RNA–Protein interactions for RNA: ENST00000527492.5

LINC02546-201, Transcript of long intergenic non-protein coding RNA 2546, humanhuman

TSL 3

Gene LINC02546, Length 396 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02546-201ENST00000527492 USP4Q13107 963 aa5.54□□□□□ -1.52
LINC02546-201ENST00000527492 SUZ12Q15022 739 aaKnown RBP5.54□□□□□ -1.52
LINC02546-201ENST00000527492 EML3Q32P44 896 aa5.54□□□□□ -1.52
LINC02546-201ENST00000527492 TSGA10IPQ3SY00 556 aa5.54□□□□□ -1.52
LINC02546-201ENST00000527492 HPS1Q92902 700 aa5.54□□□□□ -1.52
LINC02546-201ENST00000527492 KIFC2Q96AC6 838 aa5.54□□□□□ -1.52
LINC02546-201ENST00000527492 SIRT1Q96EB6 747 aa5.54□□□□□ -1.52
LINC02546-201ENST00000527492 MAFBQ9Y5Q3 323 aaPredicted RBP5.54□□□□□ -1.52
LINC02546-201ENST00000527492 USP17L3A6NCW0 530 aa5.53□□□□□ -1.52
LINC02546-201ENST00000527492 USP17L4A6NCW7 530 aa5.53□□□□□ -1.52
LINC02546-201ENST00000527492 ZIC2O95409 532 aaPredicted RBP5.53□□□□□ -1.52
LINC02546-201ENST00000527492 MYCP01106 439 aaPredicted RBP5.53□□□□□ -1.52
LINC02546-201ENST00000527492 RFX1P22670 979 aa5.53□□□□□ -1.52
LINC02546-201ENST00000527492 WDR4P57081 412 aaKnown RBP5.53□□□□□ -1.52
LINC02546-201ENST00000527492 NCOA4Q13772 614 aa5.53□□□□□ -1.52
LINC02546-201ENST00000527492 CC2D2BQ6DHV5 1058 aa5.53□□□□□ -1.52
LINC02546-201ENST00000527492 USP17L2Q6R6M4 530 aa5.53□□□□□ -1.52
LINC02546-201ENST00000527492 USP17L1Q7RTZ2 530 aa5.53□□□□□ -1.52
LINC02546-201ENST00000527492 PLEKHM2Q8IWE5 1019 aa5.53□□□□□ -1.52
LINC02546-201ENST00000527492 DEPDC4Q8N2C3 294 aa5.53□□□□□ -1.52
LINC02546-201ENST00000527492 ZSCAN1Q8NBB4 408 aa5.53□□□□□ -1.52
LINC02546-201ENST00000527492 ZNF784Q8NCA9 323 aaPredicted RBP5.53□□□□□ -1.52
LINC02546-201ENST00000527492 CDCA7Q9BWT1 371 aaPredicted RBP5.53□□□□□ -1.52
LINC02546-201ENST00000527492 CYLDQ9NQC7 956 aa5.53□□□□□ -1.52
LINC02546-201ENST00000527492 CFAP70Q5T0N1 1121 aa5.52□□□□□ -1.53
LINC02546-201ENST00000527492 SLC16A10Q8TF71 515 aa5.52□□□□□ -1.53
LINC02546-201ENST00000527492 ITPKCQ96DU7 683 aa5.52□□□□□ -1.53
LINC02546-201ENST00000527492 NOD1Q9Y239 953 aa5.52□□□□□ -1.53
LINC02546-201ENST00000527492 CAPN5O15484 640 aaPredicted RBP5.51□□□□□ -1.53
LINC02546-201ENST00000527492 TIMP2P16035 220 aa5.51□□□□□ -1.53
LINC02546-201ENST00000527492 GMPRP36959 345 aa5.51□□□□□ -1.53
LINC02546-201ENST00000527492 SCTRP47872 440 aa5.51□□□□□ -1.53
LINC02546-201ENST00000527492 ERVK-9P63128 1117 aa5.51□□□□□ -1.53
LINC02546-201ENST00000527492 KLF16Q9BXK1 252 aaPredicted RBP5.51□□□□□ -1.53
LINC02546-201ENST00000527492 VRTNQ9H8Y1 702 aa5.51□□□□□ -1.53
LINC02546-201ENST00000527492 MKRN1Q9UHC7 482 aaKnown RBP5.51□□□□□ -1.53
LINC02546-201ENST00000527492 ATP5J2-PTCD1G3V325 749 aa5.5□□□□□ -1.53
LINC02546-201ENST00000527492 LILRA1O75019 489 aa5.5□□□□□ -1.53
LINC02546-201ENST00000527492 TRIM50Q86XT4 487 aa5.5□□□□□ -1.53
LINC02546-201ENST00000527492 NPAS3Q8IXF0 933 aa5.5□□□□□ -1.53
LINC02546-201ENST00000527492 ZFAND3Q9H8U3 227 aa5.5□□□□□ -1.53
LINC02546-201ENST00000527492 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.49□□□□□ -1.53
LINC02546-201ENST00000527492 ATP1A2P50993 1020 aa5.49□□□□□ -1.53
LINC02546-201ENST00000527492 GTF2IP78347 998 aa5.49□□□□□ -1.53
LINC02546-201ENST00000527492 CBLBQ13191 982 aa5.49□□□□□ -1.53
LINC02546-201ENST00000527492 CYP2U1Q7Z449 544 aa5.49□□□□□ -1.53
LINC02546-201ENST00000527492 PBXIP1Q96AQ6 731 aa5.49□□□□□ -1.53
LINC02546-201ENST00000527492 NXF1Q9UBU9 619 aaKnown RBP5.49□□□□□ -1.53
LINC02546-201ENST00000527492 ADH1AP07327 375 aa5.48□□□□□ -1.53
LINC02546-201ENST00000527492 RASA1P20936 1047 aa5.48□□□□□ -1.53
LINC02546-201ENST00000527492 ADD1P35611 737 aaKnown RBP5.48□□□□□ -1.53
LINC02546-201ENST00000527492 PSME1Q06323 249 aa5.48□□□□□ -1.53
LINC02546-201ENST00000527492 CDCA8Q53HL2 280 aa5.48□□□□□ -1.53
LINC02546-201ENST00000527492 KANK4Q5T7N3 995 aaPredicted RBP5.48□□□□□ -1.53
LINC02546-201ENST00000527492 LARP1Q6PKG0 1096 aaKnown RBP5.48□□□□□ -1.53
LINC02546-201ENST00000527492 Q6ZVU0 165 aa5.48□□□□□ -1.53
LINC02546-201ENST00000527492 IRF7Q92985 503 aa5.48□□□□□ -1.53
LINC02546-201ENST00000527492 OSBPL3Q9H4L5 887 aa5.48□□□□□ -1.53
LINC02546-201ENST00000527492 ACIN1Q9UKV3 1341 aaKnown RBP5.48□□□□□ -1.53
LINC02546-201ENST00000527492 PPP1R15AO75807 674 aaPredicted RBP5.47□□□□□ -1.53
LINC02546-201ENST00000527492 UPP2O95045 317 aa5.47□□□□□ -1.53
LINC02546-201ENST00000527492 OGFOD1Q8N543 542 aa5.47□□□□□ -1.53
LINC02546-201ENST00000527492 MEIOBQ8N635 442 aa5.47□□□□□ -1.53
LINC02546-201ENST00000527492 DNAAF2Q9NVR5 837 aaKnown RBP5.47□□□□□ -1.53
LINC02546-201ENST00000527492 RBM19Q9Y4C8 960 aaKnown RBP5.47□□□□□ -1.53
LINC02546-201ENST00000527492 FAM196BA6NMK8 535 aa5.46□□□□□ -1.54
LINC02546-201ENST00000527492 H3BM21 787 aa5.46□□□□□ -1.54
LINC02546-201ENST00000527492 GNRH1P01148 92 aa5.46□□□□□ -1.54
LINC02546-201ENST00000527492 RELBQ01201 579 aa5.46□□□□□ -1.54
LINC02546-201ENST00000527492 LARGE2Q8N3Y3 721 aa5.46□□□□□ -1.54
LINC02546-201ENST00000527492 AGBL1Q96MI9 1066 aa5.46□□□□□ -1.54
LINC02546-201ENST00000527492 TSEN34Q9BSV6 310 aaKnown RBP5.46□□□□□ -1.54
LINC02546-201ENST00000527492 PCDHGA11Q9Y5H2 935 aa5.46□□□□□ -1.54
LINC02546-201ENST00000527492 USP17L15C9J2P7 530 aa5.45□□□□□ -1.54
LINC02546-201ENST00000527492 USP17L10C9JJH3 530 aa5.45□□□□□ -1.54
LINC02546-201ENST00000527492 USP17L13C9JLJ4 530 aa5.45□□□□□ -1.54
LINC02546-201ENST00000527492 USP17L12C9JPN9 530 aa5.45□□□□□ -1.54
LINC02546-201ENST00000527492 USP17L11C9JVI0 530 aa5.45□□□□□ -1.54
LINC02546-201ENST00000527492 USP17L21D6R901 530 aa5.45□□□□□ -1.54
LINC02546-201ENST00000527492 USP17L18D6R9N7 530 aa5.45□□□□□ -1.54
LINC02546-201ENST00000527492 USP17L22D6RA61 530 aa5.45□□□□□ -1.54
LINC02546-201ENST00000527492 USP17L17D6RBQ6 530 aa5.45□□□□□ -1.54
LINC02546-201ENST00000527492 USP17L19D6RCP7 530 aa5.45□□□□□ -1.54
LINC02546-201ENST00000527492 USP17L20D6RJB6 530 aa5.45□□□□□ -1.54
LINC02546-201ENST00000527492 PTGIRP43119 386 aa5.45□□□□□ -1.54
LINC02546-201ENST00000527492 SRPK2P78362 688 aaKnown RBP5.45□□□□□ -1.54
LINC02546-201ENST00000527492 CLDN10P78369 228 aa5.45□□□□□ -1.54
LINC02546-201ENST00000527492 USP17L24Q0WX57 530 aa5.45□□□□□ -1.54
LINC02546-201ENST00000527492 SCARF1Q14162 830 aa5.45□□□□□ -1.54
LINC02546-201ENST00000527492 ESCO1Q5FWF5 840 aa5.45□□□□□ -1.54
LINC02546-201ENST00000527492 MRPL14Q6P1L8 145 aaKnown RBP5.45□□□□□ -1.54
LINC02546-201ENST00000527492 LINC00528Q8N1L1 170 aa5.45□□□□□ -1.54
LINC02546-201ENST00000527492 ZNF594Q96JF6 807 aaPredicted RBP5.45□□□□□ -1.54
LINC02546-201ENST00000527492 ZBTB7BO15156 539 aaPredicted RBP5.44□□□□□ -1.54
LINC02546-201ENST00000527492 ATG7O95352 703 aa5.44□□□□□ -1.54
LINC02546-201ENST00000527492 BMP2P12643 396 aa5.44□□□□□ -1.54
LINC02546-201ENST00000527492 GDF10P55107 478 aa5.44□□□□□ -1.54
LINC02546-201ENST00000527492 PTK7Q13308 1070 aa5.44□□□□□ -1.54
LINC02546-201ENST00000527492 CRTC2Q53ET0 693 aaPredicted RBP5.44□□□□□ -1.54
LINC02546-201ENST00000527492 C6orf118Q5T5N4 469 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms