RNA–Protein interactions for RNA: ENST00000526960.1

PTP4A2-209, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-209ENST00000526960 GOLGB1Q14789 3259 aaKnown RBP20.31■□□□□ 0.84
PTP4A2-209ENST00000526960 AMPHP49418 695 aa20.31■□□□□ 0.84
PTP4A2-209ENST00000526960 C1QTNF8P60827 252 aa20.31■□□□□ 0.84
PTP4A2-209ENST00000526960 ST20-MTHFSA0A0A6YYL1 179 aa20.3■□□□□ 0.84
PTP4A2-209ENST00000526960 COL24A1Q17RW2 1714 aa20.3■□□□□ 0.84
PTP4A2-209ENST00000526960 QSER1Q2KHR3 1735 aa20.3■□□□□ 0.84
PTP4A2-209ENST00000526960 FAM208AQ9UK61 1670 aaKnown RBP20.29■□□□□ 0.84
PTP4A2-209ENST00000526960 SYTL4Q96C24 671 aaPredicted RBP20.28■□□□□ 0.84
PTP4A2-209ENST00000526960 NSD2O96028 1365 aa20.28■□□□□ 0.84
PTP4A2-209ENST00000526960 TONSLQ96HA7 1378 aa20.28■□□□□ 0.84
PTP4A2-209ENST00000526960 RTL1A6NKG5 1358 aa20.26■□□□□ 0.83
PTP4A2-209ENST00000526960 FYB1O15117 783 aa20.26■□□□□ 0.83
PTP4A2-209ENST00000526960 FBLN1P23142 703 aa20.26■□□□□ 0.83
PTP4A2-209ENST00000526960 NBPF6Q5VWK0 638 aa20.26■□□□□ 0.83
PTP4A2-209ENST00000526960 NBPF4Q96M43 638 aa20.26■□□□□ 0.83
PTP4A2-209ENST00000526960 KCNQ4P56696 695 aa20.25■□□□□ 0.83
PTP4A2-209ENST00000526960 CCNL1Q9UK58 526 aaPredicted RBP20.25■□□□□ 0.83
PTP4A2-209ENST00000526960 GRIN3BO60391 1043 aa20.24■□□□□ 0.83
PTP4A2-209ENST00000526960 COL23A1Q86Y22 540 aaPredicted RBP20.23■□□□□ 0.83
PTP4A2-209ENST00000526960 USP47Q96K76 1375 aa20.22■□□□□ 0.83
PTP4A2-209ENST00000526960 FLAD1Q8NFF5 587 aa20.22■□□□□ 0.83
PTP4A2-209ENST00000526960 RAPGEF4Q8WZA2 1011 aa20.22■□□□□ 0.83
PTP4A2-209ENST00000526960 LY75O60449 1722 aa20.22■□□□□ 0.83
PTP4A2-209ENST00000526960 NLGN2Q8NFZ4 835 aa20.21■□□□□ 0.83
PTP4A2-209ENST00000526960 MEGF6O75095 1541 aa20.21■□□□□ 0.83
PTP4A2-209ENST00000526960 KIF24Q5T7B8 1368 aa20.21■□□□□ 0.83
PTP4A2-209ENST00000526960 TATP17735 454 aaPredicted RBP20.2■□□□□ 0.82
PTP4A2-209ENST00000526960 RRS1Q15050 365 aaKnown RBP20.2■□□□□ 0.82
PTP4A2-209ENST00000526960 INSRP06213 1382 aa20.2■□□□□ 0.82
PTP4A2-209ENST00000526960 SENP3-EIF4A1A0A087X0R7 540 aa20.19■□□□□ 0.82
PTP4A2-209ENST00000526960 CD2APQ9Y5K6 639 aa20.19■□□□□ 0.82
PTP4A2-209ENST00000526960 TMF1P82094 1093 aa20.18■□□□□ 0.82
PTP4A2-209ENST00000526960 KLHL34Q8N239 644 aa20.18■□□□□ 0.82
PTP4A2-209ENST00000526960 GGNBP2Q9H3C7 697 aa20.18■□□□□ 0.82
PTP4A2-209ENST00000526960 GIGYF1O75420 1035 aaPredicted RBP20.17■□□□□ 0.82
PTP4A2-209ENST00000526960 HSP90AB2PQ58FF8 381 aa20.17■□□□□ 0.82
PTP4A2-209ENST00000526960 YBX3P16989 372 aaKnown RBP eCLIP20.16■□□□□ 0.82
PTP4A2-209ENST00000526960 CDCA8Q53HL2 280 aa20.16■□□□□ 0.82
PTP4A2-209ENST00000526960 PCDH11XQ9BZA7 1347 aa20.16■□□□□ 0.82
PTP4A2-209ENST00000526960 PCDH11YQ9BZA8 1340 aa20.16■□□□□ 0.82
PTP4A2-209ENST00000526960 SMG6Q86US8 1419 aaKnown RBP20.16■□□□□ 0.82
PTP4A2-209ENST00000526960 SHANK3Q9BYB0 1731 aa20.16■□□□□ 0.82
PTP4A2-209ENST00000526960 MSH5O43196 834 aa20.15■□□□□ 0.82
PTP4A2-209ENST00000526960 PELP1Q8IZL8 1130 aaKnown RBP20.15■□□□□ 0.82
PTP4A2-209ENST00000526960 SMARCC1Q92922 1105 aaPredicted RBP20.15■□□□□ 0.82
PTP4A2-209ENST00000526960 DOT1LQ8TEK3 1739 aa20.15■□□□□ 0.82
PTP4A2-209ENST00000526960 RGPD2P0DJD1 1756 aa20.14■□□□□ 0.81
PTP4A2-209ENST00000526960 NKX1-1Q15270 411 aaPredicted RBP20.14■□□□□ 0.81
PTP4A2-209ENST00000526960 USHBP1Q8N6Y0 703 aa20.14■□□□□ 0.81
PTP4A2-209ENST00000526960 TUBGCP6Q96RT7 1819 aa20.13■□□□□ 0.81
PTP4A2-209ENST00000526960 FLT4P35916 1363 aa20.13■□□□□ 0.81
PTP4A2-209ENST00000526960 CYP27B1O15528 508 aa20.13■□□□□ 0.81
PTP4A2-209ENST00000526960 PALLDQ8WX93 1383 aa20.11■□□□□ 0.81
PTP4A2-209ENST00000526960 MPRIPQ6WCQ1 1025 aa20.11■□□□□ 0.81
PTP4A2-209ENST00000526960 CEP350Q5VT06 3117 aa20.1■□□□□ 0.81
PTP4A2-209ENST00000526960 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.1■□□□□ 0.81
PTP4A2-209ENST00000526960 CARD14Q9BXL6 1004 aa20.09■□□□□ 0.81
PTP4A2-209ENST00000526960 MSL1Q68DK7 614 aa20.08■□□□□ 0.81
PTP4A2-209ENST00000526960 PIGBQ92521 554 aa20.08■□□□□ 0.81
PTP4A2-209ENST00000526960 SPG7Q9UQ90 795 aa20.07■□□□□ 0.8
PTP4A2-209ENST00000526960 NCAPD2Q15021 1401 aa20.07■□□□□ 0.8
PTP4A2-209ENST00000526960 WASHC2AQ641Q2 1341 aa20.06■□□□□ 0.8
PTP4A2-209ENST00000526960 NSD3Q9BZ95 1437 aa20.05■□□□□ 0.8
PTP4A2-209ENST00000526960 SSFA2P28290 1259 aa20.05■□□□□ 0.8
PTP4A2-209ENST00000526960 AK7Q96M32 723 aa20.05■□□□□ 0.8
PTP4A2-209ENST00000526960 CCER1Q8TC90 406 aaPredicted RBP20.04■□□□□ 0.8
PTP4A2-209ENST00000526960 EMILIN1Q9Y6C2 1016 aa20.04■□□□□ 0.8
PTP4A2-209ENST00000526960 C5P01031 1676 aa20.03■□□□□ 0.8
PTP4A2-209ENST00000526960 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.03■□□□□ 0.8
PTP4A2-209ENST00000526960 LOC102724428A0A0B4J2F2 783 aa20.03■□□□□ 0.8
PTP4A2-209ENST00000526960 SIK1P57059 783 aa20.03■□□□□ 0.8
PTP4A2-209ENST00000526960 AMIGO3Q86WK7 504 aa20.03■□□□□ 0.8
PTP4A2-209ENST00000526960 TAF1LQ8IZX4 1826 aa20.02■□□□□ 0.8
PTP4A2-209ENST00000526960 EYA1Q99502 592 aa20.01■□□□□ 0.79
PTP4A2-209ENST00000526960 TIMELESSQ9UNS1 1208 aa20.01■□□□□ 0.79
PTP4A2-209ENST00000526960 ATP10DQ9P241 1426 aa20.01■□□□□ 0.79
PTP4A2-209ENST00000526960 ADCY9O60503 1353 aa20■□□□□ 0.79
PTP4A2-209ENST00000526960 PLEKHG2Q9H7P9 1386 aa20■□□□□ 0.79
PTP4A2-209ENST00000526960 IFNL2Q8IZJ0 200 aa20■□□□□ 0.79
PTP4A2-209ENST00000526960 GPBP1L1Q9HC44 474 aaPredicted RBP20■□□□□ 0.79
PTP4A2-209ENST00000526960 C4BP0C0L5 1744 aa19.99■□□□□ 0.79
PTP4A2-209ENST00000526960 LINC00116Q8NCU8 138 aa19.99■□□□□ 0.79
PTP4A2-209ENST00000526960 TMOD3Q9NYL9 352 aa19.99■□□□□ 0.79
PTP4A2-209ENST00000526960 ITGB4P16144 1822 aa19.98■□□□□ 0.79
PTP4A2-209ENST00000526960 PHKG2P15735 406 aa19.98■□□□□ 0.79
PTP4A2-209ENST00000526960 POLKQ9UBT6 870 aa19.98■□□□□ 0.79
PTP4A2-209ENST00000526960 IGSF1Q8N6C5 1336 aa19.98■□□□□ 0.79
PTP4A2-209ENST00000526960 PKD1L3Q7Z443 1732 aa19.97■□□□□ 0.79
PTP4A2-209ENST00000526960 ASAP1Q9ULH1 1129 aa19.97■□□□□ 0.79
PTP4A2-209ENST00000526960 PPM1GO15355 546 aaPredicted RBP19.96■□□□□ 0.79
PTP4A2-209ENST00000526960 ATP6V1AP38606 617 aa19.96■□□□□ 0.79
PTP4A2-209ENST00000526960 ITPK1Q13572 414 aa19.96■□□□□ 0.79
PTP4A2-209ENST00000526960 IFFO2Q5TF58 517 aa19.96■□□□□ 0.79
PTP4A2-209ENST00000526960 MAP2P11137 1827 aaKnown RBP19.96■□□□□ 0.79
PTP4A2-209ENST00000526960 KIF20BQ96Q89 1820 aa19.96■□□□□ 0.79
PTP4A2-209ENST00000526960 UBR3Q6ZT12 1888 aa19.95■□□□□ 0.78
PTP4A2-209ENST00000526960 PHF14O94880 888 aa19.95■□□□□ 0.78
PTP4A2-209ENST00000526960 ATG3Q9NT62 314 aa19.95■□□□□ 0.78
PTP4A2-209ENST00000526960 TOGARAM1Q9Y4F4 1720 aa19.95■□□□□ 0.78
PTP4A2-209ENST00000526960 ERVV-2B6SEH9 535 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms