa10.57□□□□□ -0.72
VPS26B-204ENST00000527586 DALRD3Q5D0E6 543 aaKnown RBP10.57□□□□□ -0.72
VPS26B-204ENST00000527586 ARHGEF25Q86VW2 580 aa10.57□□□□□ -0.72
VPS26B-204ENST00000527586 NLRP2Q9NX02 1062 aa10.57□□□□□ -0.72
VPS26B-204ENST00000527586 PIM2Q9P1W9 311 aa10.57□□□□□ -0.72
VPS26B-204ENST00000527586 CPSF1Q10570 1443 aaKnown RBP10.57□□□□□ -0.72
VPS26B-204ENST00000527586 LY75O60449 1722 aa10.56□□□□□ -0.72
VPS26B-204ENST00000527586 KIAA1551Q9HCM1 1747 aa10.56□□□□□ -0.72
VPS26B-204ENST00000527586 PLEKHG3A1L390 1219 aa10.56□□□□□ -0.72
VPS26B-204ENST00000527586 HMGB2P26583 209 aaKnown RBP10.56□□□□□ -0.72
VPS26B-204ENST00000527586 USP54Q70EL1 1684 aa10.55□□□□□ -0.72
VPS26B-204ENST00000527586 QRICH2Q9H0J4 1663 aa10.55□□□□□ -0.72
VPS26B-204ENST00000527586 SLIT3O75094 1523 aa10.54□□□□□ -0.72
VPS26B-204ENST00000527586 LMNB1P20700 586 aa10.54□□□□□ -0.72
VPS26B-204ENST00000527586 CCDC87Q9NVE4 849 aa10.54□□□□□ -0.72
VPS26B-204ENST00000527586 CCDC61Q9Y6R9 512 aa10.54□□□□□ -0.72
VPS26B-204ENST00000527586 ITSN1Q15811 1721 aa10.53□□□□□ -0.72
VPS26B-204ENST00000527586 SOX12O15370 315 aa10.53□□□□□ -0.72
VPS26B-204ENST00000527586 APLP2Q06481 763 aa10.53□□□□□ -0.72
VPS26B-204ENST00000527586 DPY19L2Q6NUT2 758 aa10.53□□□□□ -0.72
VPS26B-204ENST00000527586 CDK19Q9BWU1 502 aa10.53□□□□□ -0.72
VPS26B-204ENST00000527586 KDM6AO15550 1401 aaPredicted RBP10.52□□□□□ -0.73
VPS26B-204ENST00000527586 SSFA2P28290 1259 aa10.52□□□□□ -0.73
VPS26B-204ENST00000527586 ABT1Q9ULW3 272 aaKnown RBP10.52□□□□□ -0.73
VPS26B-204ENST00000527586 A0A0C4DFX4 3053 aa10.52□□□□□ -0.73
VPS26B-204ENST00000527586 ITGBL1O95965 494 aaPredicted RBP10.51□□□□□ -0.73
VPS26B-204ENST00000527586 GRM1Q13255 1194 aa10.51□□□□□ -0.73
VPS26B-204ENST00000527586 PAXIP1Q6ZW49 1069 aaPredicted RBP10.51□□□□□ -0.73
VPS26B-204ENST00000527586 GPR101Q96P66 508 aaPredicted RBP10.51□□□□□ -0.73
VPS26B-204ENST00000527586 KIF13BQ9NQT8 1826 aa10.51□□□□□ -0.73
VPS26B-204ENST00000527586 NSD3Q9BZ95 1437 aa10.5□□□□□ -0.73
VPS26B-204ENST00000527586 ITGAEP38570 1179 aa10.5□□□□□ -0.73
VPS26B-204ENST00000527586 LDHDQ86WU2 507 aa10.5□□□□□ -0.73
VPS26B-204ENST00000527586 KCNH5Q8NCM2 988 aa10.5□□□□□ -0.73
VPS26B-204ENST00000527586 CAPNS2Q96L46 248 aa10.5□□□□□ -0.73
VPS26B-204ENST00000527586 C5P01031 1676 aa10.5□□□□□ -0.73
VPS26B-204ENST00000527586 ARFGEF1Q9Y6D6 1849 aa10.49□□□□□ -0.73
VPS26B-204ENST00000527586 CA12O43570 354 aa10.49□□□□□ -0.73
VPS26B-204ENST00000527586 ECE1P42892 770 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms