RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 FAM83GA6ND36 823 aa26.55■■□□□ 1.84
SMCO4-203ENST00000526869 GNAT3A8MTJ3 354 aa26.55■■□□□ 1.84
SMCO4-203ENST00000526869 CHRNA2Q15822 529 aa26.55■■□□□ 1.84
SMCO4-203ENST00000526869 EXOSC9Q06265 439 aaKnown RBP26.54■■□□□ 1.84
SMCO4-203ENST00000526869 PLEKHO1Q53GL0 409 aaPredicted RBP26.54■■□□□ 1.84
SMCO4-203ENST00000526869 ZNF428Q96B54 188 aa26.53■■□□□ 1.84
SMCO4-203ENST00000526869 COL5A2P05997 1499 aaPredicted RBP26.53■■□□□ 1.84
SMCO4-203ENST00000526869 RARSP54136 660 aaKnown RBP26.52■■□□□ 1.84
SMCO4-203ENST00000526869 COL14A1Q05707 1796 aaKnown RBP26.51■■□□□ 1.83
SMCO4-203ENST00000526869 WDR17Q8IZU2 1322 aa26.51■■□□□ 1.83
SMCO4-203ENST00000526869 DCTN1Q14203 1278 aa26.51■■□□□ 1.83
SMCO4-203ENST00000526869 NLRP2Q9NX02 1062 aa26.51■■□□□ 1.83
SMCO4-203ENST00000526869 OVOS2A0A0G2JMS6 1433 aa26.5■■□□□ 1.83
SMCO4-203ENST00000526869 CHL1O00533 1208 aa26.5■■□□□ 1.83
SMCO4-203ENST00000526869 CSB-PGBD3P0DP91 1061 aa26.5■■□□□ 1.83
SMCO4-203ENST00000526869 MCM10Q7L590 875 aa26.5■■□□□ 1.83
SMCO4-203ENST00000526869 MBIPQ9NS73 344 aa26.5■■□□□ 1.83
SMCO4-203ENST00000526869 PPP4R2Q9NY27 417 aa26.5■■□□□ 1.83
SMCO4-203ENST00000526869 LAS1LQ9Y4W2 734 aaKnown RBP26.49■■□□□ 1.83
SMCO4-203ENST00000526869 BABAM1Q9NWV8 329 aa26.48■■□□□ 1.83
SMCO4-203ENST00000526869 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.48■■□□□ 1.83
SMCO4-203ENST00000526869 UBAP1LF5GYI3 381 aa26.47■■□□□ 1.83
SMCO4-203ENST00000526869 AKAP4Q5JQC9 854 aa26.47■■□□□ 1.83
SMCO4-203ENST00000526869 RAPGEF4Q8WZA2 1011 aa26.47■■□□□ 1.83
SMCO4-203ENST00000526869 CEMIPQ8WUJ3 1361 aa26.46■■□□□ 1.83
SMCO4-203ENST00000526869 PKD1L3Q7Z443 1732 aa26.46■■□□□ 1.83
SMCO4-203ENST00000526869 BCAR3O75815 825 aa26.46■■□□□ 1.83
SMCO4-203ENST00000526869 ADAMTS7Q9UKP4 1686 aa26.45■■□□□ 1.82
SMCO4-203ENST00000526869 TATP17735 454 aaPredicted RBP26.45■■□□□ 1.82
SMCO4-203ENST00000526869 ZNF530Q6P9A1 599 aaPredicted RBP26.45■■□□□ 1.82
SMCO4-203ENST00000526869 PARP4Q9UKK3 1724 aaKnown RBP26.45■■□□□ 1.82
SMCO4-203ENST00000526869 PLIN1O60240 522 aa26.44■■□□□ 1.82
SMCO4-203ENST00000526869 ALDH1L2Q3SY69 923 aa26.44■■□□□ 1.82
SMCO4-203ENST00000526869 MEGF6O75095 1541 aa26.44■■□□□ 1.82
SMCO4-203ENST00000526869 PIP4K2BP78356 416 aa26.42■■□□□ 1.82
SMCO4-203ENST00000526869 PDE3AQ14432 1141 aa26.42■■□□□ 1.82
SMCO4-203ENST00000526869 C1orf141Q5JVX7 400 aa26.42■■□□□ 1.82
SMCO4-203ENST00000526869 IL17REQ8NFR9 667 aa26.42■■□□□ 1.82
SMCO4-203ENST00000526869 CERKQ8TCT0 537 aa26.42■■□□□ 1.82
SMCO4-203ENST00000526869 CARD10Q9BWT7 1032 aa26.42■■□□□ 1.82
SMCO4-203ENST00000526869 SPG7Q9UQ90 795 aa26.41■■□□□ 1.82
SMCO4-203ENST00000526869 BRPF1P55201 1214 aaPredicted RBP26.4■■□□□ 1.82
SMCO4-203ENST00000526869 VAMP4O75379 141 aa26.39■■□□□ 1.82
SMCO4-203ENST00000526869 TAF7Q15545 349 aaPredicted RBP26.38■■□□□ 1.81
SMCO4-203ENST00000526869 TOM1L2Q6ZVM7 507 aa26.38■■□□□ 1.81
SMCO4-203ENST00000526869 SMC4Q9NTJ3 1288 aa26.38■■□□□ 1.81
SMCO4-203ENST00000526869 TWISTNBQ3B726 338 aaPredicted RBP26.37■■□□□ 1.81
SMCO4-203ENST00000526869 SSH1Q8WYL5 1049 aa26.37■■□□□ 1.81
SMCO4-203ENST00000526869 TSPYL4Q9UJ04 414 aa26.37■■□□□ 1.81
SMCO4-203ENST00000526869 SOS1Q07889 1333 aaPredicted RBP26.37■■□□□ 1.81
SMCO4-203ENST00000526869 KIF16BQ96L93 1317 aa26.37■■□□□ 1.81
SMCO4-203ENST00000526869 C8orf58Q8NAV2 365 aa26.36■■□□□ 1.81
SMCO4-203ENST00000526869 EXOC6Q8TAG9 804 aa26.36■■□□□ 1.81
SMCO4-203ENST00000526869 VIRMAQ69YN4 1812 aaKnown RBP26.36■■□□□ 1.81
SMCO4-203ENST00000526869 MS4A1P11836 297 aa26.35■■□□□ 1.81
SMCO4-203ENST00000526869 CANXP27824 592 aaKnown RBP26.35■■□□□ 1.81
SMCO4-203ENST00000526869 EVA1CP58658 441 aa26.35■■□□□ 1.81
SMCO4-203ENST00000526869 C20orf194Q5TEA3 1177 aa26.35■■□□□ 1.81
SMCO4-203ENST00000526869 CRBNQ96SW2 442 aa26.35■■□□□ 1.81
SMCO4-203ENST00000526869 PLCH1Q4KWH8 1693 aa26.34■■□□□ 1.81
SMCO4-203ENST00000526869 KDM3BQ7LBC6 1761 aa26.34■■□□□ 1.81
SMCO4-203ENST00000526869 RNMTO43148 476 aaKnown RBP26.34■■□□□ 1.81
SMCO4-203ENST00000526869 TSPYL6Q8N831 410 aa26.34■■□□□ 1.81
SMCO4-203ENST00000526869 BTG4Q9NY30 223 aa26.33■■□□□ 1.81
SMCO4-203ENST00000526869 SIPA1L3O60292 1781 aaPredicted RBP26.33■■□□□ 1.8
SMCO4-203ENST00000526869 SCN11AQ9UI33 1791 aa26.33■■□□□ 1.8
SMCO4-203ENST00000526869 ZKSCAN2Q63HK3 967 aa26.32■■□□□ 1.8
SMCO4-203ENST00000526869 LARP1Q6PKG0 1096 aaKnown RBP26.32■■□□□ 1.8
SMCO4-203ENST00000526869 BCL2L13Q9BXK5 485 aa26.32■■□□□ 1.8
SMCO4-203ENST00000526869 JCADQ9P266 1359 aa26.32■■□□□ 1.8
SMCO4-203ENST00000526869 PHKG2P15735 406 aa26.31■■□□□ 1.8
SMCO4-203ENST00000526869 IFNL2Q8IZJ0 200 aa26.31■■□□□ 1.8
SMCO4-203ENST00000526869 FRAT1Q92837 279 aaPredicted RBP26.31■■□□□ 1.8
SMCO4-203ENST00000526869 LGR6Q9HBX8 967 aa26.31■■□□□ 1.8
SMCO4-203ENST00000526869 STRN4Q9NRL3 753 aa26.31■■□□□ 1.8
SMCO4-203ENST00000526869 NRAPQ86VF7 1730 aa26.31■■□□□ 1.8
SMCO4-203ENST00000526869 NWD2Q9ULI1 1742 aa26.31■■□□□ 1.8
SMCO4-203ENST00000526869 IPO8O15397 1037 aaKnown RBP26.3■■□□□ 1.8
SMCO4-203ENST00000526869 HSP90AB1P08238 724 aaKnown RBP26.3■■□□□ 1.8
SMCO4-203ENST00000526869 TEFQ10587 303 aa26.3■■□□□ 1.8
SMCO4-203ENST00000526869 MRC1P22897 1456 aa26.3■■□□□ 1.8
SMCO4-203ENST00000526869 IL2RBP14784 551 aa26.29■■□□□ 1.8
SMCO4-203ENST00000526869 MPRIPQ6WCQ1 1025 aa26.29■■□□□ 1.8
SMCO4-203ENST00000526869 MRPL50Q8N5N7 158 aaKnown RBP26.28■■□□□ 1.8
SMCO4-203ENST00000526869 KDM6AO15550 1401 aaPredicted RBP26.28■■□□□ 1.8
SMCO4-203ENST00000526869 AAMPQ13685 434 aa26.27■■□□□ 1.8
SMCO4-203ENST00000526869 ARHGAP45Q92619 1136 aa26.27■■□□□ 1.8
SMCO4-203ENST00000526869 MIS18AQ9NYP9 233 aa26.27■■□□□ 1.8
SMCO4-203ENST00000526869 PCDH11XQ9BZA7 1347 aa26.27■■□□□ 1.8
SMCO4-203ENST00000526869 PCDH11YQ9BZA8 1340 aa26.27■■□□□ 1.8
SMCO4-203ENST00000526869 ATF7IPQ6VMQ6 1270 aa26.26■■□□□ 1.79
SMCO4-203ENST00000526869 ZCRB1Q8TBF4 217 aaKnown RBP26.26■■□□□ 1.79
SMCO4-203ENST00000526869 DISP2A7MBM2 1401 aa26.25■■□□□ 1.79
SMCO4-203ENST00000526869 ELL2O00472 640 aaPredicted RBP26.25■■□□□ 1.79
SMCO4-203ENST00000526869 DCAF5Q96JK2 942 aa26.25■■□□□ 1.79
SMCO4-203ENST00000526869 CCDC136Q96JN2 1154 aa26.25■■□□□ 1.79
SMCO4-203ENST00000526869 SHANK3Q9BYB0 1731 aa26.25■■□□□ 1.79
SMCO4-203ENST00000526869 WNK3Q9BYP7 1800 aa26.24■■□□□ 1.79
SMCO4-203ENST00000526869 CYP27B1O15528 508 aa26.24■■□□□ 1.79
SMCO4-203ENST00000526869 SLIT2O94813 1529 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms