RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 NBPF4Q96M43 638 aa20.73■□□□□ 0.91
SNRNP35-204ENST00000527158 NOB1Q9ULX3 412 aaKnown RBP20.73■□□□□ 0.91
SNRNP35-204ENST00000527158 RLBP1P12271 317 aa20.73■□□□□ 0.91
SNRNP35-204ENST00000527158 ATF7IPQ6VMQ6 1270 aa20.73■□□□□ 0.91
SNRNP35-204ENST00000527158 USHBP1Q8N6Y0 703 aa20.73■□□□□ 0.91
SNRNP35-204ENST00000527158 TSPYL6Q8N831 410 aa20.73■□□□□ 0.91
SNRNP35-204ENST00000527158 GNAT3A8MTJ3 354 aa20.72■□□□□ 0.91
SNRNP35-204ENST00000527158 HAP1P54257 671 aaPredicted RBP20.72■□□□□ 0.91
SNRNP35-204ENST00000527158 BRPF1P55201 1214 aaPredicted RBP20.72■□□□□ 0.91
SNRNP35-204ENST00000527158 ELL2O00472 640 aaPredicted RBP20.72■□□□□ 0.91
SNRNP35-204ENST00000527158 BRINP3Q76B58 766 aa20.72■□□□□ 0.91
SNRNP35-204ENST00000527158 SLAIN2Q9P270 581 aa20.72■□□□□ 0.91
SNRNP35-204ENST00000527158 TNNQ9UQP3 1299 aa20.72■□□□□ 0.91
SNRNP35-204ENST00000527158 TNS3Q68CZ2 1445 aa20.71■□□□□ 0.91
SNRNP35-204ENST00000527158 C8orf58Q8NAV2 365 aa20.71■□□□□ 0.91
SNRNP35-204ENST00000527158 KDM2BQ8NHM5 1336 aa20.71■□□□□ 0.91
SNRNP35-204ENST00000527158 CRB1P82279 1406 aa20.71■□□□□ 0.91
SNRNP35-204ENST00000527158 TRIM27P14373 513 aa20.7■□□□□ 0.91
SNRNP35-204ENST00000527158 ANKRD24Q8TF21 1146 aa20.7■□□□□ 0.91
SNRNP35-204ENST00000527158 ZC3H6P61129 1189 aaKnown RBP20.7■□□□□ 0.9
SNRNP35-204ENST00000527158 MVPQ14764 893 aaKnown RBP20.7■□□□□ 0.9
SNRNP35-204ENST00000527158 SPATA31A3Q5VYP0 1347 aa20.7■□□□□ 0.9
SNRNP35-204ENST00000527158 PXDNQ92626 1479 aa20.69■□□□□ 0.9
SNRNP35-204ENST00000527158 LRRC59Q96AG4 307 aaKnown RBP20.69■□□□□ 0.9
SNRNP35-204ENST00000527158 MED1Q15648 1581 aaPredicted RBP20.69■□□□□ 0.9
SNRNP35-204ENST00000527158 MAP3K5Q99683 1374 aa20.68■□□□□ 0.9
SNRNP35-204ENST00000527158 MRPL50Q8N5N7 158 aaKnown RBP20.68■□□□□ 0.9
SNRNP35-204ENST00000527158 KIAA0232Q92628 1395 aa20.67■□□□□ 0.9
SNRNP35-204ENST00000527158 AXIN2Q9Y2T1 843 aa20.67■□□□□ 0.9
SNRNP35-204ENST00000527158 ARHGAP45Q92619 1136 aa20.66■□□□□ 0.9
SNRNP35-204ENST00000527158 TSPYL4Q9UJ04 414 aa20.66■□□□□ 0.9
SNRNP35-204ENST00000527158 TCERG1O14776 1098 aaKnown RBP20.66■□□□□ 0.9
SNRNP35-204ENST00000527158 ANP32AP39687 249 aaKnown RBP20.65■□□□□ 0.9
SNRNP35-204ENST00000527158 DDX19BQ9UMR2 479 aa20.65■□□□□ 0.9
SNRNP35-204ENST00000527158 PLEKHO1Q53GL0 409 aaPredicted RBP20.65■□□□□ 0.9
SNRNP35-204ENST00000527158 AMOTQ4VCS5 1084 aa20.64■□□□□ 0.89
SNRNP35-204ENST00000527158 ITPRIPQ8IWB1 547 aa20.64■□□□□ 0.89
SNRNP35-204ENST00000527158 CABLES1Q8TDN4 633 aa20.64■□□□□ 0.89
SNRNP35-204ENST00000527158 MIS18AQ9NYP9 233 aa20.63■□□□□ 0.89
SNRNP35-204ENST00000527158 NOP58Q9Y2X3 529 aaKnown RBP20.63■□□□□ 0.89
SNRNP35-204ENST00000527158 ERBB3P21860 1342 aa20.63■□□□□ 0.89
SNRNP35-204ENST00000527158 IL17REQ8NFR9 667 aa20.63■□□□□ 0.89
SNRNP35-204ENST00000527158 NCAPD2Q15021 1401 aa20.62■□□□□ 0.89
SNRNP35-204ENST00000527158 BABAM1Q9NWV8 329 aa20.62■□□□□ 0.89
SNRNP35-204ENST00000527158 SOS2Q07890 1332 aaPredicted RBP20.62■□□□□ 0.89
SNRNP35-204ENST00000527158 TMEM57Q8N5G2 664 aa20.62■□□□□ 0.89
SNRNP35-204ENST00000527158 IGHDP01880 384 aa20.61■□□□□ 0.89
SNRNP35-204ENST00000527158 TAF7Q15545 349 aaPredicted RBP20.61■□□□□ 0.89
SNRNP35-204ENST00000527158 KRT24Q2M2I5 525 aa20.61■□□□□ 0.89
SNRNP35-204ENST00000527158 AKAP4Q5JQC9 854 aa20.6■□□□□ 0.89
SNRNP35-204ENST00000527158 RGPD2P0DJD1 1756 aa20.59■□□□□ 0.89
SNRNP35-204ENST00000527158 ZNF530Q6P9A1 599 aaPredicted RBP20.59■□□□□ 0.89
SNRNP35-204ENST00000527158 API5Q9BZZ5 524 aaKnown RBP20.59■□□□□ 0.89
SNRNP35-204ENST00000527158 CHMP4BQ9H444 224 aaKnown RBP20.59■□□□□ 0.89
SNRNP35-204ENST00000527158 PCDHB15Q9Y5E8 787 aa20.59■□□□□ 0.89
SNRNP35-204ENST00000527158 LRRC37A3O60309 1634 aa20.58■□□□□ 0.89
SNRNP35-204ENST00000527158 RWDD1Q9H446 243 aaPredicted RBP20.58■□□□□ 0.89
SNRNP35-204ENST00000527158 NLRP2Q9NX02 1062 aa20.58■□□□□ 0.89
SNRNP35-204ENST00000527158 CPDO75976 1380 aa20.58■□□□□ 0.89
SNRNP35-204ENST00000527158 C1orf141Q5JVX7 400 aa20.58■□□□□ 0.88
SNRNP35-204ENST00000527158 IPO9Q96P70 1041 aaKnown RBP20.58■□□□□ 0.88
SNRNP35-204ENST00000527158 CSB-PGBD3P0DP91 1061 aa20.57■□□□□ 0.88
SNRNP35-204ENST00000527158 ABCC6O95255 1503 aa20.57■□□□□ 0.88
SNRNP35-204ENST00000527158 CHRNA2Q15822 529 aa20.56■□□□□ 0.88
SNRNP35-204ENST00000527158 CEMIPQ8WUJ3 1361 aa20.56■□□□□ 0.88
SNRNP35-204ENST00000527158 CAMTA1Q9Y6Y1 1673 aa20.56■□□□□ 0.88
SNRNP35-204ENST00000527158 RAPGEF4Q8WZA2 1011 aa20.55■□□□□ 0.88
SNRNP35-204ENST00000527158 RGPD5Q99666 1765 aa20.55■□□□□ 0.88
SNRNP35-204ENST00000527158 SOS1Q07889 1333 aaPredicted RBP20.54■□□□□ 0.88
SNRNP35-204ENST00000527158 ZBTB40Q9NUA8 1239 aa20.54■□□□□ 0.88
SNRNP35-204ENST00000527158 ABCC4O15439 1325 aa20.54■□□□□ 0.88
SNRNP35-204ENST00000527158 LGR6Q9HBX8 967 aa20.53■□□□□ 0.88
SNRNP35-204ENST00000527158 TEFQ10587 303 aa20.53■□□□□ 0.88
SNRNP35-204ENST00000527158 CRYBG1Q9Y4K1 1723 aa20.53■□□□□ 0.88
SNRNP35-204ENST00000527158 COL18A1P39060 1754 aa20.53■□□□□ 0.88
SNRNP35-204ENST00000527158 SKAP1Q86WV1 359 aa20.52■□□□□ 0.88
SNRNP35-204ENST00000527158 PTPRCP08575 1304 aa20.52■□□□□ 0.88
SNRNP35-204ENST00000527158 SLC4A2P04920 1241 aa20.52■□□□□ 0.88
SNRNP35-204ENST00000527158 TATP17735 454 aaPredicted RBP20.52■□□□□ 0.88
SNRNP35-204ENST00000527158 MPRIPQ6WCQ1 1025 aa20.52■□□□□ 0.88
SNRNP35-204ENST00000527158 PRDM11Q9NQV5 511 aa20.52■□□□□ 0.88
SNRNP35-204ENST00000527158 LMO7Q8WWI1 1683 aa20.51■□□□□ 0.87
SNRNP35-204ENST00000527158 STK31Q9BXU1 1019 aa20.51■□□□□ 0.87
SNRNP35-204ENST00000527158 ZBTB7BO15156 539 aaPredicted RBP20.5■□□□□ 0.87
SNRNP35-204ENST00000527158 RNMTO43148 476 aaKnown RBP20.5■□□□□ 0.87
SNRNP35-204ENST00000527158 CCDC30Q5VVM6 783 aa20.5■□□□□ 0.87
SNRNP35-204ENST00000527158 HDAC1Q13547 482 aaPredicted RBP20.49■□□□□ 0.87
SNRNP35-204ENST00000527158 SPG7Q9UQ90 795 aa20.49■□□□□ 0.87
SNRNP35-204ENST00000527158 ZBTB47Q9UFB7 747 aaPredicted RBP20.49■□□□□ 0.87
SNRNP35-204ENST00000527158 OVOS2A0A0G2JMS6 1433 aa20.49■□□□□ 0.87
SNRNP35-204ENST00000527158 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.48■□□□□ 0.87
SNRNP35-204ENST00000527158 FAM208AQ9UK61 1670 aaKnown RBP20.48■□□□□ 0.87
SNRNP35-204ENST00000527158 PLEKHG2Q9H7P9 1386 aa20.48■□□□□ 0.87
SNRNP35-204ENST00000527158 BTBD11A6QL63 1104 aa20.48■□□□□ 0.87
SNRNP35-204ENST00000527158 RGS3P49796 1198 aa20.48■□□□□ 0.87
SNRNP35-204ENST00000527158 CHMP4AQ9BY43 222 aa20.47■□□□□ 0.87
SNRNP35-204ENST00000527158 NHSL1Q5SYE7 1610 aa20.47■□□□□ 0.87
SNRNP35-204ENST00000527158 PDE4AP27815 886 aa20.46■□□□□ 0.87
SNRNP35-204ENST00000527158 INTS3Q68E01 1043 aaKnown RBP20.46■□□□□ 0.87
SNRNP35-204ENST00000527158 EIF4A1P60842 406 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms