RNA–Protein interactions for RNA: ENST00000527026.1

PTPRJ-204, Transcript of protein tyrosine phosphatase, receptor type J, humanhuman

TSL 4

Gene PTPRJ, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRJ-204ENST00000527026 KCNV2Q8TDN2 545 aa12.55□□□□□ -0.4
PTPRJ-204ENST00000527026 ZSWIM6Q9HCJ5 1215 aa12.55□□□□□ -0.4
PTPRJ-204ENST00000527026 TULP4Q9NRJ4 1543 aa12.55□□□□□ -0.4
PTPRJ-204ENST00000527026 RBM6P78332 1123 aaKnown RBP12.54□□□□□ -0.4
PTPRJ-204ENST00000527026 ABTB2Q8N961 1025 aa12.53□□□□□ -0.4
PTPRJ-204ENST00000527026 TRPC5Q9UL62 973 aaPredicted RBP12.53□□□□□ -0.4
PTPRJ-204ENST00000527026 TNS3Q68CZ2 1445 aa12.53□□□□□ -0.4
PTPRJ-204ENST00000527026 QRICH2Q9H0J4 1663 aa12.52□□□□□ -0.4
PTPRJ-204ENST00000527026 ST20-MTHFSA0A0A6YYL1 179 aa12.52□□□□□ -0.41
PTPRJ-204ENST00000527026 ARHGEF10O15013 1369 aa12.52□□□□□ -0.41
PTPRJ-204ENST00000527026 COL22A1Q8NFW1 1626 aaPredicted RBP12.51□□□□□ -0.41
PTPRJ-204ENST00000527026 GPR153Q6NV75 609 aa12.51□□□□□ -0.41
PTPRJ-204ENST00000527026 TIMELESSQ9UNS1 1208 aa12.51□□□□□ -0.41
PTPRJ-204ENST00000527026 ATP7BP35670 1465 aa12.51□□□□□ -0.41
PTPRJ-204ENST00000527026 ITSN1Q15811 1721 aa12.51□□□□□ -0.41
PTPRJ-204ENST00000527026 MARF1Q9Y4F3 1742 aaKnown RBP12.51□□□□□ -0.41
PTPRJ-204ENST00000527026 ZC3H6P61129 1189 aaKnown RBP12.5□□□□□ -0.41
PTPRJ-204ENST00000527026 UNC5CLQ8IV45 518 aa12.5□□□□□ -0.41
PTPRJ-204ENST00000527026 TMC1Q8TDI8 760 aa12.5□□□□□ -0.41
PTPRJ-204ENST00000527026 PPIP5K1Q6PFW1 1433 aa12.5□□□□□ -0.41
PTPRJ-204ENST00000527026 POLR3AO14802 1390 aaPredicted RBP12.49□□□□□ -0.41
PTPRJ-204ENST00000527026 CLSPNQ9HAW4 1339 aa12.49□□□□□ -0.41
PTPRJ-204ENST00000527026 GJD4Q96KN9 370 aaPredicted RBP12.49□□□□□ -0.41
PTPRJ-204ENST00000527026 EMILIN3Q9NT22 766 aa12.49□□□□□ -0.41
PTPRJ-204ENST00000527026 TRPM3Q9HCF6 1732 aaPredicted RBP12.48□□□□□ -0.41
PTPRJ-204ENST00000527026 PTGER2P43116 358 aa12.48□□□□□ -0.41
PTPRJ-204ENST00000527026 NLRP13Q86W25 1043 aa12.48□□□□□ -0.41
PTPRJ-204ENST00000527026 SLC12A5Q9H2X9 1139 aa12.48□□□□□ -0.41
PTPRJ-204ENST00000527026 CCDC9Q9Y3X0 531 aaKnown RBP12.48□□□□□ -0.41
PTPRJ-204ENST00000527026 BCL9LQ86UU0 1499 aa12.47□□□□□ -0.41
PTPRJ-204ENST00000527026 CHRNA2Q15822 529 aa12.47□□□□□ -0.41
PTPRJ-204ENST00000527026 ARHGEF1Q92888 912 aaKnown RBP12.47□□□□□ -0.41
PTPRJ-204ENST00000527026 BTG4Q9NY30 223 aa12.47□□□□□ -0.41
PTPRJ-204ENST00000527026 ARIH1Q9Y4X5 557 aaPredicted RBP12.47□□□□□ -0.41
PTPRJ-204ENST00000527026 RALGAPBQ86X10 1494 aa12.46□□□□□ -0.41
PTPRJ-204ENST00000527026 ALS2Q96Q42 1657 aa12.46□□□□□ -0.41
PTPRJ-204ENST00000527026 TESK2Q96S53 571 aa12.46□□□□□ -0.41
PTPRJ-204ENST00000527026 GCP02774 474 aa12.45□□□□□ -0.42
PTPRJ-204ENST00000527026 PRDM11Q9NQV5 511 aa12.45□□□□□ -0.42
PTPRJ-204ENST00000527026 TTC21BQ7Z4L5 1316 aa12.44□□□□□ -0.42
PTPRJ-204ENST00000527026 ZBTB7CA1YPR0 619 aa12.44□□□□□ -0.42
PTPRJ-204ENST00000527026 EVA1CP58658 441 aa12.44□□□□□ -0.42
PTPRJ-204ENST00000527026 VPS72Q15906 364 aa12.44□□□□□ -0.42
PTPRJ-204ENST00000527026 ARSIQ5FYB1 569 aa12.44□□□□□ -0.42
PTPRJ-204ENST00000527026 ANKRD13DQ6ZTN6 518 aa12.44□□□□□ -0.42
PTPRJ-204ENST00000527026 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.44□□□□□ -0.42
PTPRJ-204ENST00000527026 ATRNO75882 1429 aa12.44□□□□□ -0.42
PTPRJ-204ENST00000527026 SLIT2O94813 1529 aa12.43□□□□□ -0.42
PTPRJ-204ENST00000527026 TOPAZ1Q8N9V7 1692 aa12.43□□□□□ -0.42
PTPRJ-204ENST00000527026 SLC34A2O95436 690 aa12.43□□□□□ -0.42
PTPRJ-204ENST00000527026 UPF1Q92900 1129 aaKnown RBP eCLIP12.43□□□□□ -0.42
PTPRJ-204ENST00000527026 PUS7Q96PZ0 661 aaKnown RBP12.43□□□□□ -0.42
PTPRJ-204ENST00000527026 ATAD2Q6PL18 1390 aa12.43□□□□□ -0.42
PTPRJ-204ENST00000527026 HDGFL2Q7Z4V5 671 aaPredicted RBP12.42□□□□□ -0.42
PTPRJ-204ENST00000527026 OXER1Q8TDS5 423 aa12.42□□□□□ -0.42
PTPRJ-204ENST00000527026 STRN4Q9NRL3 753 aa12.42□□□□□ -0.42
PTPRJ-204ENST00000527026 KTN1Q86UP2 1357 aaKnown RBP12.42□□□□□ -0.42
PTPRJ-204ENST00000527026 KIAA0232Q92628 1395 aa12.42□□□□□ -0.42
PTPRJ-204ENST00000527026 SBNO2Q9Y2G9 1366 aa12.42□□□□□ -0.42
PTPRJ-204ENST00000527026 TMF1P82094 1093 aa12.41□□□□□ -0.42
PTPRJ-204ENST00000527026 SEPT12Q8IYM1 358 aa12.41□□□□□ -0.42
PTPRJ-204ENST00000527026 BRD4O60885 1362 aaPredicted RBP12.41□□□□□ -0.42
PTPRJ-204ENST00000527026 USP6P35125 1406 aa12.4□□□□□ -0.42
PTPRJ-204ENST00000527026 ONECUT3O60422 494 aaPredicted RBP12.4□□□□□ -0.42
PTPRJ-204ENST00000527026 PTCD2Q8WV60 388 aaKnown RBP12.4□□□□□ -0.42
PTPRJ-204ENST00000527026 TERF2IPQ9NYB0 399 aa12.4□□□□□ -0.42
PTPRJ-204ENST00000527026 USP47Q96K76 1375 aa12.4□□□□□ -0.42
PTPRJ-204ENST00000527026 ABCA3Q99758 1704 aa12.4□□□□□ -0.43
PTPRJ-204ENST00000527026 KAT6BQ8WYB5 2073 aa12.39□□□□□ -0.43
PTPRJ-204ENST00000527026 DPYSL4O14531 572 aa12.39□□□□□ -0.43
PTPRJ-204ENST00000527026 FAM98CQ17RN3 349 aaKnown RBP12.39□□□□□ -0.43
PTPRJ-204ENST00000527026 CDK12Q9NYV4 1490 aaPredicted RBP12.39□□□□□ -0.43
PTPRJ-204ENST00000527026 AKAP12Q02952 1782 aa12.38□□□□□ -0.43
PTPRJ-204ENST00000527026 RGS12O14924 1447 aa12.38□□□□□ -0.43
PTPRJ-204ENST00000527026 CPSF1Q10570 1443 aaKnown RBP12.38□□□□□ -0.43
PTPRJ-204ENST00000527026 SSH2Q76I76 1423 aa12.38□□□□□ -0.43
PTPRJ-204ENST00000527026 A0A0G2JS52 829 aa12.38□□□□□ -0.43
PTPRJ-204ENST00000527026 MYT1Q01538 1121 aa12.38□□□□□ -0.43
PTPRJ-204ENST00000527026 NME9Q86XW9 330 aa12.38□□□□□ -0.43
PTPRJ-204ENST00000527026 USP35Q9P2H5 1018 aa12.38□□□□□ -0.43
PTPRJ-204ENST00000527026 USP19O94966 1318 aa12.37□□□□□ -0.43
PTPRJ-204ENST00000527026 TTC21AQ8NDW8 1320 aa12.37□□□□□ -0.43
PTPRJ-204ENST00000527026 NWD2Q9ULI1 1742 aa12.37□□□□□ -0.43
PTPRJ-204ENST00000527026 BRWD3Q6RI45 1802 aa12.37□□□□□ -0.43
PTPRJ-204ENST00000527026 ZNF316A6NFI3 1004 aaPredicted RBP12.37□□□□□ -0.43
PTPRJ-204ENST00000527026 KHSRPQ92945 711 aaKnown RBP eCLIP12.37□□□□□ -0.43
PTPRJ-204ENST00000527026 POLR3GLQ9BT43 218 aa12.37□□□□□ -0.43
PTPRJ-204ENST00000527026 PLCH1Q4KWH8 1693 aa12.37□□□□□ -0.43
PTPRJ-204ENST00000527026 COL14A1Q05707 1796 aaKnown RBP12.37□□□□□ -0.43
PTPRJ-204ENST00000527026 CRYBG1Q9Y4K1 1723 aa12.37□□□□□ -0.43
PTPRJ-204ENST00000527026 SPATA31A5Q5VU36 1347 aa12.37□□□□□ -0.43
PTPRJ-204ENST00000527026 SPATA31A7Q8IWB4 1347 aa12.37□□□□□ -0.43
PTPRJ-204ENST00000527026 HSPA5P11021 654 aaKnown RBP12.36□□□□□ -0.43
PTPRJ-204ENST00000527026 MAP3K9P80192 1104 aa12.36□□□□□ -0.43
PTPRJ-204ENST00000527026 CDCA8Q53HL2 280 aa12.36□□□□□ -0.43
PTPRJ-204ENST00000527026 LARP1Q6PKG0 1096 aaKnown RBP12.36□□□□□ -0.43
PTPRJ-204ENST00000527026 KCNH5Q8NCM2 988 aa12.36□□□□□ -0.43
PTPRJ-204ENST00000527026 AXIN2Q9Y2T1 843 aa12.36□□□□□ -0.43
PTPRJ-204ENST00000527026 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.36□□□□□ -0.43
PTPRJ-204ENST00000527026 EIF4G2P78344 907 aaKnown RBP eCLIP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms